Protein ID | Hirsu2|3513 |
Gene name | |
Location | Contig_1921:2428..3376 |
Strand | + |
Gene length (bp) | 948 |
Transcript length (bp) | 879 |
Coding sequence length (bp) | 879 |
Protein length (aa) | 293 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00651 | BTB | BTB/POZ domain | 3.4E-04 | 20 | 61 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.6728 | 0.5241 | 0.1265 | 0.0409 | 0.1156 | 0.0107 | 0.0807 | 0.1388 | 0.139 | 0.0022 |
Orthofinder run ID | 4 |
Orthogroup | 6105 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3513 MYSDGDELPSLPNRKEMEQLAAKPVSDLTIVCGTSKWFAHKAVVCPQSAFFAVACNGPFKVSSHRTDVPLDEQQT RPSTYWIFKPVADVDQTLSPQQEGRSGVVDLADDEPQAVRLMMCYFYQADYPRVRAAREPSRLRSLWHFVHGSLV DDTGGDDDSNLAVHAQVYALAEKYAVDGLKRLARYKFQLEAAGHWRSRDFARAAEMVFTSTVDADRGLRDIVVDA FDDHRSLLHLGPSKAALRRVPGLAYDVLMGLHDPTAGWDASRMARARKADGREDDDDDDDEEDHGPA* |
Coding | >Hirsu2|3513 ATGTACAGCGACGGCGACGAGCTGCCGTCCCTGCCGAACAGAAAGGAGATGGAGCAGCTCGCCGCCAAGCCCGTC TCGGACCTGACCATCGTCTGCGGCACGAGCAAGTGGTTCGCCCACAAGGCCGTCGTCTGCCCGCAGTCGGCCTTC TTCGCCGTCGCGTGCAACGGCCCGTTCAAGGTCAGCAGCCATCGGACAGACGTGCCGCTGGATGAGCAGCAGACA CGTCCATCAACGTACTGGATTTTCAAACCCGTGGCTGACGTGGACCAAACGCTTTCACCGCAACAGGAGGGCCGG TCAGGCGTCGTCGACCTGGCCGACGACGAGCCGCAGGCGGTCCGGCTGATGATGTGTTATTTCTATCAGGCGGAC TACCCGCGCGTGCGGGCCGCGCGCGAGCCGTCGAGGCTGCGGTCGCTGTGGCACTTCGTCCACGGCTCGCTCGTC GACGACACGGGCGGCGATGACGACTCCAACCTGGCCGTCCACGCCCAGGTGTACGCGCTGGCGGAGAAGTACGCC GTCGACGGCCTGAAGCGGCTGGCGCGCTACAAGTTCCAGCTCGAGGCGGCCGGCCACTGGCGCTCGCGCGACTTC GCCCGCGCCGCCGAGATGGTCTTCACGTCCACCGTCGACGCCGACCGCGGCCTGCGCGACATCGTCGTCGACGCC TTCGACGACCACCGCAGCCTGCTGCACCTGGGCCCCTCCAAGGCCGCCCTGCGCCGCGTCCCGGGCCTGGCCTAC GACGTCCTCATGGGCCTGCACGACCCGACGGCCGGATGGGACGCCAGCCGCATGGCGCGCGCGAGGAAGGCGGAT GGGCGTGAGGACGACGACGACGACGACGACGAGGAGGACCATGGTCCGGCCTGA |
Transcript | >Hirsu2|3513 ATGTACAGCGACGGCGACGAGCTGCCGTCCCTGCCGAACAGAAAGGAGATGGAGCAGCTCGCCGCCAAGCCCGTC TCGGACCTGACCATCGTCTGCGGCACGAGCAAGTGGTTCGCCCACAAGGCCGTCGTCTGCCCGCAGTCGGCCTTC TTCGCCGTCGCGTGCAACGGCCCGTTCAAGGTCAGCAGCCATCGGACAGACGTGCCGCTGGATGAGCAGCAGACA CGTCCATCAACGTACTGGATTTTCAAACCCGTGGCTGACGTGGACCAAACGCTTTCACCGCAACAGGAGGGCCGG TCAGGCGTCGTCGACCTGGCCGACGACGAGCCGCAGGCGGTCCGGCTGATGATGTGTTATTTCTATCAGGCGGAC TACCCGCGCGTGCGGGCCGCGCGCGAGCCGTCGAGGCTGCGGTCGCTGTGGCACTTCGTCCACGGCTCGCTCGTC GACGACACGGGCGGCGATGACGACTCCAACCTGGCCGTCCACGCCCAGGTGTACGCGCTGGCGGAGAAGTACGCC GTCGACGGCCTGAAGCGGCTGGCGCGCTACAAGTTCCAGCTCGAGGCGGCCGGCCACTGGCGCTCGCGCGACTTC GCCCGCGCCGCCGAGATGGTCTTCACGTCCACCGTCGACGCCGACCGCGGCCTGCGCGACATCGTCGTCGACGCC TTCGACGACCACCGCAGCCTGCTGCACCTGGGCCCCTCCAAGGCCGCCCTGCGCCGCGTCCCGGGCCTGGCCTAC GACGTCCTCATGGGCCTGCACGACCCGACGGCCGGATGGGACGCCAGCCGCATGGCGCGCGCGAGGAAGGCGGAT GGGCGTGAGGACGACGACGACGACGACGACGAGGAGGACCATGGTCCGGCCTGA |
Gene | >Hirsu2|3513 ATGTACAGCGACGGCGACGAGCTGCCGTCCCTGCCGAACAGAAAGGAGATGGAGTAAGCTCGCAGGCGGACAGAG TCAAGCCAAAGCATGCCGATGGCCGGCCGCTGATCCTCCGAGTCCAGGCAGCTCGCCGCCAAGCCCGTCTCGGAC CTGACCATCGTCTGCGGCACGAGCAAGTGGTTCGCCCACAAGGCCGTCGTCTGCCCGCAGTCGGCCTTCTTCGCC GTCGCGTGCAACGGCCCGTTCAAGGTCAGCAGCCATCGGACAGACGTGCCGCTGGATGAGCAGCAGACACGTCCA TCAACGTACTGGATTTTCAAACCCGTGGCTGACGTGGACCAAACGCTTTCACCGCAACAGGAGGGCCGGTCAGGC GTCGTCGACCTGGCCGACGACGAGCCGCAGGCGGTCCGGCTGATGATGTGTTATTTCTATCAGGCGGACTACCCG CGCGTGCGGGCCGCGCGCGAGCCGTCGAGGCTGCGGTCGCTGTGGCACTTCGTCCACGGCTCGCTCGTCGACGAC ACGGGCGGCGATGACGACTCCAACCTGGCCGTCCACGCCCAGGTGTACGCGCTGGCGGAGAAGTACGCCGTCGAC GGCCTGAAGCGGCTGGCGCGCTACAAGTTCCAGCTCGAGGCGGCCGGCCACTGGCGCTCGCGCGACTTCGCCCGC GCCGCCGAGATGGTCTTCACGTCCACCGTCGACGCCGACCGCGGCCTGCGCGACATCGTCGTCGACGCCTTCGAC GACCACCGCAGCCTGCTGCACCTGGGCCCCTCCAAGGCCGCCCTGCGCCGCGTCCCGGGCCTGGCCTACGACGTC CTCATGGGCCTGCACGACCCGACGGCCGGATGGGACGCCAGCCGCATGGCGCGCGCGAGGAAGGCGGATGGGCGT GAGGACGACGACGACGACGACGACGAGGAGGACCATGGTCCGGCCTGA |