Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3552
Gene name
LocationContig_1938:285..2019
Strand-
Gene length (bp)1734
Transcript length (bp)1512
Coding sequence length (bp)1512
Protein length (aa) 504

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01896 DNA_primase_S DNA primase small subunit 9.1E-64 188 418

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14215|PRI1_SCHPO DNA primase small subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pri1 PE=1 SV=1 76 503 8.0E-164
sp|P20664|PRI1_MOUSE DNA primase small subunit OS=Mus musculus GN=Prim1 PE=1 SV=1 86 483 2.0E-114
sp|P49642|PRI1_HUMAN DNA primase small subunit OS=Homo sapiens GN=PRIM1 PE=1 SV=1 89 483 5.0E-114
sp|P10363|PRI1_YEAST DNA primase small subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRI1 PE=1 SV=2 92 499 7.0E-111
sp|Q24317|PRI1_DROME DNA primase small subunit OS=Drosophila melanogaster GN=DNApol-alpha50 PE=2 SV=2 67 493 7.0E-95
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Swissprot ID Swissprot Description Start End E-value
sp|O14215|PRI1_SCHPO DNA primase small subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pri1 PE=1 SV=1 76 503 8.0E-164
sp|P20664|PRI1_MOUSE DNA primase small subunit OS=Mus musculus GN=Prim1 PE=1 SV=1 86 483 2.0E-114
sp|P49642|PRI1_HUMAN DNA primase small subunit OS=Homo sapiens GN=PRIM1 PE=1 SV=1 89 483 5.0E-114
sp|P10363|PRI1_YEAST DNA primase small subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRI1 PE=1 SV=2 92 499 7.0E-111
sp|Q24317|PRI1_DROME DNA primase small subunit OS=Drosophila melanogaster GN=DNApol-alpha50 PE=2 SV=2 67 493 7.0E-95
sp|Q25998|PRI1_PLAFK DNA primase small subunit OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=1 95 484 4.0E-76
sp|Q7KQM1|PRI1_PLAF7 DNA primase small subunit OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0366 PE=3 SV=1 95 484 4.0E-76
sp|P34471|PRI1_CAEEL DNA primase small subunit OS=Caenorhabditis elegans GN=pri-1 PE=3 SV=1 89 484 1.0E-66
sp|O29516|PRIS_ARCFU DNA primase small subunit PriS OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=priS PE=3 SV=2 119 271 2.0E-06
sp|A3MUU9|PRIS_PYRCJ DNA primase small subunit PriS OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=priS PE=3 SV=1 108 272 4.0E-06
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GO

GO Term Description Terminal node
