© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3516 |
| Gene name | |
| Location | Contig_1923:335..2901 |
| Strand | - |
| Gene length (bp) | 2566 |
| Transcript length (bp) | 2076 |
| Coding sequence length (bp) | 2076 |
| Protein length (aa) | 692 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.6382 | 0.7872 | 0.1846 | 0.0677 | 0.0829 | 0.0098 | 0.0941 | 0.1134 | 0.029 | 0.0173 |
| Orthofinder run ID | 4 |
| Orthogroup | 2451 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3516 MSQGNGSTCHHGHEEKMAKLSDSLGQHTDGQASMLPCWSEPAMSSSLALGIPLAKQMTNLSLLLCPCSGLGWGQP DGYCPLPEASPAVYDPHQPYGAEKQPYMQMPMPSQNGRGGLPFVEPEQYSPVQGDQGPNALSLTTYSDQEHMQLA SPPDSAKDVFFPHDRSSLAPYSDDYMTQDLHSPNGMAFTPGYMRNDSQPHLSSVSDFGDSLGPHSASLHGISGCA DVSPFGMLAVGGVADQAPLGVWNDSSISHQPSNFDVLMPDQRGGKRGPFKDPKLREQTAQTRRTGSCIRCRMQRI RCESDPENPSGVCLTCTNVANTKAGRFPCLRYKITDMKLYKPGQVPGYEWTRRWTNSITDPIQKWASPDVKIIRV SAGYSMRCIELQVRKFIPQDGDKLVRTWDFQGTRRSVAIPPYALIDLEETKSTYSAHIQDIMTDTIQHVLERPDG LLCETYFRAVQLMSSPSTSVDSAKLLRLTLTLWVSIRLSTTSGFLVGDETLGMPRDILDETNPNAGKIPMPPVLG AQLDLVLIHHIQTKLRREMLEVLQKMVLKNKQVTWFVTYLVTFILLHNASLITAHDAGYARKHGMKRRFAREDKV REYHLGANILLAHFHYCNKGMYPFSDECKDKDLRTLADLGDEELQFVHATRDYVKRHRRAWEQLRTDGEYEDDFF FVSQLFEENWKPQSTI* |
| Coding | >Hirsu2|3516 ATGTCTCAAGGAAACGGCTCGACCTGCCATCATGGTCACGAGGAGAAGATGGCCAAGCTGAGCGACTCCTTGGGC CAGCACACGGACGGCCAGGCGTCCATGCTCCCCTGCTGGTCCGAGCCGGCCATGTCGTCCTCGCTCGCGCTGGGG ATACCGCTGGCCAAGCAAATGACCAACCTCAGCTTGTTGCTGTGTCCCTGCTCCGGCTTGGGCTGGGGCCAGCCT GATGGCTATTGCCCTCTTCCCGAGGCATCGCCCGCTGTTTATGACCCACATCAGCCCTACGGCGCAGAGAAGCAG CCGTACATGCAGATGCCCATGCCATCACAGAATGGGCGGGGCGGGCTGCCGTTCGTGGAGCCGGAGCAGTACAGC CCCGTGCAAGGTGATCAAGGACCGAACGCCCTGTCTCTGACCACCTACTCGGACCAAGAGCACATGCAGTTGGCG TCTCCTCCCGACAGCGCCAAGGATGTCTTCTTCCCCCATGATCGATCTTCGCTCGCCCCTTACTCCGATGATTAT ATGACACAGGACCTTCACTCGCCGAACGGCATGGCGTTCACTCCCGGGTACATGCGGAACGATAGCCAGCCCCAC CTCAGTTCGGTCTCCGACTTCGGCGACTCGCTCGGTCCTCACTCCGCGTCGCTCCATGGCATCTCGGGATGCGCG GACGTCTCGCCCTTCGGCATGCTGGCCGTCGGCGGTGTAGCCGATCAAGCGCCCCTGGGAGTTTGGAACGACTCG