Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3528
Gene name
LocationContig_1929:3698..3935
Strand+
Gene length (bp)237
Transcript length (bp)237
Coding sequence length (bp)237
Protein length (aa) 79

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.177 0.0606 0.8389 0.1902 0.0975 0.138 0.5674 0.4554 0.3304 0.0233

SignalP

SignalP signal predicted Location Score
Yes 1 - 22 0.999767

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup802
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7925
Ophiocordyceps australis map64 (Brazil) OphauB2|4647
Ophiocordyceps camponoti-floridani Ophcf2|02870
Ophiocordyceps camponoti-rufipedis Ophun1|3561
Ophiocordyceps kimflemingae Ophio5|1083
Ophiocordyceps subramaniannii Hirsu2|3528 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8638

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3528
MVGAAAHLACLVALGAVVPALAASEFFVPGPPPYPRWKAGDVHQIRYRTTYTEYTIALWQQFEGAAKLGPIVFRT
SLR*
Coding >Hirsu2|3528
ATGGTGGGCGCCGCCGCGCATCTGGCCTGTCTCGTGGCGCTCGGCGCCGTCGTCCCGGCGCTGGCCGCGTCCGAG
TTCTTCGTGCCCGGGCCGCCGCCCTACCCTCGCTGGAAGGCCGGCGACGTGCACCAGATTCGGTACCGGACCACC
TACACCGAGTACACGATAGCCCTGTGGCAGCAGTTCGAGGGCGCCGCGAAGCTGGGGCCCATCGTCTTCCGTACG
TCCCTCCGTTGA
Transcript >Hirsu2|3528
ATGGTGGGCGCCGCCGCGCATCTGGCCTGTCTCGTGGCGCTCGGCGCCGTCGTCCCGGCGCTGGCCGCGTCCGAG
TTCTTCGTGCCCGGGCCGCCGCCCTACCCTCGCTGGAAGGCCGGCGACGTGCACCAGATTCGGTACCGGACCACC
TACACCGAGTACACGATAGCCCTGTGGCAGCAGTTCGAGGGCGCCGCGAAGCTGGGGCCCATCGTCTTCCGTACG
TCCCTCCGTTGA
Gene >Hirsu2|3528
ATGGTGGGCGCCGCCGCGCATCTGGCCTGTCTCGTGGCGCTCGGCGCCGTCGTCCCGGCGCTGGCCGCGTCCGAG
TTCTTCGTGCCCGGGCCGCCGCCCTACCCTCGCTGGAAGGCCGGCGACGTGCACCAGATTCGGTACCGGACCACC
TACACCGAGTACACGATAGCCCTGTGGCAGCAGTTCGAGGGCGCCGCGAAGCTGGGGCCCATCGTCTTCCGTACG
TCCCTCCGTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail