© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3524 |
| Gene name | |
| Location | Contig_1928:37..628 |
| Strand | + |
| Gene length (bp) | 591 |
| Transcript length (bp) | 591 |
| Coding sequence length (bp) | 591 |
| Protein length (aa) | 197 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.6563 | 0.5205 | 0.15 | 0.1733 | 0.0892 | 0.0172 | 0.0442 | 0.1691 | 0.0869 | 0.001 |
| Orthofinder run ID | 4 |
| Orthogroup | 6606 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|539 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|6234 |
| Ophiocordyceps subramaniannii | Hirsu2|3524 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3524 LARAQALHRFEQACGRLRWKAIDLENAYGRASAPAGWAFAAAEAERNFKVDFHEFYVWIEQAVVLLLKVFGTTVG AAAAAGRWTAAHAYHHNVLKALDDEAHPLHPALGRGDARHALWKAKELRNRWKDAASGQRETPPLRMYDLTWIVS QAMRGLEAAYEVAAARVRHDLHACRAEPAPVQDEWDWMVEPMDWEA* |
| Coding | >Hirsu2|3524 CTGGCGCGGGCGCAGGCGCTGCACCGGTTCGAGCAGGCGTGCGGGCGGCTGCGGTGGAAGGCCATCGACCTGGAG AACGCGTACGGGCGGGCGAGCGCGCCGGCCGGGTGGGCGTTCGCGGCGGCCGAGGCCGAGCGCAACTTCAAGGTC GACTTTCACGAGTTCTACGTCTGGATCGAGCAGGCCGTCGTGCTGCTGCTCAAGGTCTTCGGCACGACCGTCGGC GCCGCAGCCGCGGCCGGGCGCTGGACGGCGGCGCACGCCTACCACCACAACGTGCTCAAGGCGCTCGACGACGAG GCGCACCCGCTGCACCCGGCGCTCGGCCGCGGCGACGCCCGCCACGCGCTCTGGAAGGCCAAGGAGCTGCGCAAC CGGTGGAAGGACGCGGCCTCGGGCCAGCGCGAGACGCCGCCCCTCCGCATGTACGACCTCACCTGGATCGTCTCC CAGGCGATGCGTGGCCTCGAGGCCGCGTACGAGGTCGCCGCCGCCCGCGTCCGCCACGACCTCCATGCCTGCCGG GCCGAGCCGGCGCCCGTCCAGGACGAGTGGGACTGGATGGTCGAGCCCATGGACTGGGAGGCCTGA |
| Transcript | >Hirsu2|3524 CTGGCGCGGGCGCAGGCGCTGCACCGGTTCGAGCAGGCGTGCGGGCGGCTGCGGTGGAAGGCCATCGACCTGGAG AACGCGTACGGGCGGGCGAGCGCGCCGGCCGGGTGGGCGTTCGCGGCGGCCGAGGCCGAGCGCAACTTCAAGGTC GACTTTCACGAGTTCTACGTCTGGATCGAGCAGGCCGTCGTGCTGCTGCTCAAGGTCTTCGGCACGACCGTCGGC GCCGCAGCCGCGGCCGGGCGCTGGACGGCGGCGCACGCCTACCACCACAACGTGCTCAAGGCGCTCGACGACGAG GCGCACCCGCTGCACCCGGCGCTCGGCCGCGGCGACGCCCGCCACGCGCTCTGGAAGGCCAAGGAGCTGCGCAAC CGGTGGAAGGACGCGGCCTCGGGCCAGCGCGAGACGCCGCCCCTCCGCATGTACGACCTCACCTGGATCGTCTCC CAGGCGATGCGTGGCCTCGAGGCCGCGTACGAGGTCGCCGCCGCCCGCGTCCGCCACGACCTCCATGCCTGCCGG GCCGAGCCGGCGCCCGTCCAGGACGAGTGGGACTGGATGGTCGAGCCCATGGACTGGGAGGCCTGA |
| Gene | >Hirsu2|3524 CTGGCGCGGGCGCAGGCGCTGCACCGGTTCGAGCAGGCGTGCGGGCGGCTGCGGTGGAAGGCCATCGACCTGGAG AACGCGTACGGGCGGGCGAGCGCGCCGGCCGGGTGGGCGTTCGCGGCGGCCGAGGCCGAGCGCAACTTCAAGGTC GACTTTCACGAGTTCTACGTCTGGATCGAGCAGGCCGTCGTGCTGCTGCTCAAGGTCTTCGGCACGACCGTCGGC GCCGCAGCCGCGGCCGGGCGCTGGACGGCGGCGCACGCCTACCACCACAACGTGCTCAAGGCGCTCGACGACGAG GCGCACCCGCTGCACCCGGCGCTCGGCCGCGGCGACGCCCGCCACGCGCTCTGGAAGGCCAAGGAGCTGCGCAAC CGGTGGAAGGACGCGGCCTCGGGCCAGCGCGAGACGCCGCCCCTCCGCATGTACGACCTCACCTGGATCGTCTCC CAGGCGATGCGTGGCCTCGAGGCCGCGTACGAGGTCGCCGCCGCCCGCGTCCGCCACGACCTCCATGCCTGCCGG GCCGAGCCGGCGCCCGTCCAGGACGAGTGGGACTGGATGGTCGAGCCCATGGACTGGGAGGCCTGA |