TCCATCTCCCACCAGCCATCGAATTTCGATGTTCTCATGCCGGACCAGCGAGGCGGCAAGAGAGGTCCGTTCAAG GATCCAAAGCTGCGCGAGCAGACGGCGCAGACCAGGCGCACAGGGTCATGCATCAGGTGTCGGATGCAGCGTATA CGTTGTGAATCCGACCCGGAGAATCCCAGTGGGGTGTGTTTGACCTGCACAAACGTGGCCAACACCAAGGCGGGA CGCTTCCCGTGCCTCAGATACAAGATAACCGACATGAAGCTGTATAAGCCCGGCCAGGTCCCCGGATACGAGTGG ACTCGCCGGTGGACAAACAGTATCACGGACCCCATCCAGAAATGGGCATCTCCCGACGTCAAGATTATTCGCGTC TCGGCCGGCTATTCGATGAGATGTATAGAGCTGCAAGTCCGGAAGTTCATACCACAGGACGGCGACAAACTTGTC CGGACTTGGGATTTTCAAGGGACAAGGAGGTCGGTGGCAATCCCGCCCTACGCTTTGATCGATTTGGAGGAGACG AAATCGACGTACTCGGCGCACATCCAAGACATCATGACGGACACGATCCAGCACGTGCTGGAGCGCCCGGACGGT CTTCTCTGCGAGACTTACTTCCGCGCGGTGCAGCTGATGAGCAGCCCGTCGACGTCGGTGGACTCGGCCAAGCTT CTCCGTCTGACGCTGACGCTGTGGGTCTCGATCCGCCTCTCGACCACGTCGGGCTTCCTGGTGGGCGACGAGACG CTGGGGATGCCGAGAGACATCTTGGACGAGACGAACCCCAACGCGGGCAAGATCCCGATGCCTCCGGTCCTCGGG GCGCAGCTGGATCTCGTGCTCATCCACCACATCCAGACAAAACTCCGGAGGGAGATGCTGGAGGTCTTGCAGAAG ATGGTGCTCAAGAACAAGCAAGTGACGTGGTTCGTGACATACCTGGTGACGTTCATCCTGCTTCACAACGCCTCT CTCATCACGGCCCACGACGCGGGATACGCCCGCAAGCATGGCATGAAGCGTCGGTTTGCACGCGAGGACAAGGTC CGAGAGTATCATCTTGGGGCAAACATCCTACTCGCTCATTTTCATTACTGCAACAAGGGCATGTACCCATTCTCG GACGAGTGCAAGGACAAGGACCTGCGGACTCTGGCGGATCTGGGTGATGAGGAGCTGCAATTTGTCCACGCGACG AGAGATTATGTCAAACGGCACCGACGGGCGTGGGAGCAGCTCCGGACAGACGGCGAGTACGAAGATGATTTCTTT TTCGTCAGCCAGCTGTTCGAGGAGAACTGGAAGCCGCAATCGACGATATAG |
| Transcript | >Hirsu2|3516 ATGTCTCAAGGAAACGGCTCGACCTGCCATCATGGTCACGAGGAGAAGATGGCCAAGCTGAGCGACTCCTTGGGC CAGCACACGGACGGCCAGGCGTCCATGCTCCCCTGCTGGTCCGAGCCGGCCATGTCGTCCTCGCTCGCGCTGGGG ATACCGCTGGCCAAGCAAATGACCAACCTCAGCTTGTTGCTGTGTCCCTGCTCCGGCTTGGGCTGGGGCCAGCCT GATGGCTATTGCCCTCTTCCCGAGGCATCGCCCGCTGTTTATGACCCACATCAGCCCTACGGCGCAGAGAAGCAG CCGTACATGCAGATGCCCATGCCATCACAGAATGGGCGGGGCGGGCTGCCGTTCGTGGAGCCGGAGCAGTACAGC CCCGTGCAAGGTGATCAAGGACCGAACGCCCTGTCTCTGACCACCTACTCGGACCAAGAGCACATGCAGTTGGCG TCTCCTCCCGACAGCGCCAAGGATGTCTTCTTCCCCCATGATCGATCTTCGCTCGCCCCTTACTCCGATGATTAT ATGACACAGGACCTTCACTCGCCGAACGGCATGGCGTTCACTCCCGGGTACATGCGGAACGATAGCCAGCCCCAC CTCAGTTCGGTCTCCGACTTCGGCGACTCGCTCGGTCCTCACTCCGCGTCGCTCCATGGCATCTCGGGATGCGCG