© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3527 |
| Gene name | |
| Location | Contig_1929:175..948 |
| Strand | + |
| Gene length (bp) | 773 |
| Transcript length (bp) | 720 |
| Coding sequence length (bp) | 720 |
| Protein length (aa) | 240 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01328 | Peroxidase_2 | Peroxidase, family 2 | 1.6E-13 | 3 | 148 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q00668|STCC_EMENI | Putative sterigmatocystin biosynthesis peroxidase stcC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=stcC PE=3 SV=2 | 1 | 164 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004601 | peroxidase activity | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | No |
| GO:0016209 | antioxidant activity | No |
| GO:0003674 | molecular_function | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6208 | 0.4437 | 0.34 | 0.0735 | 0.2765 | 0.0449 | 0.0775 | 0.055 | 0.0998 | 0.0169 |
| Orthofinder run ID | 4 |
| Orthogroup | 10 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3527 LSPVICTIITLGGIGKSGKRADVRFKLSAVDKKTWDIEHDASFSRQDAALGNPSVFNPHAWSVTLAELKKCGDEV DLRCWSKARLASLADARRRNPRLVYDRAAAAHIAVEVARVQLALGNKKGVKLANLRELFEHERLPFRLGWRPRMH SATAQDVLELAVESQRLDPVLQRTSNGMVTTRNDLINILKSDIPDFMGVVRETMMRAGFKRRSIYEELDRIEEEK AAASRSGPNRNFNG* |
| Coding | >Hirsu2|3527 CTGTCGCCCGTCATCTGCACCATCATCACGCTCGGCGGCATCGGCAAGAGCGGCAAGCGGGCCGACGTGCGGTTC AAGCTGAGCGCCGTCGACAAGAAGACGTGGGACATCGAGCACGACGCCAGCTTCTCGCGCCAGGACGCCGCCCTC GGCAACCCGTCCGTCTTCAACCCGCACGCCTGGAGCGTGACGCTGGCCGAGCTGAAGAAGTGCGGCGACGAGGTC GACCTGCGCTGCTGGAGCAAGGCCCGGCTGGCCAGCCTGGCGGACGCGCGCCGCCGCAACCCGCGCCTCGTCTAC GACCGCGCCGCCGCCGCCCACATCGCCGTCGAGGTCGCCCGCGTCCAGCTGGCGCTCGGCAACAAGAAGGGCGTC AAGCTGGCGAACCTGCGCGAGCTGTTCGAGCACGAGCGCCTGCCCTTCCGCCTCGGCTGGAGGCCGCGCATGCAC TCGGCCACCGCCCAGGACGTGCTGGAGCTGGCCGTCGAGAGCCAGCGGCTGGACCCGGTCCTGCAGCGGACGAGC AACGGCATGGTCACCACCAGAAACGACCTCATCAACATCCTCAAGTCGGACATCCCCGACTTCATGGGCGTCGTG CGCGAGACGATGATGAGGGCCGGCTTCAAGCGGCGCTCCATCTACGAGGAGCTGGACCGGATCGAGGAAGAAAAG GCTGCTGCCAGCCGCTCGGGGCCGAACAGGAACTTCAATGGCTAA |
| Transcript | >Hirsu2|3527 CTGTCGCCCGTCATCTGCACCATCATCACGCTCGGCGGCATCGGCAAGAGCGGCAAGCGGGCCGACGTGCGGTTC AAGCTGAGCGCCGTCGACAAGAAGACGTGGGACATCGAGCACGACGCCAGCTTCTCGCGCCAGGACGCCGCCCTC GGCAACCCGTCCGTCTTCAACCCGCACGCCTGGAGCGTGACGCTGGCCGAGCTGAAGAAGTGCGGCGACGAGGTC GACCTGCGCTGCTGGAGCAAGGCCCGGCTGGCCAGCCTGGCGGACGCGCGCCGCCGCAACCCGCGCCTCGTCTAC GACCGCGCCGCCGCCGCCCACATCGCCGTCGAGGTCGCCCGCGTCCAGCTGGCGCTCGGCAACAAGAAGGGCGTC AAGCTGGCGAACCTGCGCGAGCTGTTCGAGCACGAGCGCCTGCCCTTCCGCCTCGGCTGGAGGCCGCGCATGCAC TCGGCCACCGCCCAGGACGTGCTGGAGCTGGCCGTCGAGAGCCAGCGGCTGGACCCGGTCCTGCAGCGGACGAGC AACGGCATGGTCACCACCAGAAACGACCTCATCAACATCCTCAAGTCGGACATCCCCGACTTCATGGGCGTCGTG CGCGAGACGATGATGAGGGCCGGCTTCAAGCGGCGCTCCATCTACGAGGAGCTGGACCGGATCGAGGAAGAAAAG GCTGCTGCCAGCCGCTCGGGGCCGAACAGGAACTTCAATGGCTAA |
| Gene | >Hirsu2|3527 CTGTCGCCCGTCATCTGCACCATCATCACGCTCGGCGGCATCGGCAAGAGCGGCAAGCGGGCCGACGTGCGGTTC AAGCTGAGCGCCGTCGACAAGAAGACGTGGGACATCGAGCACGACGCCAGCTTCTCGCGCCAGGACGCCGCCCTC GGCAACCCGTCCGTCTTCAACCCGCACGCCTGGAGCGTGACGCTGGCCGAGCTGAAGAAGTGCGGCGACGAGGTC GACCTGCGCTGCTGGAGCAAGGCCCGGCTGGCCAGCCTGGCGGACGCGCGCCGCCGCAACCCGCGCCTCGTCTAC GACCGCGCCGCCGCCGCCCACATCGCCGTCGAGGTCGCCCGCGTCCAGCTGGCGCTCGGCAACAAGAAGGGCGTC AAGCTGGCGAACCTGCGCGAGCTGTTCGAGCACGAGCGCCTGCCCTTCCGCCTCGGCTGGAGGCCGCGCATGCAC TCGGCCACCGCCCAGGACGTGCTGGAGCTGGCCGTCGAGAGCCAGCGGCTGGACCCGGTCCTGCAGCGGACGAGC AACGGCATGGTCACCACCAGAAACGTACGTCGTCGTCGCGTCCGTCTCGCCCTGCTTCGCTCACTGACGGGCCGC AGGACCTCATCAACATCCTCAAGTCGGACATCCCCGACTTCATGGGCGTCGTGCGCGAGACGATGATGAGGGCCG GCTTCAAGCGGCGCTCCATCTACGAGGAGCTGGACCGGATCGAGGAAGAAAAGGCTGCTGCCAGCCGCTCGGGGC CGAACAGGAACTTCAATGGCTAA |