Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3546
Gene name
LocationContig_1933:3903..4262
Strand+
Gene length (bp)359
Transcript length (bp)231
Coding sequence length (bp)231
Protein length (aa) 77

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00787 PX PX domain 3.6E-05 36 73

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0035091 phosphatidylinositol binding Yes
GO:0005543 phospholipid binding No
GO:0005488 binding No
GO:0008289 lipid binding No
GO:0003674 molecular_function No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Lysosome/Vacuole Signal peptide|Transmembrane domain 0.3085 0.1988 0.1181 0.2787 0.3109 0.0034 0.4829 0.8334 0.4206 0.0192

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup654
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|430
Ophiocordyceps australis map64 (Brazil) OphauB2|223
Ophiocordyceps camponoti-floridani Ophcf2|07084
Ophiocordyceps camponoti-rufipedis Ophun1|1891
Ophiocordyceps kimflemingae Ophio5|3571
Ophiocordyceps subramaniannii Hirsu2|10625
Ophiocordyceps subramaniannii Hirsu2|3546 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3546
MAPPPEIAIPSTSVSDEGGSKPFTLYNITLRLPLRSYVVQKRYSEFALLHSTLVEQVGAPPPEPLPGKHWLKSTL
L*
Coding >Hirsu2|3546
ATGGCTCCGCCACCCGAGATCGCGATACCGTCGACCAGCGTCTCCGACGAGGGCGGCTCCAAGCCCTTCACGCTC
TACAACATCACGCTCCGCCTGCCGCTGCGGTCCTACGTCGTGCAGAAGCGCTACTCCGAGTTCGCCCTGCTGCAC
AGCACGCTGGTCGAGCAGGTCGGCGCCCCGCCGCCCGAGCCGCTGCCGGGCAAGCACTGGCTCAAGTCGACGCTC
CTCTAG
Transcript >Hirsu2|3546
ATGGCTCCGCCACCCGAGATCGCGATACCGTCGACCAGCGTCTCCGACGAGGGCGGCTCCAAGCCCTTCACGCTC
TACAACATCACGCTCCGCCTGCCGCTGCGGTCCTACGTCGTGCAGAAGCGCTACTCCGAGTTCGCCCTGCTGCAC
AGCACGCTGGTCGAGCAGGTCGGCGCCCCGCCGCCCGAGCCGCTGCCGGGCAAGCACTGGCTCAAGTCGACGCTC
CTCTAG
Gene >Hirsu2|3546
ATGGCTCCGCCACCCGAGATCGCGATACCGTCGACCAGCGTCTCCGACGAGGGCGGCTCCAAGCCCTTCACGCTC
TACAACATCACGCTCCGCCTGCCGCTGCGGTCCTACGTCGTGCAGAAGCGCTACTCCGAGTTCGCCCTGCTGCAC
AGCACGCTGGTCGAGCAGGTCGGCGCCCCGCCGCCCGAGCCGCTGCCGGGCAAGCACTGGCTCAAGTCGACGGTC
AAGTCGGCCGACCTGGCGCGGGAGCGGCAGGCCGGCCTGGAGAAGTACCTGCGCGCCATCGCCGAGTCGCCCGAC
CGCCGGTGGCGGGACACGTCGGCCTGGCGGGCCTTCCTGAACCTGCCCAGCTCCTCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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