Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|354
Gene name
LocationContig_1069:4385..5471
Strand+
Gene length (bp)1086
Transcript length (bp)912
Coding sequence length (bp)912
Protein length (aa) 304

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|D4AK17|PLCX1_ARTBC PI-PLC X domain-containing protein 1 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_04618 PE=1 SV=1 13 303 4.0E-88
sp|D4AUX6|A8043_ARTBC Uncharacterized secreted protein ARB_08043 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_08043 PE=1 SV=1 30 291 3.0E-60
sp|Q93XX5|Y5713_ARATH PI-PLC X domain-containing protein At5g67130 OS=Arabidopsis thaliana GN=At5g67130 PE=1 SV=1 21 303 1.0E-10
sp|Q8CHS4|PLCX1_MOUSE PI-PLC X domain-containing protein 1 OS=Mus musculus GN=Plcxd1 PE=2 SV=1 68 206 1.0E-06
sp|Q9NUJ7|PLCX1_HUMAN PI-PLC X domain-containing protein 1 OS=Homo sapiens GN=PLCXD1 PE=2 SV=1 69 206 2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 28 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|354
MGVMPRLGPLAALVLCAVALVCVGASAVAPRAAARCNGHEKLCGRRYSNVTMIGTHNSAFVGDTPFHNQFVTVTE
QLDMGVRFLQAQTHNKDDTIELCHTSCLELDVGPLTDYLQELADWMKGHADEVVTLLLTNIDAIPLDKFDAAVGS
VGLKKYLYHPRGVVPKDQWPTLQELIKAGTRLIIFMDYHTDQSQFDYLINEFDYFWETPYGITDKNFPTCNVDRP
SGGDANRLMGIMNHMLNFQIGRIVFPNMIDAATTNSVASIQRQVDLCKSQGKAQPNVVLLDWVNIGEARKAHEVL
NAL*
Coding >Hirsu2|354
ATGGGCGTGATGCCACGCCTCGGCCCGCTGGCCGCCCTCGTCCTGTGCGCCGTCGCGCTGGTCTGCGTCGGCGCC
TCGGCCGTCGCCCCGCGGGCGGCGGCGCGCTGCAACGGGCACGAGAAGCTGTGCGGGCGGCGCTACTCCAACGTC
ACCATGATCGGGACGCACAACAGCGCCTTCGTCGGCGACACGCCCTTCCACAACCAGTTCGTGACGGTGACGGAG
CAGCTGGACATGGGCGTGCGCTTCCTGCAGGCGCAGACGCACAACAAGGACGACACCATCGAGCTGTGCCACACG
TCGTGCCTCGAGCTCGACGTCGGGCCGCTGACCGACTACCTCCAGGAGCTGGCCGACTGGATGAAGGGCCACGCC
GACGAGGTCGTGACCCTGCTGCTGACCAACATCGACGCCATCCCGCTCGACAAGTTCGACGCCGCCGTCGGCAGC
GTCGGCCTCAAGAAGTACCTCTACCACCCGCGCGGCGTCGTGCCCAAGGACCAGTGGCCGACGCTGCAGGAGCTC
ATCAAGGCCGGCACCCGTCTGATTATCTTTATGGACTACCACACGGACCAGTCGCAGTTCGACTACCTGATCAAC
GAGTTCGACTACTTCTGGGAGACGCCGTACGGCATCACGGACAAGAACTTCCCGACCTGCAACGTCGACCGGCCG
TCGGGCGGCGACGCCAACCGGCTGATGGGCATCATGAACCACATGCTCAACTTCCAGATCGGCAGGATCGTCTTC
CCCAACATGATTGACGCGGCCACGACCAACTCGGTCGCCTCGATCCAGCGGCAGGTAGACCTCTGCAAGAGCCAG
GGCAAGGCGCAGCCGAACGTCGTCTTGCTCGACTGGGTCAACATCGGCGAGGCGCGAAAGGCCCACGAGGTTCTC
AACGCGCTGTAG
Transcript >Hirsu2|354
ATGGGCGTGATGCCACGCCTCGGCCCGCTGGCCGCCCTCGTCCTGTGCGCCGTCGCGCTGGTCTGCGTCGGCGCC
TCGGCCGTCGCCCCGCGGGCGGCGGCGCGCTGCAACGGGCACGAGAAGCTGTGCGGGCGGCGCTACTCCAACGTC
ACCATGATCGGGACGCACAACAGCGCCTTCGTCGGCGACACGCCCTTCCACAACCAGTTCGTGACGGTGACGGAG
CAGCTGGACATGGGCGTGCGCTTCCTGCAGGCGCAGACGCACAACAAGGACGACACCATCGAGCTGTGCCACACG
TCGTGCCTCGAGCTCGACGTCGGGCCGCTGACCGACTACCTCCAGGAGCTGGCCGACTGGATGAAGGGCCACGCC
GACGAGGTCGTGACCCTGCTGCTGACCAACATCGACGCCATCCCGCTCGACAAGTTCGACGCCGCCGTCGGCAGC
GTCGGCCTCAAGAAGTACCTCTACCACCCGCGCGGCGTCGTGCCCAAGGACCAGTGGCCGACGCTGCAGGAGCTC
ATCAAGGCCGGCACCCGTCTGATTATCTTTATGGACTACCACACGGACCAGTCGCAGTTCGACTACCTGATCAAC
GAGTTCGACTACTTCTGGGAGACGCCGTACGGCATCACGGACAAGAACTTCCCGACCTGCAACGTCGACCGGCCG
TCGGGCGGCGACGCCAACCGGCTGATGGGCATCATGAACCACATGCTCAACTTCCAGATCGGCAGGATCGTCTTC
CCCAACATGATTGACGCGGCCACGACCAACTCGGTCGCCTCGATCCAGCGGCAGGTAGACCTCTGCAAGAGCCAG
GGCAAGGCGCAGCCGAACGTCGTCTTGCTCGACTGGGTCAACATCGGCGAGGCGCGAAAGGCCCACGAGGTTCTC
AACGCGCTGTAG
Gene >Hirsu2|354
ATGGGCGTGATGCCACGCCTCGGCCCGCTGGCCGCCCTCGTCCTGTGCGCCGTCGCGCTGGTCTGCGTCGGCGCC
TCGGCCGTCGCCCCGCGGGCGGCGGCGCGCTGCAACGGGCACGAGAAGCTGTGCGGGCGGCGCTACTCCAACGTC
ACCATGATCGGGACGCACAACAGCGCCTTCGTCGGCGACACGCCCTTCCACAACCAGTTCGTGACGGTGACGGAG
CAGCTGGACATGGGCGTGCGCTTCCTGCAGGCGCAGACGCACAACAAGGACGACACCATCGAGCTGTGCCACACG
TCGTGCCTCGAGCTCGACGTCGGGCCGCTGACCGACTACCTCCAGGAGCTGGCCGACTGGATGAAGGGCCACGCC
GACGAGGTCGTGACCCTGCTGCTGACCAACATCGACGCCATCCCGCTCGACAAGTTCGACGCCGCCGTCGGCAGC
GTCGGCCTCAAGAAGTACCTCTACCACCCGCGCGGCGTCGTGCCCAAGGACCAGTGGCCGACGCTGCAGGAGCTC
ATCAAGGCCGGCACCCGTCTGATTATCTTTATGGGTGAGTCGCGCCCTCCGTCATCTGGCCAGGCTCTCTCGCTC
GCCCCGGACGGAAAGGCTGACGGCGCCGGCAGACTACCACACGGACCAGTCGCAGTTCGACTACCTGATCAACGA
GTTCGACTACTTCTGGGAGACGCCGTACGGCATCACGGACAAGAACTTCCCGACCTGCAACGTCGACCGGCCGTC
GGGCGGCGACGCCAACCGGCTGATGGGCATCATGAACCACATGCTCAACTTCCAGATCGGCAGGATCGTCTTCCC
CAACATGATTGACGCGGCCACGACCAACTCGGTCGCCTCGATCCAGCGGCAGGTAGACCTCTGCAAGAGCCAGGG
CAAGGCGCAGCCGAACGTCGTCTTGGTGAGTGGAGGAAACCGGTCACGAGGGCCGAGGCGCGAGAGGGCGTGGAG
AGGGAGGGAGAGAGAGAGAGAAAGAGAGAGGCTAACTTCGTCTTTGCGCAGCTCGACTGGGTCAACATCGGCGAG
GCGCGAAAGGCCCACGAGGTTCTCAACGCGCTGTAG

© 2020 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail