Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3533
Gene name
LocationContig_193:7269..8238
Strand-
Gene length (bp)969
Transcript length (bp)969
Coding sequence length (bp)969
Protein length (aa) 323

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01730 UreF UreF 4.8E-15 73 276

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O14016|UREF_SCHPO Uncharacterized urease accessory protein UreF-like OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29A4.13 PE=3 SV=1 33 129 2.0E-14
sp|O14016|UREF_SCHPO Uncharacterized urease accessory protein UreF-like OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29A4.13 PE=3 SV=1 223 322 1.0E-13
sp|Q9XHZ3|UREF_ARATH Urease accessory protein F OS=Arabidopsis thaliana GN=UREF PE=2 SV=1 171 322 7.0E-09
sp|Q0E3L5|UREF_ORYSJ Urease accessory protein F OS=Oryza sativa subsp. japonica GN=UREF PE=2 SV=2 221 320 7.0E-09
sp|E0ZS46|UREF_ORYSI Urease accessory protein F OS=Oryza sativa subsp. indica GN=UREF PE=2 SV=1 221 320 7.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O14016|UREF_SCHPO Uncharacterized urease accessory protein UreF-like OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29A4.13 PE=3 SV=1 33 129 2.0E-14
sp|O14016|UREF_SCHPO Uncharacterized urease accessory protein UreF-like OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC29A4.13 PE=3 SV=1 223 322 1.0E-13
sp|Q9XHZ3|UREF_ARATH Urease accessory protein F OS=Arabidopsis thaliana GN=UREF PE=2 SV=1 171 322 7.0E-09
sp|Q0E3L5|UREF_ORYSJ Urease accessory protein F OS=Oryza sativa subsp. japonica GN=UREF PE=2 SV=2 221 320 7.0E-09
sp|E0ZS46|UREF_ORYSI Urease accessory protein F OS=Oryza sativa subsp. indica GN=UREF PE=2 SV=1 221 320 7.0E-09
sp|Q0BQ38|UREF_GRABC Urease accessory protein UreF OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ureF PE=3 SV=1 229 322 1.0E-06
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GO

GO Term Description Terminal node
GO:0016151 nickel cation binding Yes
GO:0006807 nitrogen compound metabolic process Yes
GO:0008152 metabolic process No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0046914 transition metal ion binding No
GO:0003674 molecular_function No
GO:0008150 biological_process No
GO:0043169 cation binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.6766 0.3712 0.0793 0.026 0.218 0.0287 0.1458 0.1177 0.1448 0.0993

