Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3530
Gene name
LocationContig_193:3041..3517
Strand+
Gene length (bp)476
Transcript length (bp)303
Coding sequence length (bp)303
Protein length (aa) 101

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05032 Spo12 Spo12 family 3.8E-15 47 79

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3530
MSSHVLGDKDVNAPVAEQQASADVKSMEYHRQVFQSKMAEEKSGKYVSPSDNIMSPCTAKIHALRNKHAAKVKPK
SLFAQASAKKLGGENALGARPVQQP*
Coding >Hirsu2|3530
ATGTCGAGCCACGTCCTCGGCGACAAAGACGTCAACGCCCCCGTGGCAGAGCAGCAGGCGTCCGCCGACGTCAAG
AGCATGGAGTATCACCGCCAGGTCTTTCAGTCCAAGATGGCCGAGGAAAAATCGGGCAAATATGTCTCGCCGTCC
GACAACATCATGAGCCCATGCACGGCCAAGATCCATGCCCTGCGCAATAAGCATGCTGCCAAGGTCAAGCCCAAG
TCTCTCTTCGCCCAGGCGAGCGCTAAGAAGCTCGGCGGAGAGAATGCTCTGGGAGCGCGGCCCGTCCAGCAGCCC
TGA
Transcript >Hirsu2|3530
ATGTCGAGCCACGTCCTCGGCGACAAAGACGTCAACGCCCCCGTGGCAGAGCAGCAGGCGTCCGCCGACGTCAAG
AGCATGGAGTATCACCGCCAGGTCTTTCAGTCCAAGATGGCCGAGGAAAAATCGGGCAAATATGTCTCGCCGTCC
GACAACATCATGAGCCCATGCACGGCCAAGATCCATGCCCTGCGCAATAAGCATGCTGCCAAGGTCAAGCCCAAG
TCTCTCTTCGCCCAGGCGAGCGCTAAGAAGCTCGGCGGAGAGAATGCTCTGGGAGCGCGGCCCGTCCAGCAGCCC
TGA
Gene >Hirsu2|3530
ATGTCGAGCCACGTCCTCGGCGACAAAGACGTCAACGCCCCCGTGGCAGAGCAGCAGGCGTCCGCCGACGTCAAG
AGCATGGAGTATCACCGCCAGGTCTTTCAGTCCAAGATGGCCGAGGAAAAGTAGCCGCTCCCTTCCCCTTGTCTT
CCGACACGAGACGGCAAAGTGACGGGCCCAGACTAACGATGCATGCGGAAAAGCAGATCGGGCAAATATGTCTCG
CCGTCCGACAACATCATGAGCCCATGCACGGCCAAGATCCATGCCCTGCGCAATAAGCATGCTGCCAAGTCGGTC
CTCCCCGTCCCCCGCTCGCGCTTCCTCCCGTCCCTCCGTCCACGTCTTCGACGAGCATCGCTGACAAGCCCCGTC
CGCTTCACAGGGTCAAGCCCAAGTCTCTCTTCGCCCAGGCGAGCGCTAAGAAGCTCGGCGGAGAGAATGCTCTGG
GAGCGCGGCCCGTCCAGCAGCCCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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