Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3530
Gene name
LocationContig_193:3041..3517
Strand+
Gene length (bp)476
Transcript length (bp)303
Coding sequence length (bp)303
Protein length (aa) 101

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05032 Spo12 Spo12 family 4.8E-15 47 79

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm Nuclear localization signal 0.6562 0.3908 0.0344 0.2089 0.2628 0.0142 0.0305 0.0801 0.1224 0.0286

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2455
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1339
Ophiocordyceps australis map64 (Brazil) OphauB2|6014
Ophiocordyceps camponoti-floridani Ophcf2|06804
Ophiocordyceps camponoti-rufipedis Ophun1|1122
Ophiocordyceps kimflemingae Ophio5|4126
Ophiocordyceps subramaniannii Hirsu2|3530 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3530
MSSHVLGDKDVNAPVAEQQASADVKSMEYHRQVFQSKMAEEKSGKYVSPSDNIMSPCTAKIHALRNKHAAKVKPK
SLFAQASAKKLGGENALGARPVQQP*
Coding >Hirsu2|3530
ATGTCGAGCCACGTCCTCGGCGACAAAGACGTCAACGCCCCCGTGGCAGAGCAGCAGGCGTCCGCCGACGTCAAG
AGCATGGAGTATCACCGCCAGGTCTTTCAGTCCAAGATGGCCGAGGAAAAATCGGGCAAATATGTCTCGCCGTCC
GACAACATCATGAGCCCATGCACGGCCAAGATCCATGCCCTGCGCAATAAGCATGCTGCCAAGGTCAAGCCCAAG
TCTCTCTTCGCCCAGGCGAGCGCTAAGAAGCTCGGCGGAGAGAATGCTCTGGGAGCGCGGCCCGTCCAGCAGCCC
TGA
Transcript >Hirsu2|3530
ATGTCGAGCCACGTCCTCGGCGACAAAGACGTCAACGCCCCCGTGGCAGAGCAGCAGGCGTCCGCCGACGTCAAG
AGCATGGAGTATCACCGCCAGGTCTTTCAGTCCAAGATGGCCGAGGAAAAATCGGGCAAATATGTCTCGCCGTCC
GACAACATCATGAGCCCATGCACGGCCAAGATCCATGCCCTGCGCAATAAGCATGCTGCCAAGGTCAAGCCCAAG
TCTCTCTTCGCCCAGGCGAGCGCTAAGAAGCTCGGCGGAGAGAATGCTCTGGGAGCGCGGCCCGTCCAGCAGCCC
TGA
Gene >Hirsu2|3530
ATGTCGAGCCACGTCCTCGGCGACAAAGACGTCAACGCCCCCGTGGCAGAGCAGCAGGCGTCCGCCGACGTCAAG
AGCATGGAGTATCACCGCCAGGTCTTTCAGTCCAAGATGGCCGAGGAAAAGTAGCCGCTCCCTTCCCCTTGTCTT
CCGACACGAGACGGCAAAGTGACGGGCCCAGACTAACGATGCATGCGGAAAAGCAGATCGGGCAAATATGTCTCG
CCGTCCGACAACATCATGAGCCCATGCACGGCCAAGATCCATGCCCTGCGCAATAAGCATGCTGCCAAGTCGGTC
CTCCCCGTCCCCCGCTCGCGCTTCCTCCCGTCCCTCCGTCCACGTCTTCGACGAGCATCGCTGACAAGCCCCGTC
CGCTTCACAGGGTCAAGCCCAAGTCTCTCTTCGCCCAGGCGAGCGCTAAGAAGCTCGGCGGAGAGAATGCTCTGG
GAGCGCGGCCCGTCCAGCAGCCCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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