GO:0003896 DNA primase activity Yes
GO:0006269 DNA replication, synthesis of RNA primer Yes
GO:0008152 metabolic process No
GO:0097747 RNA polymerase activity No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0009987 cellular process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003899 DNA-directed 5'-3' RNA polymerase activity No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0003824 catalytic activity No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0016772 transferase activity, transferring phosphorus-containing groups No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0090304 nucleic acid metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0140098 catalytic activity, acting on RNA No
GO:0016779 nucleotidyltransferase activity No
GO:1901360 organic cyclic compound metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0044238 primary metabolic process No
GO:0034062 5'-3' RNA polymerase activity No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0016740 transferase activity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.4287 0.8421 0.068 0.0594 0.293 0.0015 0.0483 0.0349 0.0155 0.0005

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5145
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7804
Ophiocordyceps australis map64 (Brazil) OphauB2|1835
Ophiocordyceps camponoti-rufipedis Ophun1|3209
Ophiocordyceps kimflemingae Ophio5|411
Ophiocordyceps subramaniannii Hirsu2|3552 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3552
MPHPVAAEPGRRPPDAVDEAAMDEDGRAPGEDGRALPGEAGRQVALDDLFADVDSDDDFLDDAPAEEAAVKEEEE
DGSEAGPALRASDPEVMRSFYQRLFPWRQLFQWLNHGPSPSNDFANREFAFTLQNDAYLRYQSFATADLLRKDVL
RLMPSRFEIGPVYSTNPRDRKTLRNSSAFRPLAKELCFDIDLTDYDDVRTCCDKANICAKCWRFVTMAIKVVDAA
LRHDFGFAHILWVYSGRRGAHAWVCDRKARALDDPKRKAIAGYLEVVRGGAQSGKKVNVRRPLHPHLSRSLDILK
AHFQEDVLVTQDPWASNEQAERLLQLLPDRTLNESLRRKWAATPGRDSAAKWADIDAAAKAGASKQLVPRALLEA
KQDVVLEYTYPRLDIEVSKKLNHLLKSPFVVHPGTGRVCVPIDAARPDDFDPLAVPTVQGLLAEIDAWQADAAGD
EADADAKKGGPADWEKTSLRPYVDYFRAFVAALMRDEREVRVKRERDEDSMEF*
Coding >Hirsu2|3552
ATGCCGCACCCGGTAGCCGCGGAGCCGGGGCGGCGCCCGCCCGACGCGGTCGACGAGGCGGCGATGGACGAGGAC
GGTCGCGCGCCGGGAGAGGACGGTCGCGCACTGCCTGGCGAGGCCGGGAGGCAGGTCGCGCTGGACGATCTGTTC
GCCGACGTCGACTCGGACGATGACTTTCTTGACGACGCGCCCGCGGAGGAGGCGGCGGTGAAGGAGGAGGAGGAG
GATGGCTCGGAGGCGGGGCCGGCGCTCCGGGCGTCGGACCCGGAGGTCATGCGCAGCTTCTACCAGCGGCTCTTC