GACGTCTCGCCCTTCGGCATGCTGGCCGTCGGCGGTGTAGCCGATCAAGCGCCCCTGGGAGTTTGGAACGACTCG TCCATCTCCCACCAGCCATCGAATTTCGATGTTCTCATGCCGGACCAGCGAGGCGGCAAGAGAGGTCCGTTCAAG GATCCAAAGCTGCGCGAGCAGACGGCGCAGACCAGGCGCACAGGGTCATGCATCAGGTGTCGGATGCAGCGTATA CGTTGTGAATCCGACCCGGAGAATCCCAGTGGGGTGTGTTTGACCTGCACAAACGTGGCCAACACCAAGGCGGGA CGCTTCCCGTGCCTCAGATACAAGATAACCGACATGAAGCTGTATAAGCCCGGCCAGGTCCCCGGATACGAGTGG ACTCGCCGGTGGACAAACAGTATCACGGACCCCATCCAGAAATGGGCATCTCCCGACGTCAAGATTATTCGCGTC TCGGCCGGCTATTCGATGAGATGTATAGAGCTGCAAGTCCGGAAGTTCATACCACAGGACGGCGACAAACTTGTC CGGACTTGGGATTTTCAAGGGACAAGGAGGTCGGTGGCAATCCCGCCCTACGCTTTGATCGATTTGGAGGAGACG AAATCGACGTACTCGGCGCACATCCAAGACATCATGACGGACACGATCCAGCACGTGCTGGAGCGCCCGGACGGT CTTCTCTGCGAGACTTACTTCCGCGCGGTGCAGCTGATGAGCAGCCCGTCGACGTCGGTGGACTCGGCCAAGCTT CTCCGTCTGACGCTGACGCTGTGGGTCTCGATCCGCCTCTCGACCACGTCGGGCTTCCTGGTGGGCGACGAGACG CTGGGGATGCCGAGAGACATCTTGGACGAGACGAACCCCAACGCGGGCAAGATCCCGATGCCTCCGGTCCTCGGG GCGCAGCTGGATCTCGTGCTCATCCACCACATCCAGACAAAACTCCGGAGGGAGATGCTGGAGGTCTTGCAGAAG ATGGTGCTCAAGAACAAGCAAGTGACGTGGTTCGTGACATACCTGGTGACGTTCATCCTGCTTCACAACGCCTCT CTCATCACGGCCCACGACGCGGGATACGCCCGCAAGCATGGCATGAAGCGTCGGTTTGCACGCGAGGACAAGGTC CGAGAGTATCATCTTGGGGCAAACATCCTACTCGCTCATTTTCATTACTGCAACAAGGGCATGTACCCATTCTCG GACGAGTGCAAGGACAAGGACCTGCGGACTCTGGCGGATCTGGGTGATGAGGAGCTGCAATTTGTCCACGCGACG AGAGATTATGTCAAACGGCACCGACGGGCGTGGGAGCAGCTCCGGACAGACGGCGAGTACGAAGATGATTTCTTT TTCGTCAGCCAGCTGTTCGAGGAGAACTGGAAGCCGCAATCGACGATATAG |
| Gene | >Hirsu2|3516 ATGTCTCAAGGAAACGGCTCGACCTGCCATCATGGTCACGAGGAGAAGATGGCCAAGCTGAGCGACTCCTTGGGC CAGCACACGGACGGCCAGGCGTCCATGCTCCCCTGCTGGTCCGAGCCGGCCATGTCGTCCTCGCTCGCGCTGGGG ATACCGCTGGCCAAGCAAATGACCAACCTCAGCTTGTTGCTGTGTCCCTGCTCCGGCTTGGGCTGGGGCCAGCCT GATGGTGAGCTCCCGTGGTCTCTCCTGGCGCCGCTCTGCCATCGAGACAGTACGTTGACCTGACGTGTTTCAACT TCCAAGGCTATTGCCCTCTTCCCGAGGCATCGCCCGCTGTTTATGACCCACATCAGCCCTACGGCGCAGAGAAGC AGCCGTACATGCAGATGCCCATGCCATCACAGAATGGGCGGGGCGGGCTGCCGTTCGTGGAGCCGGAGCAGTACA GCCCCGTGCAAGGTGATCAAGGACCGAACGCCCTGTCTCTGACCACCTACTCGGACCAAGAGCACATGCAGTTGG CGTCTCCTCCCGACAGCGCCAAGGATGTCTTCTTCCCCCATGATCGATCTTCGCTCGCCCCTTACTCCGATGATT ATATGACACAGGACCTTCACTCGCCGAACGGCATGGCGTTCACTCCCGGGTACATGCGGAACGATAGCCAGCCCC ACCTCAGTTCGGTCTCCGACTTCGGCGACTCGCTCGGTCCTCACTCCGCGTCGCTCCATGGCATCTCGGGATGCG CGGACGTCTCGCCCTTCGGCATGCTGGCCGTCGGCGGTGTAGCCGATCAAGCGCCCCTGGGAGTTTGGAACGACT CGTCCATCTCCCACCAGCCATCGAATTTCGATGTTCTCATGCCGGACCAGCGAGGCGGCAAGAGAGGTCCGTTCA AGGATCCAAAGCTGCGCGAGCAGACGGCGCAGACCAGGCGCACAGGGTCATGCATCAGGTGTCGGATGCAGCGTA TACGTGTGAGCATTCCCAGCCTGGCCCCGGATGGCGGATGAAGAGCCTCGCACGGCTAACACTAGNNCCCCCCCC CCCCCCCCCCGCTTAAGTGTGAATCCGACCCGGAGAATCCCAGTGGGGTGTGTTTGACCTGCACAAACGTGGCCA ACACCAAGGCGGGACGCTTCCCGTGCCTCAGATACAAGATAACCGACATGAAGCTGTATAAGCCCGGCCAGGTCC CCGGATACGAGTGGACTCGCCGGTGGACAAACAGTATCACGGACCCCATCCAGAAATGGGCATCTCCCGACGTCA AGATTATTCGCGTCTCGGCCGGCTATTCGATGAGATGTATAGAGCTGCAAGTCCGGAAGTTCATACCACAGGACG GCGACAAACTTGTCCGGACTTGGGATTTTCAAGGGACAAGGAGGTCGGTGGCAATCCCGCCCTACGCTTTGATCG ATTTGGAGGAGACGAAATCGACGTACTCGGCGCACATCCAAGACATCATGACGGACACGATCCAGCACGTGCTGG AGCGCCCGGACGGTCTTCTCTGCGAGACTTACTTCCGCGCGGTGCAGCTGATGAGCAGCCCGTCGACGTCGGTGG ACTCGGCCAAGCTTCTCCGTCTGACGCTGACGCTGTGGGTCTCGATCCGCCTCTCGACCACGTCGGGCTTCCTGG TGGGCGACGAGACGCTGGGGATGCCGAGAGACATCTTGGACGAGACGAACCCCAACGCGGGCAAGATCCCGATGC CTCCGGTCCTCGGGGCGCAGCTGGATCTCGTGCTCATCCACCACATCCAGACAAAACTCCGGAGGGAGATGCTGG AGGTCTTGCAGAAGATGGTGCTCAAGAACAAGCAAGTGACGTGGTTCGTGACATACCTGGTGACGTTCATCCTGC TTCACAACGCCTCTCTCATCACGGCCCACGACGCGGGATACGCCCGCAAGCATGGCATGAAGGTGAGTTGGACGA CCCAGGTGATCGGGTGCCGTAGGTGGCGCAGGCAGGAGGGCCCCCTGGCTTTTTAATGAGGCAGCGTGGCTTCCG TCCGCACGCGCCTCAGTTACCCTCGAATTGCTTCCCTTTCCCTGCCGCGGTTTCCTTTTTCCTGCCGGCGCCCTC GTCCCTCGCTCTTCCGCTAACGACGGGTCATGCAGCGTCGGTTTGCACGCGAGGACAAGGTCCGAGAGTATCATC TTGGTGAGACAAGGGCCCCTTTCGCTTCCGCATGAGACAGGGCGTGCTAACAAAGGGCGGCGTGGCCAGGGGCAA ACATCCTACTCGCTCATTTTCATTACTGCAACAAGGGCATGTACCCATTCTCGGACGAGTGCAAGGACAAGGACC TGCGGACTCTGGCGGATCTGGGTGATGAGGAGCTGCAATTTGTCCACGCGACGAGAGATTATGTCAAACGGCACC GTAAGTCGCTGTCCAGACCCGGATTCCCGGGCCAACGCTAATGTAGGGGTGGCGCAATGCAGGACGGGCGTGGGA GCAGCTCCGGACAGACGGCGAGTACGAAGATGATTTCTTTTTCGTCAGCCAGCTGTTCGAGGAGAACTGGAAGCC GCAATCGACGATATAG |