Protein ID | Hirsu2|3551 |
Gene name | |
Location | Contig_1937:1793..4028 |
Strand | + |
Gene length (bp) | 2235 |
Transcript length (bp) | 2235 |
Coding sequence length (bp) | 2235 |
Protein length (aa) | 745 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm|Nucleus | Nuclear localization signal | 0.4806 | 0.8444 | 0.3426 | 0.1318 | 0.0625 | 0.0231 | 0.0866 | 0.034 | 0.0346 | 0.0053 |
Orthofinder run ID | 4 |
Orthogroup | 117 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3551 MGGLTAPNDKWCPTLLKPWSDFIDRQRQVFGLLYDAFPAASTHQVFQDRHALAGIGPYLHSHPIADEKGLETFMH ITVENPVWTIVQHLTQLQAVSANHAFRLGAGIVFENHPHALGLASDEVAARRPPSTPRRGQLRPDQICICREGDG ASARRSILYIEEYKAPHKLTAQQLRAALGIRTEPLNIYRDVVNRATIPTNKFPVEKFQYHAERLTASAITQTYHY MILSGLEYGLLTTGEILVFLRIDWADPGTLLYHLAEPFAEVSSNSTHPHLCTAVGQLLAFSLMSLDASPHDQNER NEVAASLETWSQDFDAILQSMTDEDKTPSEGSPGSEPITREGLDRSPLYPRKSKSKTSPGRQEWVYRKSPASSSS SNGSPPDTPCPPDQSARRTRRTLAQRSRGSGGQESREQTSNGQTSHGQTTNGQTSNDPADHNPTGHNSTSQNQLE KSDEQRGHEKEYCTQKCLLGLVRGGLLDPSCPNVARHAHEDNLNVGGKKLARERHTLDHARFLDLLREQLKKTLD DGISKLYLEGARGVLFKVTLLSHGYTFVAKGTVEAFIDDLQHEAAVYERLKLSQGIHVPVHLGAIDLRSVNRTYY YWFTVDIIHLMFLSWGGESIRPADLEDSRAKEREDKAVQSLRAIHGAGIVHEDLRSANLLINGKTDDVMIIDFER ALILEPPRAPLAPLLRSDRNRRSRRASNAGNMNAARKAMGTVMKREAMTQRFSSEIALMGMIFSGKYDY* |
Coding | >Hirsu2|3551 ATGGGCGGTCTTACCGCTCCGAACGACAAATGGTGCCCAACCTTGCTCAAGCCTTGGTCCGACTTCATCGACCGA CAGCGCCAAGTTTTTGGATTGCTCTACGACGCCTTTCCGGCAGCAAGCACACACCAGGTCTTTCAGGACAGACAC GCCCTCGCTGGCATAGGCCCCTATCTCCATTCGCACCCCATCGCCGATGAGAAAGGACTCGAGACCTTTATGCAC ATCACCGTCGAAAATCCCGTCTGGACCATCGTCCAGCATCTGACGCAGCTTCAAGCTGTTAGCGCCAACCATGCC TTCCGACTTGGCGCCGGCATCGTCTTCGAGAATCATCCGCACGCCTTGGGCCTGGCGTCCGACGAGGTTGCTGCG AGACGGCCGCCATCGACACCGAGACGCGGTCAGCTACGTCCCGACCAAATTTGTATCTGCCGCGAAGGCGACGGC GCCTCGGCAAGACGCTCAATCCTCTACATTGAAGAGTACAAGGCCCCCCACAAACTAACGGCCCAGCAACTTCGC GCCGCCCTCGGGATCAGGACCGAGCCCCTGAACATCTACAGGGACGTCGTCAACCGCGCGACCATCCCCACCAAC AAGTTCCCGGTCGAGAAGTTCCAATACCACGCAGAGAGGCTTACCGCGTCCGCCATCACGCAGACGTACCACTAT ATGATCTTGAGTGGGCTTGAGTACGGCCTCCTGACGACGGGCGAGATCTTGGTCTTTCTCAGGATTGACTGGGCC