CCCTGGCGCCAGCTTTTCCAGTGGCTCAACCACGGGCCCAGCCCTAGTAACGACTTTGCGAACCGCGAGTTCGCC
TTCACCCTTCAGAACGACGCCTACCTGCGCTACCAGTCCTTTGCCACGGCCGACCTCCTACGCAAGGACGTGCTC
CGGCTGATGCCGTCGCGCTTCGAGATCGGCCCCGTCTACAGCACGAACCCGCGCGACCGCAAGACGCTGCGCAAC
TCGTCCGCATTCCGGCCGCTGGCCAAGGAGCTCTGCTTCGACATCGACCTGACGGACTACGACGACGTGCGCACC
TGCTGCGACAAGGCCAACATCTGCGCCAAGTGCTGGCGCTTCGTGACCATGGCCATCAAGGTCGTCGACGCCGCC
CTGCGCCACGACTTCGGCTTCGCCCACATCCTCTGGGTCTACTCCGGCCGCCGCGGCGCCCACGCCTGGGTCTGC
GACCGCAAGGCCCGCGCGCTCGACGACCCTAAGAGGAAGGCGATCGCCGGTTACCTCGAAGTTGTCAGGGGCGGC
GCGCAGAGCGGCAAGAAGGTCAATGTCCGGCGGCCGCTGCATCCTCATCTCTCCCGCAGCCTCGACATCCTCAAG
GCCCACTTCCAGGAGGATGTGCTCGTCACGCAGGATCCCTGGGCCTCGAACGAGCAGGCCGAGCGGCTGCTGCAG
CTGCTGCCGGACCGGACGCTTAACGAGTCGCTGCGGCGCAAGTGGGCGGCCACCCCCGGGCGCGACTCGGCCGCC
AAGTGGGCCGACATTGACGCCGCGGCCAAGGCCGGCGCCAGCAAGCAGCTGGTGCCGCGGGCGCTGCTCGAGGCC
AAGCAGGACGTCGTGCTCGAGTACACGTACCCGCGCCTCGACATCGAGGTCAGCAAGAAGCTCAACCATCTGCTC
AAGAGCCCGTTCGTCGTCCACCCGGGCACCGGCCGCGTCTGCGTGCCCATCGACGCCGCCCGCCCGGACGACTTC
GACCCGCTGGCCGTGCCGACCGTCCAGGGCCTGCTGGCCGAGATCGACGCCTGGCAGGCCGACGCCGCCGGCGAC
GAGGCCGACGCCGACGCCAAGAAGGGGGGACCGGCGGACTGGGAGAAGACGAGCCTGCGGCCGTACGTCGACTAC
TTCCGCGCCTTCGTCGCCGCGCTCATGCGCGACGAGCGGGAGGTGCGGGTCAAGAGGGAGCGGGACGAGGACTCG
ATGGAGTTTTGA
Transcript >Hirsu2|3552
ATGCCGCACCCGGTAGCCGCGGAGCCGGGGCGGCGCCCGCCCGACGCGGTCGACGAGGCGGCGATGGACGAGGAC
GGTCGCGCGCCGGGAGAGGACGGTCGCGCACTGCCTGGCGAGGCCGGGAGGCAGGTCGCGCTGGACGATCTGTTC
GCCGACGTCGACTCGGACGATGACTTTCTTGACGACGCGCCCGCGGAGGAGGCGGCGGTGAAGGAGGAGGAGGAG
GATGGCTCGGAGGCGGGGCCGGCGCTCCGGGCGTCGGACCCGGAGGTCATGCGCAGCTTCTACCAGCGGCTCTTC
CCCTGGCGCCAGCTTTTCCAGTGGCTCAACCACGGGCCCAGCCCTAGTAACGACTTTGCGAACCGCGAGTTCGCC
TTCACCCTTCAGAACGACGCCTACCTGCGCTACCAGTCCTTTGCCACGGCCGACCTCCTACGCAAGGACGTGCTC
CGGCTGATGCCGTCGCGCTTCGAGATCGGCCCCGTCTACAGCACGAACCCGCGCGACCGCAAGACGCTGCGCAAC
TCGTCCGCATTCCGGCCGCTGGCCAAGGAGCTCTGCTTCGACATCGACCTGACGGACTACGACGACGTGCGCACC
TGCTGCGACAAGGCCAACATCTGCGCCAAGTGCTGGCGCTTCGTGACCATGGCCATCAAGGTCGTCGACGCCGCC
CTGCGCCACGACTTCGGCTTCGCCCACATCCTCTGGGTCTACTCCGGCCGCCGCGGCGCCCACGCCTGGGTCTGC
GACCGCAAGGCCCGCGCGCTCGACGACCCTAAGAGGAAGGCGATCGCCGGTTACCTCGAAGTTGTCAGGGGCGGC
GCGCAGAGCGGCAAGAAGGTCAATGTCCGGCGGCCGCTGCATCCTCATCTCTCCCGCAGCCTCGACATCCTCAAG
GCCCACTTCCAGGAGGATGTGCTCGTCACGCAGGATCCCTGGGCCTCGAACGAGCAGGCCGAGCGGCTGCTGCAG
CTGCTGCCGGACCGGACGCTTAACGAGTCGCTGCGGCGCAAGTGGGCGGCCACCCCCGGGCGCGACTCGGCCGCC
