© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3520 |
| Gene name | |
| Location | Contig_1926:1869..2381 |
| Strand | - |
| Gene length (bp) | 512 |
| Transcript length (bp) | 447 |
| Coding sequence length (bp) | 447 |
| Protein length (aa) | 149 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | 0.5479 | 0.6182 | 0.2467 | 0.1136 | 0.1274 | 0.2141 | 0.1125 | 0.1355 | 0.1104 | 0.0121 |
| Orthofinder run ID | 4 |
| Orthogroup | 9372 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3520 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3520 MCRAPPPASLSQPKGLWAGTDQDGRMGGRGRGRRARPIADDDEGREEKGRRGRRSKTGCGVLASRDDEEDDDDDI WYIVRQVPLPKPRGGSRGAAPAATGGWSEPKTKAVDASARSSLCVRSRSAVARLDRSPTQAPQLSYPSNNYQY* |
| Coding | >Hirsu2|3520 ATGTGCCGGGCCCCCCCCCCGGCCAGCCTGTCTCAGCCCAAAGGGCTCTGGGCCGGGACCGATCAGGACGGGCGC ATGGGCGGGCGAGGCCGAGGCCGACGGGCGCGGCCAATCGCCGACGACGACGAGGGACGCGAGGAGAAGGGAAGG AGAGGGAGAAGAAGCAAGACGGGATGCGGCGTGCTGGCCAGCAGAGACGACGAGGAGGATGACGATGACGATATA TGGTACATAGTCCGTCAGGTGCCTTTACCTAAGCCTCGGGGCGGCTCGCGTGGCGCAGCGCCAGCAGCCACGGGT GGCTGGAGCGAGCCGAAGACAAAGGCTGTTGATGCGTCAGCGCGTTCCTCACTTTGTGTTCGTTCTCGATCGGCC GTGGCCCGCCTCGATCGCTCGCCCACGCAGGCGCCACAGCTGAGTTATCCAAGCAACAACTACCAGTACTGA |
| Transcript | >Hirsu2|3520 ATGTGCCGGGCCCCCCCCCCGGCCAGCCTGTCTCAGCCCAAAGGGCTCTGGGCCGGGACCGATCAGGACGGGCGC ATGGGCGGGCGAGGCCGAGGCCGACGGGCGCGGCCAATCGCCGACGACGACGAGGGACGCGAGGAGAAGGGAAGG AGAGGGAGAAGAAGCAAGACGGGATGCGGCGTGCTGGCCAGCAGAGACGACGAGGAGGATGACGATGACGATATA TGGTACATAGTCCGTCAGGTGCCTTTACCTAAGCCTCGGGGCGGCTCGCGTGGCGCAGCGCCAGCAGCCACGGGT GGCTGGAGCGAGCCGAAGACAAAGGCTGTTGATGCGTCAGCGCGTTCCTCACTTTGTGTTCGTTCTCGATCGGCC GTGGCCCGCCTCGATCGCTCGCCCACGCAGGCGCCACAGCTGAGTTATCCAAGCAACAACTACCAGTACTGA |
| Gene | >Hirsu2|3520 ATGTGCCGGGCCCCCCCCCCGGCCAGCCTGTCTCAGCCCAAAGGGCTCTGGGCCGGGACCGATCAGGACGGGCGC ATGGGCGGGCGAGGCCGAGGCCGACGGGCGCGGCCAATCGCCGACGACGACGAGGGACGCGAGGAGAAGGGAAGG AGAGGGAGAAGAAGCAAGACGGGATGCGGCGTGCTGGCCAGCAGAGACGACGAGGAGGATGACGATGACGATATA TGGTACATAGTCCGTCAGGTGCCTTTACCTAAGCCTCGGGTGAGTAGGGCGGGTCAGTCCCCTAGCGGTCCGCCT AGCGCCAGGCACTCCTCCGACCGGCGCAGGGCGGCTCGCGTGGCGCAGCGCCAGCAGCCACGGGTGGCTGGAGCG AGCCGAAGACAAAGGCTGTTGATGCGTCAGCGCGTTCCTCACTTTGTGTTCGTTCTCGATCGGCCGTGGCCCGCC TCGATCGCTCGCCCACGCAGGCGCCACAGCTGAGTTATCCAAGCAACAACTACCAGTACTGA |