© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3522 |
| Gene name | |
| Location | Contig_1927:1241..2968 |
| Strand | + |
| Gene length (bp) | 1727 |
| Transcript length (bp) | 1419 |
| Coding sequence length (bp) | 1419 |
| Protein length (aa) | 473 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P50082|AMA1_YEAST | Meiosis-specific APC/C activator protein AMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AMA1 PE=1 SV=2 | 60 | 472 | 8.0E-42 |
| sp|Q09786|YA98_SCHPO | Uncharacterized WD repeat-containing protein C13G6.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC13G6.08 PE=3 SV=1 | 14 | 469 | 9.0E-42 |
| sp|O94411|MFR2_SCHPO | Meiotic fizzy-related protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfr2 PE=1 SV=1 | 74 | 467 | 1.0E-37 |
| sp|Q8LPL5|FZR3_ARATH | Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN=FZR3 PE=1 SV=1 | 86 | 448 | 4.0E-23 |
| sp|Q9S7I8|CDC22_ARATH | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-2 PE=1 SV=1 | 61 | 438 | 7.0E-23 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P50082|AMA1_YEAST | Meiosis-specific APC/C activator protein AMA1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AMA1 PE=1 SV=2 | 60 | 472 | 8.0E-42 |
| sp|Q09786|YA98_SCHPO | Uncharacterized WD repeat-containing protein C13G6.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC13G6.08 PE=3 SV=1 | 14 | 469 | 9.0E-42 |
| sp|O94411|MFR2_SCHPO | Meiotic fizzy-related protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfr2 PE=1 SV=1 | 74 | 467 | 1.0E-37 |
| sp|Q8LPL5|FZR3_ARATH | Protein FIZZY-RELATED 3 OS=Arabidopsis thaliana GN=FZR3 PE=1 SV=1 | 86 | 448 | 4.0E-23 |
| sp|Q9S7I8|CDC22_ARATH | Cell division cycle 20.2, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-2 PE=1 SV=1 | 61 | 438 | 7.0E-23 |
| sp|Q9SZA4|CDC21_ARATH | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-1 PE=1 SV=1 | 61 | 438 | 1.0E-22 |
| sp|P78972|SLP1_SCHPO | WD repeat-containing protein slp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=slp1 PE=1 SV=1 | 69 | 438 | 2.0E-22 |
| sp|Q3E906|CD205_ARATH | Cell division cycle 20.5, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-5 PE=1 SV=2 | 68 | 438 | 2.0E-22 |
| sp|Q9UM11|FZR_HUMAN | Fizzy-related protein homolog OS=Homo sapiens GN=FZR1 PE=1 SV=2 | 65 | 439 | 3.0E-22 |
| sp|Q9S7H3|CD203_ARATH | Cell division cycle 20.3, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-3 PE=3 SV=1 | 61 | 438 | 3.0E-22 |
| sp|Q8L3Z8|FZR2_ARATH | Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1 | 78 | 450 | 3.0E-22 |
| sp|Q9R1K5|FZR_MOUSE | Fizzy-related protein homolog OS=Mus musculus GN=Fzr1 PE=1 SV=1 | 65 | 439 | 7.0E-22 |
| sp|Q4PSE4|CDC24_ARATH | Cell division cycle 20.4, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-4 PE=2 SV=1 | 68 | 438 | 4.0E-21 |
| sp|O13286|SRW1_SCHPO | WD repeat-containing protein srw1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=srw1 PE=1 SV=1 | 78 | 441 | 8.0E-21 |
| sp|Q9JJ66|CDC20_MOUSE | Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20 PE=1 SV=2 | 67 | 388 | 7.0E-20 |
| sp|Q62623|CDC20_RAT | Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2 | 67 | 388 | 8.0E-20 |
| sp|O94423|MFR1_SCHPO | Meiotic fizzy-related protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mfr1 PE=1 SV=1 | 77 | 441 | 1.0E-19 |
| sp|Q12834|CDC20_HUMAN | Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2 | 67 | 388 | 1.0E-18 |
| sp|Q5H7C0|CDC20_PIG | Cell division cycle protein 20 homolog OS=Sus scrofa GN=CDC20 PE=2 SV=1 | 67 | 388 | 1.0E-18 |
| sp|P26309|CDC20_YEAST | APC/C activator protein CDC20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC20 PE=1 SV=2 | 48 | 388 | 2.0E-18 |
| sp|P53197|CDH1_YEAST | APC/C activator protein CDH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDH1 PE=1 SV=1 | 78 | 444 | 3.0E-17 |
| sp|Q54KM3|CDH1_DICDI | Anaphase-promoting complex subunit cdh1 OS=Dictyostelium discoideum GN=cdh1 PE=3 SV=1 | 298 | 403 | 4.0E-15 |
| sp|Q8VZS9|FZR1_ARATH | Protein FIZZY-RELATED 1 OS=Arabidopsis thaliana GN=FZR1 PE=1 SV=1 | 299 | 452 | 3.0E-14 |
| sp|F4K5R6|CDC26_ARATH | Cell division cycle 20.6, cofactor of APC complex OS=Arabidopsis thaliana GN=CDC20-6 PE=3 SV=1 | 227 | 437 | 3.0E-14 |
| sp|Q86Y33|CD20B_HUMAN | Cell division cycle protein 20 homolog B OS=Homo sapiens GN=CDC20B PE=1 SV=3 | 302 | 364 | 9.0E-08 |
| sp|Q54MZ3|CDC20_DICDI | Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum GN=cdc20 PE=1 SV=1 | 78 | 218 | 2.0E-06 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal|Nuclear export signal | 0.6186 | 0.757 | 0.0787 | 0.0497 | 0.0441 | 0.0119 | 0.0505 | 0.1642 | 0.122 | 0.0368 |
| Orthofinder run ID | 4 |
| Orthogroup | 5142 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3522 MSSLIEAAAHDDLETYRCFVASALEICRIGKILDFNPYLINVRTTIRSDLRLTCWATHYGSHRHSAYHQRLPNSH SKKTVPAAPLRVLDAPSLRDDFYCSVLAYSATCQTLAICLGNLVYTWSERFGPGKKTILAAGRSDGSVVLMCHND GLPRFEVQQPHSVTCTEELVVGDETGTLYYYVVEWSLTQQICGLAWSPCAQHLASGGNDNLCCLFDVSKILGHAQ WLDPKYRNGRLVRGQQLIGDHTHHVCYNTRALRHIATKIETGTSQSVTNVHTTRACLEVVQSLGTGCATHLWIHQ AAVKAIAFCPWRTGLIATGGGSNDKCIHFFHTTSGSALATIAVGAQVTSLIWSTTRREIAATFGYSQPEHFYRVA IFSWPECQQVAVIPWKADLRALYAIPYPSRIGVPGGPTHSLGSSEGCIVIASSDETVRFHEVWSAKDNKTVAKFG LLGGSDVLEDLDGMTKENDIIR* |
| Coding | >Hirsu2|3522 ATGTCTTCCTTGATCGAGGCAGCTGCTCATGATGACCTCGAAACCTACCGTTGTTTCGTGGCTTCCGCGCTAGAG ATTTGTCGTATCGGTAAAATTCTCGACTTCAACCCTTACCTCATCAATGTCAGAACAACAATTAGGTCTGACCTT CGACTTACCTGCTGGGCAACGCATTACGGCAGCCATCGGCACTCGGCGTATCATCAACGCCTCCCCAATTCGCAC TCAAAAAAGACAGTTCCGGCGGCGCCTTTGAGAGTCCTTGATGCACCGAGCTTAAGAGATGACTTCTACTGCTCT GTCTTAGCATATTCGGCGACGTGCCAAACTCTAGCAATATGCCTTGGGAACTTAGTCTACACCTGGTCGGAACGG TTTGGGCCTGGGAAGAAGACCATCCTTGCAGCTGGTAGATCTGACGGCTCGGTCGTCCTAATGTGTCACAACGAC GGGCTACCAAGATTTGAGGTGCAGCAGCCGCATTCAGTCACATGCACAGAGGAGCTAGTGGTTGGAGACGAAACA GGTACTCTATATTATTACGTGGTCGAGTGGTCTTTGACTCAGCAGATATGTGGACTAGCGTGGTCTCCTTGCGCT CAGCACCTGGCATCGGGTGGCAACGACAACCTCTGTTGCCTGTTCGACGTGAGCAAAATCCTCGGCCATGCTCAA TGGCTGGACCCGAAGTATCGCAACGGACGTCTCGTCAGGGGACAGCAGCTGATTGGGGATCACACGCATCATGTG TGCTATAACACGCGCGCACTAAGGCATATTGCGACCAAAATTGAAACCGGGACGAGCCAGAGTGTGACCAACGTG CACACGACACGGGCATGCCTAGAAGTCGTTCAAAGTTTAGGTACTGGTTGTGCGACGCACCTTTGGATTCATCAA GCCGCAGTCAAGGCCATTGCCTTCTGCCCTTGGCGCACGGGACTGATCGCCACCGGTGGAGGCTCCAACGATAAA TGCATTCACTTTTTCCATACAACGTCAGGCTCGGCCCTGGCCACCATCGCGGTGGGCGCACAGGTCACATCCCTG ATTTGGTCAACAACACGGCGTGAAATCGCAGCCACGTTTGGCTACTCTCAACCAGAACATTTCTATCGTGTCGCT ATCTTCAGCTGGCCCGAGTGTCAACAAGTGGCGGTTATACCATGGAAGGCTGATTTGAGGGCCTTGTACGCGATT CCTTATCCCTCGCGTATCGGGGTACCGGGCGGGCCGACACATAGTCTGGGCTCGTCTGAGGGATGCATTGTGATC GCATCAAGCGATGAGACCGTAAGGTTTCACGAAGTTTGGTCAGCCAAAGACAACAAAACCGTGGCAAAGTTCGGT CTGCTTGGTGGAAGTGATGTACTCGAAGACTTGGACGGTATGACGAAAGAAAATGACATCATCCGCTGA |
| Transcript | >Hirsu2|3522 ATGTCTTCCTTGATCGAGGCAGCTGCTCATGATGACCTCGAAACCTACCGTTGTTTCGTGGCTTCCGCGCTAGAG ATTTGTCGTATCGGTAAAATTCTCGACTTCAACCCTTACCTCATCAATGTCAGAACAACAATTAGGTCTGACCTT CGACTTACCTGCTGGGCAACGCATTACGGCAGCCATCGGCACTCGGCGTATCATCAACGCCTCCCCAATTCGCAC TCAAAAAAGACAGTTCCGGCGGCGCCTTTGAGAGTCCTTGATGCACCGAGCTTAAGAGATGACTTCTACTGCTCT GTCTTAGCATATTCGGCGACGTGCCAAACTCTAGCAATATGCCTTGGGAACTTAGTCTACACCTGGTCGGAACGG TTTGGGCCTGGGAAGAAGACCATCCTTGCAGCTGGTAGATCTGACGGCTCGGTCGTCCTAATGTGTCACAACGAC GGGCTACCAAGATTTGAGGTGCAGCAGCCGCATTCAGTCACATGCACAGAGGAGCTAGTGGTTGGAGACGAAACA GGTACTCTATATTATTACGTGGTCGAGTGGTCTTTGACTCAGCAGATATGTGGACTAGCGTGGTCTCCTTGCGCT CAGCACCTGGCATCGGGTGGCAACGACAACCTCTGTTGCCTGTTCGACGTGAGCAAAATCCTCGGCCATGCTCAA TGGCTGGACCCGAAGTATCGCAACGGACGTCTCGTCAGGGGACAGCAGCTGATTGGGGATCACACGCATCATGTG TGCTATAACACGCGCGCACTAAGGCATATTGCGACCAAAATTGAAACCGGGACGAGCCAGAGTGTGACCAACGTG CACACGACACGGGCATGCCTAGAAGTCGTTCAAAGTTTAGGTACTGGTTGTGCGACGCACCTTTGGATTCATCAA GCCGCAGTCAAGGCCATTGCCTTCTGCCCTTGGCGCACGGGACTGATCGCCACCGGTGGAGGCTCCAACGATAAA TGCATTCACTTTTTCCATACAACGTCAGGCTCGGCCCTGGCCACCATCGCGGTGGGCGCACAGGTCACATCCCTG ATTTGGTCAACAACACGGCGTGAAATCGCAGCCACGTTTGGCTACTCTCAACCAGAACATTTCTATCGTGTCGCT ATCTTCAGCTGGCCCGAGTGTCAACAAGTGGCGGTTATACCATGGAAGGCTGATTTGAGGGCCTTGTACGCGATT CCTTATCCCTCGCGTATCGGGGTACCGGGCGGGCCGACACATAGTCTGGGCTCGTCTGAGGGATGCATTGTGATC GCATCAAGCGATGAGACCGTAAGGTTTCACGAAGTTTGGTCAGCCAAAGACAACAAAACCGTGGCAAAGTTCGGT CTGCTTGGTGGAAGTGATGTACTCGAAGACTTGGACGGTATGACGAAAGAAAATGACATCATCCGCTGA |
| Gene | >Hirsu2|3522 ATGTCTTCCTTGATCGAGGCAGCTGCTCATGATGACCTCGAAACCTACCGTTGTTTCGTGGCTTCCGCGCTAGAG ATTTGTCGTATCGGTAAAATTCTCGACTTCAACCCTTACCTCATCAATGTCAGAACAACAATTAGGTCTGACCTT CGACTTACCTGCTGGGCAACGCATTACGGCAGCCATCGGCACTCGGCGTATCATCAACGTGCGCCAGTTTTCGGA ATAGGGCTGCGGTGTATCTTCATGGCTGACGGTATAATAGGCCTCCCCAATTCGCACTCAAAAAAGACAGTTCCG GCGGCGCCTTTGAGGTATTAGCACCGTGTCCCATTGTACTCGCGGACTGCTGACCGACTCGAAGAGTCCTTGATG CACCGAGCTTAAGAGATGACTTCTACTGCTCTGTCTTAGCATATTCGGCGACGTGCCAAACTCTAGCAATATGCC TTGGGAACTTAGTCTACACCTGGTCGGAACGGTTTGGGGTTCGTATGGTCAACGGAACGCAAGCCAGCAACGTCT GGCTTACTTCTATTGATTTTTCATCCCAGCCTGGGAAGAAGACCATCCTTGCAGCTGGTAGATCTGACGGCTCGG TCGTCCTAATGTGTCACAACGACGGGCTACCAAGATTTGAGGTGCAGCAGCCGCATTCAGTCACATGCGTGAGTT GGCGTCCATGTGACATCACGCGCCCATCACGAAACCCGCTAAATCCCGACGTGAATATTAAGACAGAGGAGCTAG TGGTTGGAGACGAAACAGGTACTCTATATTATTACGTGGTCGAGTGGTCTTTGACGTAGGGAATTTCGCGAGACA ACTGGCCCGGTTCCATCTCACTTGTTGCCAGACTGTCATTTCACAGTCAGCAGATATGTGGACTAGCGTGGTCTC CTTGCGCTCAGCACCTGGCATCGGGTGGCAACGACAACCTCTGTTGCCTGTTCGACGTGAGCAAAATCCTCGGCC ATGCTCAATGGCTGGACCCGAAGTATCGCAACGGACGTCTCGTCAGGGGACAGCAGCTGATTGGGGATCACACGC ATCATGTGTGCTATAACACGCGCGCACTAAGGCATATTGCGACCAAAATTGAAACCGGGACGAGCCAGAGTGTGA CCAACGTGCACACGACACGGGCATGCCTAGAAGTCGTTCAAAGTTTAGGTACTGGTTGTGCGACGCACCTTTGGA TTCATCAAGCCGCAGTCAAGGCCATTGCCTTCTGCCCTTGGCGCACGGGACTGATCGCCACCGGTGGAGGCTCCA ACGATAAATGCATTCACTTTTTCCATACAACGTCAGGCTCGGCCCTGGCCACCATCGCGGTGGGCGCACAGGTCA CATCCCTGATTTGGTCAACAACACGGCGTGAAATCGCAGCCACGTTTGGCTACTCTCAACCAGAACATTTCTATC GTGTCGCTATCTTCAGCTGGCCCGAGTGTCAACAAGTGGCGGTTATACCATGGAAGGCTGATTTGAGGGCCTTGT ACGCGATTCCTTATCCCTCGCGTATCGGGGTACCGGGCGGGCCGACACATAGTCTGGGCTCGTCTGAGGGATGCA TTGTGATCGCATCAAGCGATGAGACCGTAAGGTTTCACGAAGTTTGGTCAGCCAAAGACAACAAAACCGTGGCAA AGTTCGGTCTGCTTGGTGGAAGTGATGTACTCGAAGACTTGGACGGTATGACGAAAGAAAATGACATCATCCGCT GA |