GACCCGGGCACGTTGCTCTACCACCTGGCAGAACCGTTTGCCGAGGTCAGCTCCAATTCGACCCATCCCCATCTG TGTACGGCAGTCGGCCAGCTCCTAGCTTTCAGCCTCATGTCCCTCGACGCCTCGCCACATGACCAGAATGAGCGC AACGAGGTCGCTGCCAGCCTCGAAACATGGTCGCAGGATTTCGATGCGATACTGCAGTCGATGACCGATGAAGAC AAAACCCCATCAGAGGGTTCACCTGGCAGCGAGCCGATTACTCGCGAGGGCCTCGACCGATCGCCGCTTTACCCC AGGAAATCGAAATCGAAGACGAGCCCGGGAAGGCAAGAATGGGTGTATAGAAAGTCCCCGGCATCATCCAGCTCA TCGAATGGAAGCCCGCCCGATACGCCCTGCCCGCCGGACCAGTCGGCCCGTCGTACTCGACGGACCCTGGCGCAA CGTTCGCGAGGCAGTGGCGGGCAAGAAAGCCGTGAGCAAACGAGCAACGGCCAGACGAGCCATGGTCAGACGACC AACGGCCAGACGAGCAATGATCCGGCCGACCACAATCCAACCGGTCATAACTCAACAAGCCAGAATCAACTTGAA AAGAGCGACGAGCAGAGAGGCCACGAAAAAGAGTATTGCACCCAAAAGTGTCTCCTGGGACTTGTCAGGGGCGGT CTCCTTGACCCATCGTGCCCCAACGTTGCTCGCCATGCACACGAGGACAACTTGAACGTTGGTGGGAAGAAGCTT GCCCGCGAGCGCCACACTCTCGACCACGCTCGGTTCCTGGATCTCCTCCGGGAACAGTTGAAAAAGACATTGGAC GACGGTATCTCGAAGCTCTATCTGGAAGGCGCGCGCGGCGTCCTTTTCAAGGTGACGCTGCTTTCCCACGGCTAC ACCTTTGTCGCAAAGGGCACGGTCGAAGCCTTCATTGATGACCTCCAGCACGAGGCCGCCGTCTACGAGCGTCTG AAGCTGTCGCAGGGCATACACGTCCCTGTCCATTTGGGGGCCATTGACCTGCGATCGGTGAACAGGACCTACTAT TACTGGTTCACCGTCGACATCATCCACTTGATGTTTCTGTCTTGGGGAGGAGAGAGCATCCGTCCCGCGGACCTG GAAGATTCGAGGGCGAAGGAGCGCGAGGACAAGGCTGTGCAGTCGCTGCGCGCCATCCACGGCGCCGGCATCGTC CACGAGGACTTGCGGTCGGCGAACCTGCTGATCAATGGCAAGACGGACGATGTCATGATCATCGACTTCGAACGG GCCTTGATTCTAGAGCCGCCTCGAGCCCCCTTGGCTCCGTTACTGAGGAGCGACCGGAATCGGCGGTCCAGGCGG GCCAGCAATGCCGGCAACATGAACGCGGCACGGAAGGCGATGGGCACCGTGATGAAACGAGAAGCCATGACCCAA CGGTTCTCCAGCGAAATCGCCTTAATGGGCATGATCTTCTCGGGGAAGTATGATTATTGA |
Transcript | >Hirsu2|3551 ATGGGCGGTCTTACCGCTCCGAACGACAAATGGTGCCCAACCTTGCTCAAGCCTTGGTCCGACTTCATCGACCGA CAGCGCCAAGTTTTTGGATTGCTCTACGACGCCTTTCCGGCAGCAAGCACACACCAGGTCTTTCAGGACAGACAC GCCCTCGCTGGCATAGGCCCCTATCTCCATTCGCACCCCATCGCCGATGAGAAAGGACTCGAGACCTTTATGCAC ATCACCGTCGAAAATCCCGTCTGGACCATCGTCCAGCATCTGACGCAGCTTCAAGCTGTTAGCGCCAACCATGCC TTCCGACTTGGCGCCGGCATCGTCTTCGAGAATCATCCGCACGCCTTGGGCCTGGCGTCCGACGAGGTTGCTGCG AGACGGCCGCCATCGACACCGAGACGCGGTCAGCTACGTCCCGACCAAATTTGTATCTGCCGCGAAGGCGACGGC