Protein ID | Hirsu2|3528 |
Gene name | |
Location | Contig_1929:3698..3935 |
Strand | + |
Gene length (bp) | 237 |
Transcript length (bp) | 237 |
Coding sequence length (bp) | 237 |
Protein length (aa) | 79 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.177 | 0.0606 | 0.8389 | 0.1902 | 0.0975 | 0.138 | 0.5674 | 0.4554 | 0.3304 | 0.0233 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 22 | 0.999767 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 7 | 29 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 802 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3528 MVGAAAHLACLVALGAVVPALAASEFFVPGPPPYPRWKAGDVHQIRYRTTYTEYTIALWQQFEGAAKLGPIVFRT SLR* |
Coding | >Hirsu2|3528 ATGGTGGGCGCCGCCGCGCATCTGGCCTGTCTCGTGGCGCTCGGCGCCGTCGTCCCGGCGCTGGCCGCGTCCGAG TTCTTCGTGCCCGGGCCGCCGCCCTACCCTCGCTGGAAGGCCGGCGACGTGCACCAGATTCGGTACCGGACCACC TACACCGAGTACACGATAGCCCTGTGGCAGCAGTTCGAGGGCGCCGCGAAGCTGGGGCCCATCGTCTTCCGTACG TCCCTCCGTTGA |
Transcript | >Hirsu2|3528 ATGGTGGGCGCCGCCGCGCATCTGGCCTGTCTCGTGGCGCTCGGCGCCGTCGTCCCGGCGCTGGCCGCGTCCGAG TTCTTCGTGCCCGGGCCGCCGCCCTACCCTCGCTGGAAGGCCGGCGACGTGCACCAGATTCGGTACCGGACCACC TACACCGAGTACACGATAGCCCTGTGGCAGCAGTTCGAGGGCGCCGCGAAGCTGGGGCCCATCGTCTTCCGTACG TCCCTCCGTTGA |
Gene | >Hirsu2|3528 ATGGTGGGCGCCGCCGCGCATCTGGCCTGTCTCGTGGCGCTCGGCGCCGTCGTCCCGGCGCTGGCCGCGTCCGAG TTCTTCGTGCCCGGGCCGCCGCCCTACCCTCGCTGGAAGGCCGGCGACGTGCACCAGATTCGGTACCGGACCACC TACACCGAGTACACGATAGCCCTGTGGCAGCAGTTCGAGGGCGCCGCGAAGCTGGGGCCCATCGTCTTCCGTACG TCCCTCCGTTGA |