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5144
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1336
Ophiocordyceps australis map64 (Brazil) OphauB2|6011
Ophiocordyceps camponoti-rufipedis Ophun1|1125
Ophiocordyceps kimflemingae Ophio5|4129
Ophiocordyceps subramaniannii Hirsu2|3533 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3533
MEEAALQRQIAELSARLARLRGAAPPPAPPSPHFLLLLADSALPIGSFAFSSGLESCLAHAAAWPAFFPLSMAAL
ASAALPFVLAAHRRPCALVALDDEADAAAVCAVARRASVAQGRALLGVWERSFAPALRDSGAASCSSSAAASATS
SSSTTASATSSSSAAASATSSSSTTASAASSSSAASSASSPEAAASILAHFAALLRDSSSASAADDVPPPVAAHL
APLFGAVCAFAGLDLRQAAYVFMLSHAKALVSAAVRASVFGPYHGHRLLAGHQLRHMIDALVDREWDTPSDEAGQ
SVPIMDLWVGRHELLYSRIFNS*
Coding >Hirsu2|3533
ATGGAGGAAGCGGCGCTGCAGAGGCAGATAGCCGAGCTGTCGGCGCGGCTGGCGCGGCTGCGCGGCGCGGCCCCA
CCGCCGGCCCCGCCGTCGCCGCACTTCCTACTGCTGCTGGCCGACTCGGCCCTGCCGATCGGCTCCTTCGCCTTC
AGCAGCGGGCTGGAGTCGTGCCTGGCGCACGCGGCCGCCTGGCCGGCCTTCTTCCCGCTGTCGATGGCGGCCCTG
GCGTCGGCCGCGCTGCCGTTCGTGCTGGCTGCCCACCGCCGGCCCTGCGCGCTGGTGGCGCTCGACGACGAGGCT
GACGCGGCGGCTGTGTGTGCGGTTGCGCGCCGTGCCAGCGTCGCGCAGGGCCGCGCGCTGCTCGGCGTGTGGGAG
AGGTCGTTTGCGCCCGCTCTGCGGGACTCCGGCGCCGCGTCTTGCTCGTCTTCTGCCGCCGCCTCTGCTACGTCC
TCGTCTTCTACCACCGCCTCTGCTACGTCCTCGTCTTCTGCCGCCGCCTCTGCTACGTCCTCGTCTTCTACCACC
GCCTCTGCTGCGTCTTCTTCTTCTGCCGCCTCCTCCGCTTCCTCGCCCGAGGCCGCGGCGTCCATCCTCGCACAC
TTCGCCGCCCTGCTCCGGGACTCGTCGTCAGCATCGGCGGCCGACGACGTCCCGCCCCCCGTCGCGGCCCACCTG
GCGCCGCTGTTCGGCGCCGTCTGCGCCTTCGCCGGCCTCGACCTCCGCCAGGCCGCCTACGTCTTCATGCTCAGC
CACGCCAAGGCCCTGGTCTCGGCCGCCGTCCGGGCCAGCGTCTTCGGCCCCTACCACGGCCACCGGCTCCTGGCC
GGCCACCAGCTGCGGCACATGATCGACGCCCTCGTCGACCGCGAGTGGGACACGCCGAGCGACGAGGCCGGCCAG
AGCGTCCCCATTATGGACCTGTGGGTCGGGCGGCACGAGCTCCTGTACTCGAGGATCTTCAACAGCTGA
Transcript >Hirsu2|3533
ATGGAGGAAGCGGCGCTGCAGAGGCAGATAGCCGAGCTGTCGGCGCGGCTGGCGCGGCTGCGCGGCGCGGCCCCA
CCGCCGGCCCCGCCGTCGCCGCACTTCCTACTGCTGCTGGCCGACTCGGCCCTGCCGATCGGCTCCTTCGCCTTC
AGCAGCGGGCTGGAGTCGTGCCTGGCGCACGCGGCCGCCTGGCCGGCCTTCTTCCCGCTGTCGATGGCGGCCCTG
GCGTCGGCCGCGCTGCCGTTCGTGCTGGCTGCCCACCGCCGGCCCTGCGCGCTGGTGGCGCTCGACGACGAGGCT
GACGCGGCGGCTGTGTGTGCGGTTGCGCGCCGTGCCAGCGTCGCGCAGGGCCGCGCGCTGCTCGGCGTGTGGGAG
AGGTCGTTTGCGCCCGCTCTGCGGGACTCCGGCGCCGCGTCTTGCTCGTCTTCTGCCGCCGCCTCTGCTACGTCC
TCGTCTTCTACCACCGCCTCTGCTACGTCCTCGTCTTCTGCCGCCGCCTCTGCTACGTCCTCGTCTTCTACCACC
GCCTCTGCTGCGTCTTCTTCTTCTGCCGCCTCCTCCGCTTCCTCGCCCGAGGCCGCGGCGTCCATCCTCGCACAC
TTCGCCGCCCTGCTCCGGGACTCGTCGTCAGCATCGGCGGCCGACGACGTCCCGCCCCCCGTCGCGGCCCACCTG
GCGCCGCTGTTCGGCGCCGTCTGCGCCTTCGCCGGCCTCGACCTCCGCCAGGCCGCCTACGTCTTCATGCTCAGC
CACGCCAAGGCCCTGGTCTCGGCCGCCGTCCGGGCCAGCGTCTTCGGCCCCTACCACGGCCACCGGCTCCTGGCC
GGCCACCAGCTGCGGCACATGATCGACGCCCTCGTCGACCGCGAGTGGGACACGCCGAGCGACGAGGCCGGCCAG
AGCGTCCCCATTATGGACCTGTGGGTCGGGCGGCACGAGCTCCTGTACTCGAGGATCTTCAACAGCTGA
Gene >Hirsu2|3533
ATGGAGGAAGCGGCGCTGCAGAGGCAGATAGCCGAGCTGTCGGCGCGGCTGGCGCGGCTGCGCGGCGCGGCCCCA
CCGCCGGCCCCGCCGTCGCCGCACTTCCTACTGCTGCTGGCCGACTCGGCCCTGCCGATCGGCTCCTTCGCCTTC
AGCAGCGGGCTGGAGTCGTGCCTGGCGCACGCGGCCGCCTGGCCGGCCTTCTTCCCGCTGTCGATGGCGGCCCTG
GCGTCGGCCGCGCTGCCGTTCGTGCTGGCTGCCCACCGCCGGCCCTGCGCGCTGGTGGCGCTCGACGACGAGGCT
GACGCGGCGGCTGTGTGTGCGGTTGCGCGCCGTGCCAGCGTCGCGCAGGGCCGCGCGCTGCTCGGCGTGTGGGAG
AGGTCGTTTGCGCCCGCTCTGCGGGACTCCGGCGCCGCGTCTTGCTCGTCTTCTGCCGCCGCCTCTGCTACGTCC
TCGTCTTCTACCACCGCCTCTGCTACGTCCTCGTCTTCTGCCGCCGCCTCTGCTACGTCCTCGTCTTCTACCACC
GCCTCTGCTGCGTCTTCTTCTTCTGCCGCCTCCTCCGCTTCCTCGCCCGAGGCCGCGGCGTCCATCCTCGCACAC
TTCGCCGCCCTGCTCCGGGACTCGTCGTCAGCATCGGCGGCCGACGACGTCCCGCCCCCCGTCGCGGCCCACCTG
GCGCCGCTGTTCGGCGCCGTCTGCGCCTTCGCCGGCCTCGACCTCCGCCAGGCCGCCTACGTCTTCATGCTCAGC
CACGCCAAGGCCCTGGTCTCGGCCGCCGTCCGGGCCAGCGTCTTCGGCCCCTACCACGGCCACCGGCTCCTGGCC
GGCCACCAGCTGCGGCACATGATCGACGCCCTCGTCGACCGCGAGTGGGACACGCCGAGCGACGAGGCCGGCCAG
AGCGTCCCCATTATGGACCTGTGGGTCGGGCGGCACGAGCTCCTGTACTCGAGGATCTTCAACAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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