Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3521
Gene name
LocationContig_1926:3328..4217
Strand+
Gene length (bp)889
Transcript length (bp)699
Coding sequence length (bp)699
Protein length (aa) 233

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13967 RSN1_TM Late exocytosis, associated with Golgi transport 5.7E-46 31 182

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q03516|RSN1_YEAST Uncharacterized protein RSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSN1 PE=1 SV=1 31 226 7.0E-38
sp|Q12252|PHM7_YEAST Phosphate metabolism protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM7 PE=1 SV=1 27 224 2.0E-29
sp|Q09766|YA7D_SCHPO Uncharacterized membrane protein C24H6.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24H6.13 PE=1 SV=1 35 226 6.0E-26
sp|F4HYR3|CSCL6_ARATH CSC1-like protein At1g62320 OS=Arabidopsis thaliana GN=At1g62320 PE=3 SV=2 82 216 9.0E-11
sp|B5TYT3|CSCL7_ARATH CSC1-like protein At1g11960 OS=Arabidopsis thaliana GN=At1g11960 PE=2 SV=1 30 216 3.0E-10
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Swissprot ID Swissprot Description Start End E-value
sp|Q03516|RSN1_YEAST Uncharacterized protein RSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSN1 PE=1 SV=1 31 226 7.0E-38
sp|Q12252|PHM7_YEAST Phosphate metabolism protein 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PHM7 PE=1 SV=1 27 224 2.0E-29
sp|Q09766|YA7D_SCHPO Uncharacterized membrane protein C24H6.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC24H6.13 PE=1 SV=1 35 226 6.0E-26
sp|F4HYR3|CSCL6_ARATH CSC1-like protein At1g62320 OS=Arabidopsis thaliana GN=At1g62320 PE=3 SV=2 82 216 9.0E-11
sp|B5TYT3|CSCL7_ARATH CSC1-like protein At1g11960 OS=Arabidopsis thaliana GN=At1g11960 PE=2 SV=1 30 216 3.0E-10
sp|Q9LVE4|CSCL4_ARATH CSC1-like protein At3g21620 OS=Arabidopsis thaliana GN=At3g21620 PE=2 SV=1 58 216 3.0E-09
sp|Q8VZM5|CSCL3_ARATH CSC1-like protein At4g15430 OS=Arabidopsis thaliana GN=At4g15430 PE=2 SV=1 39 216 2.0E-08
sp|Q9XEA1|CSCL5_ARATH Protein OSCA1 OS=Arabidopsis thaliana GN=OSCA1 PE=1 SV=1 82 216 5.0E-08
sp|Q5XEZ5|CSC1_ARATH Calcium permeable stress-gated cation channel 1 OS=Arabidopsis thaliana GN=CSC1 PE=2 SV=1 82 216 4.0E-07
sp|Q06538|CSC1_YEAST Calcium permeable stress-gated cation channel 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CSC1 PE=1 SV=1 46 227 7.0E-07
sp|O43022|YGV8_SCHPO Uncharacterized protein C354.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC354.08c PE=3 SV=1 71 215 1.0E-06
sp|Q9SY14|CSCL2_ARATH CSC1-like protein At4g02900 OS=Arabidopsis thaliana GN=At4g02900 PE=3 SV=1 82 216 2.0E-06
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Lysosome/Vacuole Transmembrane domain 0.1119 0.1548 0.0155 0.4505 0.1728 0.0035 0.373 0.624 0.4994 0.0186

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 109 131 22
3 161 180 19

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup112
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2966
Ophiocordyceps australis 1348a (Ghana) OphauG2|3506
Ophiocordyceps australis map64 (Brazil) OphauB2|6792
Ophiocordyceps australis map64 (Brazil) OphauB2|79
Ophiocordyceps camponoti-floridani Ophcf2|05907
Ophiocordyceps camponoti-floridani Ophcf2|06354
Ophiocordyceps camponoti-rufipedis Ophun1|2163
Ophiocordyceps camponoti-rufipedis Ophun1|7272
Ophiocordyceps kimflemingae Ophio5|2504
Ophiocordyceps kimflemingae Ophio5|4844
Ophiocordyceps subramaniannii Hirsu2|1756
Ophiocordyceps subramaniannii Hirsu2|3521 (this protein)
Ophiocordyceps subramaniannii Hirsu2|9361

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3521
MGAFVSWIKDNLDTNNGAPPPDTKPQSISGMISTLVPVLVISALYLLFFLVFRRSQRRYYAPRTYLGSLPHNRRS
PDLPAGWFNWLGTFWKIPDAYALTHQSLDAYLFLRYLRVAMIICFVSLCITWPILFPVNATGKNGQAQLEMLSYS
NINQERESGRFYAHVFVGWAVYGFVMYMIMRECIFYINLRQAYLLAPHYSRRISSRTVLFTAVPSDYLDEARIRQ
MSATRWP*
Coding >Hirsu2|3521
ATGGGGGCCTTCGTCAGCTGGATCAAGGACAACCTCGACACCAACAATGGCGCGCCGCCGCCCGACACGAAGCCC
CAGTCGATATCGGGCATGATCTCGACGCTGGTGCCCGTGCTCGTCATCTCGGCCCTCTACCTGCTCTTCTTCCTC
GTCTTCAGGAGGTCCCAGCGCCGGTACTATGCCCCGAGGACCTACCTCGGCTCCCTGCCGCACAACCGCCGGAGC
CCCGACCTGCCCGCTGGCTGGTTCAACTGGCTCGGCACCTTCTGGAAGATACCGGACGCCTACGCCCTCACCCAC
CAGAGCCTCGACGCCTACCTCTTCCTGCGCTACCTGCGCGTCGCCATGATCATCTGCTTCGTCAGCCTCTGCATC
ACCTGGCCCATCCTCTTCCCCGTCAACGCGACCGGCAAGAACGGCCAGGCCCAGCTCGAGATGCTGTCGTACAGC
AACATCAACCAGGAGCGCGAGTCCGGCCGCTTCTACGCCCACGTCTTCGTCGGCTGGGCCGTCTACGGCTTCGTC
ATGTACATGATCATGCGCGAGTGCATCTTCTACATCAACCTGCGCCAGGCCTACCTGCTCGCCCCCCACTACTCG
CGCCGCATCTCCTCCCGCACCGTCCTCTTCACCGCCGTCCCCTCCGACTACCTCGACGAGGCCCGCATCCGCCAA
ATGAGCGCGACGAGGTGGCCATGA
Transcript >Hirsu2|3521
ATGGGGGCCTTCGTCAGCTGGATCAAGGACAACCTCGACACCAACAATGGCGCGCCGCCGCCCGACACGAAGCCC
CAGTCGATATCGGGCATGATCTCGACGCTGGTGCCCGTGCTCGTCATCTCGGCCCTCTACCTGCTCTTCTTCCTC
GTCTTCAGGAGGTCCCAGCGCCGGTACTATGCCCCGAGGACCTACCTCGGCTCCCTGCCGCACAACCGCCGGAGC
CCCGACCTGCCCGCTGGCTGGTTCAACTGGCTCGGCACCTTCTGGAAGATACCGGACGCCTACGCCCTCACCCAC
CAGAGCCTCGACGCCTACCTCTTCCTGCGCTACCTGCGCGTCGCCATGATCATCTGCTTCGTCAGCCTCTGCATC
ACCTGGCCCATCCTCTTCCCCGTCAACGCGACCGGCAAGAACGGCCAGGCCCAGCTCGAGATGCTGTCGTACAGC
AACATCAACCAGGAGCGCGAGTCCGGCCGCTTCTACGCCCACGTCTTCGTCGGCTGGGCCGTCTACGGCTTCGTC
ATGTACATGATCATGCGCGAGTGCATCTTCTACATCAACCTGCGCCAGGCCTACCTGCTCGCCCCCCACTACTCG
CGCCGCATCTCCTCCCGCACCGTCCTCTTCACCGCCGTCCCCTCCGACTACCTCGACGAGGCCCGCATCCGCCAA
ATGAGCGCGACGAGGTGGCCATGA
Gene >Hirsu2|3521
ATGGGGGCCTTCGTCAGCTGGATCAAGGACAACCTCGACACCAACAATGGCGCGCCGCCGCCCGACACGAAGCCC
CAGTCGATATCGGGTGCGTCTTGTCCCGACGCCCAACATCTCGGCTGACTGTGCGACTGACCGACCGCAGGCATG
ATCTCGACGCTGGTGCCCGTGCTCGTCATCTCGGCCCTCTACCTGCTCTTCTTCCTCGTCTTCAGGAGGTCCCAG
CGCCGGTACTATGCCCCGAGGACCTACCTCGGCTCCCTGCCGCACAAGTAAGCGTCGAGGCCGCCCCGTCCCCCC
CCCCCCCCTCCGGACGCCCGCTGACCGGCTCTCGCCAGCCGCCGGAGCCCCGACCTGCCCGCTGGCTGGTTCAAC
TGGCTCGGCACCTTCTGGAAGATACCGGACGCCTACGCCCTCACCCACCAGAGCCTCGACGCCTACCTCTTCCTG
CGCTACCTGCGCGTCGCCATGATCATCTGCTTCGTCAGCCTCTGCATCACCTGGCCCATCCTCTTCCCCGTCAAC
GCGACCGGCAAGAACGGCCAGGCCCAGCTCGAGATGCTGTCGTACAGCAACATCAACCAGGAGCGCGAGTCCGGC
CGCTTCTACGCCCACGTCTTCGTCGGCTGGGCCGTCTACGGCTTCGTCATGTACATGATCATGCGCGAGTGCATC
TTCTACATCAACCTGCGCCAGGCCTACCTGCTCGCCCCCCACTACTCGCGCCGCATCTCCTCCCGCACCGTCCTC
TTCACCGCCGTCCCCTCCGACTACCTCGACGAGGCCCGCATCCGCCAAATGTTCAACGACTCGGTCCGCCGCGTC
TGGATCGCCGGCAAGGCCGACAAGCTCGACGAGATGGTCGAGGAGCGCGACGAGGTGGCCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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