AAGTGGGCCGACATTGACGCCGCGGCCAAGGCCGGCGCCAGCAAGCAGCTGGTGCCGCGGGCGCTGCTCGAGGCC
AAGCAGGACGTCGTGCTCGAGTACACGTACCCGCGCCTCGACATCGAGGTCAGCAAGAAGCTCAACCATCTGCTC
AAGAGCCCGTTCGTCGTCCACCCGGGCACCGGCCGCGTCTGCGTGCCCATCGACGCCGCCCGCCCGGACGACTTC
GACCCGCTGGCCGTGCCGACCGTCCAGGGCCTGCTGGCCGAGATCGACGCCTGGCAGGCCGACGCCGCCGGCGAC
GAGGCCGACGCCGACGCCAAGAAGGGGGGACCGGCGGACTGGGAGAAGACGAGCCTGCGGCCGTACGTCGACTAC
TTCCGCGCCTTCGTCGCCGCGCTCATGCGCGACGAGCGGGAGGTGCGGGTCAAGAGGGAGCGGGACGAGGACTCG
ATGGAGTTTTGA
Gene >Hirsu2|3552
ATGCCGCACCCGGTAGCCGCGGAGCCGGGGCGGCGCCCGCCCGACGCGGTCGACGAGGCGGCGATGGACGAGGAC
GGTCGCGCGCCGGGAGAGGACGGTCGCGCACTGCCTGGCGAGGCCGGGAGGCAGGTCGCGCTGGACGATCTGTTC
GCCGACGTCGACTCGGACGATGACTTTCTTGACGACGCGCCCGCGGAGGAGGCGGCGGTGAAGGAGGAGGAGGAG
GATGGCTCGGAGGCGGGGCCGGCGCTCCGGGCGTCGGACCCGGAGGTCATGCGCAGCTTCTACCAGCGGCTCTTC
CCCTGGCGCCAGCTTTTCCAGTGGCTCAACCACGGGCCCAGCCCTAGTAACGACTTTGCGAACCGCGAGTTCGCC
TTCACCCTTCAGAACGACGCCTACCTGCGCTACCAGTCCTTTGCCACGGCCGACCTGTGCGTCGGCCCTCCCCTC
TCTCTTACAAACACACACTCCCTTCCCCCCTTGACGAGTCGACGGTCCGCTGACGAAGTTTTTGCCTCCTGGGCA
GCCTACGCAAGGACGTGCTCCGGCTGATGCCGTCGCGCTTCGAGATCGGCCCCGTCTACAGCACGAACCCGCGCG
ACCGCAAGACGCTGCGCAACTCGTCCGCATTCCGGCCGCTGGCCAAGGAGCTCTGCTTCGACATCGACCTGACGG
ACTACGACGACGTGCGCACCTGCTGCGACAAGGCCAACATCTGCGCCAAGTGCTGGCGCTTCGTGACCATGGCCA
TCAAGGTCGTCGACGCCGCCCTGCGCCACGACTTCGGCTTCGCCCACATCCTCTGGGTCTACTCCGGCCGCCGCG
GCGCCCACGCCTGGGTCTGCGACCGCAAGGCCCGCGCGCTCGACGACCCTAAGAGGAAGGCGATCGCCGGTTACC
TCGAAGTTGTCAGGGGCGGCGCGCAGAGCGGCAAGAAGGTCAATGTCCGGCGGCCGCTGCATCCTCATCTCTCGT
ACGTTCCTCTCTCTCCCTCCGCCCCCTTAGCACATCTACGGAAAAACACGGCCGATGAGAGAGCGACGATGATGA
TGGGGGGACGACGGGCGGCTCAGAAAGGCTGACTCGCGCGACACCTGCAGCCGCAGCCTCGACATCCTCAAGGCC
CACTTCCAGGAGGATGTGCTCGTCACGCAGGATCCCTGGGCCTCGAACGAGCAGGCCGAGCGGCTGCTGCAGCTG
CTGCCGGACCGGACGCTTAACGAGTCGCTGCGGCGCAAGTGGGCGGCCACCCCCGGGCGCGACTCGGCCGCCAAG
TGGGCCGACATTGACGCCGCGGCCAAGGCCGGCGCCAGCAAGCAGCTGGTGCCGCGGGCGCTGCTCGAGGCCAAG
CAGGACGTCGTGCTCGAGTACACGTACCCGCGCCTCGACATCGAGGTCAGCAAGAAGCTCAACCATCTGCTCAAG
AGCCCGTTCGTCGTCCACCCGGGCACCGGCCGCGTCTGCGTGCCCATCGACGCCGCCCGCCCGGACGACTTCGAC
CCGCTGGCCGTGCCGACCGTCCAGGGCCTGCTGGCCGAGATCGACGCCTGGCAGGCCGACGCCGCCGGCGACGAG
GCCGACGCCGACGCCAAGAAGGGGGGACCGGCGGACTGGGAGAAGACGAGCCTGCGGCCGTACGTCGACTACTTC
CGCGCCTTCGTCGCCGCGCTCATGCGCGACGAGCGGGAGGTGCGGGTCAAGAGGGAGCGGGACGAGGACTCGATG
GAGTTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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