GCCTCGGCAAGACGCTCAATCCTCTACATTGAAGAGTACAAGGCCCCCCACAAACTAACGGCCCAGCAACTTCGC GCCGCCCTCGGGATCAGGACCGAGCCCCTGAACATCTACAGGGACGTCGTCAACCGCGCGACCATCCCCACCAAC AAGTTCCCGGTCGAGAAGTTCCAATACCACGCAGAGAGGCTTACCGCGTCCGCCATCACGCAGACGTACCACTAT ATGATCTTGAGTGGGCTTGAGTACGGCCTCCTGACGACGGGCGAGATCTTGGTCTTTCTCAGGATTGACTGGGCC GACCCGGGCACGTTGCTCTACCACCTGGCAGAACCGTTTGCCGAGGTCAGCTCCAATTCGACCCATCCCCATCTG TGTACGGCAGTCGGCCAGCTCCTAGCTTTCAGCCTCATGTCCCTCGACGCCTCGCCACATGACCAGAATGAGCGC AACGAGGTCGCTGCCAGCCTCGAAACATGGTCGCAGGATTTCGATGCGATACTGCAGTCGATGACCGATGAAGAC AAAACCCCATCAGAGGGTTCACCTGGCAGCGAGCCGATTACTCGCGAGGGCCTCGACCGATCGCCGCTTTACCCC AGGAAATCGAAATCGAAGACGAGCCCGGGAAGGCAAGAATGGGTGTATAGAAAGTCCCCGGCATCATCCAGCTCA TCGAATGGAAGCCCGCCCGATACGCCCTGCCCGCCGGACCAGTCGGCCCGTCGTACTCGACGGACCCTGGCGCAA CGTTCGCGAGGCAGTGGCGGGCAAGAAAGCCGTGAGCAAACGAGCAACGGCCAGACGAGCCATGGTCAGACGACC AACGGCCAGACGAGCAATGATCCGGCCGACCACAATCCAACCGGTCATAACTCAACAAGCCAGAATCAACTTGAA AAGAGCGACGAGCAGAGAGGCCACGAAAAAGAGTATTGCACCCAAAAGTGTCTCCTGGGACTTGTCAGGGGCGGT CTCCTTGACCCATCGTGCCCCAACGTTGCTCGCCATGCACACGAGGACAACTTGAACGTTGGTGGGAAGAAGCTT GCCCGCGAGCGCCACACTCTCGACCACGCTCGGTTCCTGGATCTCCTCCGGGAACAGTTGAAAAAGACATTGGAC GACGGTATCTCGAAGCTCTATCTGGAAGGCGCGCGCGGCGTCCTTTTCAAGGTGACGCTGCTTTCCCACGGCTAC ACCTTTGTCGCAAAGGGCACGGTCGAAGCCTTCATTGATGACCTCCAGCACGAGGCCGCCGTCTACGAGCGTCTG AAGCTGTCGCAGGGCATACACGTCCCTGTCCATTTGGGGGCCATTGACCTGCGATCGGTGAACAGGACCTACTAT TACTGGTTCACCGTCGACATCATCCACTTGATGTTTCTGTCTTGGGGAGGAGAGAGCATCCGTCCCGCGGACCTG GAAGATTCGAGGGCGAAGGAGCGCGAGGACAAGGCTGTGCAGTCGCTGCGCGCCATCCACGGCGCCGGCATCGTC CACGAGGACTTGCGGTCGGCGAACCTGCTGATCAATGGCAAGACGGACGATGTCATGATCATCGACTTCGAACGG GCCTTGATTCTAGAGCCGCCTCGAGCCCCCTTGGCTCCGTTACTGAGGAGCGACCGGAATCGGCGGTCCAGGCGG GCCAGCAATGCCGGCAACATGAACGCGGCACGGAAGGCGATGGGCACCGTGATGAAACGAGAAGCCATGACCCAA CGGTTCTCCAGCGAAATCGCCTTAATGGGCATGATCTTCTCGGGGAAGTATGATTATTGA |
Gene | >Hirsu2|3551 ATGGGCGGTCTTACCGCTCCGAACGACAAATGGTGCCCAACCTTGCTCAAGCCTTGGTCCGACTTCATCGACCGA CAGCGCCAAGTTTTTGGATTGCTCTACGACGCCTTTCCGGCAGCAAGCACACACCAGGTCTTTCAGGACAGACAC GCCCTCGCTGGCATAGGCCCCTATCTCCATTCGCACCCCATCGCCGATGAGAAAGGACTCGAGACCTTTATGCAC ATCACCGTCGAAAATCCCGTCTGGACCATCGTCCAGCATCTGACGCAGCTTCAAGCTGTTAGCGCCAACCATGCC TTCCGACTTGGCGCCGGCATCGTCTTCGAGAATCATCCGCACGCCTTGGGCCTGGCGTCCGACGAGGTTGCTGCG AGACGGCCGCCATCGACACCGAGACGCGGTCAGCTACGTCCCGACCAAATTTGTATCTGCCGCGAAGGCGACGGC GCCTCGGCAAGACGCTCAATCCTCTACATTGAAGAGTACAAGGCCCCCCACAAACTAACGGCCCAGCAACTTCGC GCCGCCCTCGGGATCAGGACCGAGCCCCTGAACATCTACAGGGACGTCGTCAACCGCGCGACCATCCCCACCAAC AAGTTCCCGGTCGAGAAGTTCCAATACCACGCAGAGAGGCTTACCGCGTCCGCCATCACGCAGACGTACCACTAT ATGATCTTGAGTGGGCTTGAGTACGGCCTCCTGACGACGGGCGAGATCTTGGTCTTTCTCAGGATTGACTGGGCC GACCCGGGCACGTTGCTCTACCACCTGGCAGAACCGTTTGCCGAGGTCAGCTCCAATTCGACCCATCCCCATCTG TGTACGGCAGTCGGCCAGCTCCTAGCTTTCAGCCTCATGTCCCTCGACGCCTCGCCACATGACCAGAATGAGCGC AACGAGGTCGCTGCCAGCCTCGAAACATGGTCGCAGGATTTCGATGCGATACTGCAGTCGATGACCGATGAAGAC AAAACCCCATCAGAGGGTTCACCTGGCAGCGAGCCGATTACTCGCGAGGGCCTCGACCGATCGCCGCTTTACCCC AGGAAATCGAAATCGAAGACGAGCCCGGGAAGGCAAGAATGGGTGTATAGAAAGTCCCCGGCATCATCCAGCTCA TCGAATGGAAGCCCGCCCGATACGCCCTGCCCGCCGGACCAGTCGGCCCGTCGTACTCGACGGACCCTGGCGCAA CGTTCGCGAGGCAGTGGCGGGCAAGAAAGCCGTGAGCAAACGAGCAACGGCCAGACGAGCCATGGTCAGACGACC AACGGCCAGACGAGCAATGATCCGGCCGACCACAATCCAACCGGTCATAACTCAACAAGCCAGAATCAACTTGAA AAGAGCGACGAGCAGAGAGGCCACGAAAAAGAGTATTGCACCCAAAAGTGTCTCCTGGGACTTGTCAGGGGCGGT CTCCTTGACCCATCGTGCCCCAACGTTGCTCGCCATGCACACGAGGACAACTTGAACGTTGGTGGGAAGAAGCTT GCCCGCGAGCGCCACACTCTCGACCACGCTCGGTTCCTGGATCTCCTCCGGGAACAGTTGAAAAAGACATTGGAC GACGGTATCTCGAAGCTCTATCTGGAAGGCGCGCGCGGCGTCCTTTTCAAGGTGACGCTGCTTTCCCACGGCTAC ACCTTTGTCGCAAAGGGCACGGTCGAAGCCTTCATTGATGACCTCCAGCACGAGGCCGCCGTCTACGAGCGTCTG AAGCTGTCGCAGGGCATACACGTCCCTGTCCATTTGGGGGCCATTGACCTGCGATCGGTGAACAGGACCTACTAT TACTGGTTCACCGTCGACATCATCCACTTGATGTTTCTGTCTTGGGGAGGAGAGAGCATCCGTCCCGCGGACCTG GAAGATTCGAGGGCGAAGGAGCGCGAGGACAAGGCTGTGCAGTCGCTGCGCGCCATCCACGGCGCCGGCATCGTC CACGAGGACTTGCGGTCGGCGAACCTGCTGATCAATGGCAAGACGGACGATGTCATGATCATCGACTTCGAACGG GCCTTGATTCTAGAGCCGCCTCGAGCCCCCTTGGCTCCGTTACTGAGGAGCGACCGGAATCGGCGGTCCAGGCGG GCCAGCAATGCCGGCAACATGAACGCGGCACGGAAGGCGATGGGCACCGTGATGAAACGAGAAGCCATGACCCAA CGGTTCTCCAGCGAAATCGCCTTAATGGGCATGATCTTCTCGGGGAAGTATGATTATTGA |