Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3512
Gene name
LocationContig_1921:171..1139
Strand-
Gene length (bp)968
Transcript length (bp)657
Coding sequence length (bp)657
Protein length (aa) 219

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 9.0E-21 45 210

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 1 210 2.0E-49
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 3 212 7.0E-48
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 24 204 8.0E-40
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 3 208 8.0E-32
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 5 208 4.0E-31
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Swissprot ID Swissprot Description Start End E-value
sp|O74923|YJ7D_SCHPO Uncharacterized transporter C757.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.13 PE=3 SV=1 1 210 2.0E-49
sp|B5BP49|YP55_SCHPO Uncharacterized transporter C460.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC460.05 PE=3 SV=1 3 212 7.0E-48
sp|O94491|YC7A_SCHPO Uncharacterized transporter C417.10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC417.10 PE=3 SV=1 24 204 8.0E-40
sp|O94572|YGDF_SCHPO Uncharacterized transporter C1773.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.15 PE=3 SV=1 3 208 8.0E-32
sp|P15365|DAL5_YEAST Allantoate permease OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL5 PE=1 SV=1 5 208 4.0E-31
sp|Q07904|THI73_YEAST Thiamine pathway transporter THI73 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI73 PE=1 SV=1 3 210 8.0E-28
sp|Q9C0V8|YHJ1_SCHPO Uncharacterized transporter PB10D8.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB10D8.01 PE=3 SV=1 12 207 8.0E-27
sp|Q9US37|YFZ4_SCHPO Uncharacterized transporter C1039.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1039.04 PE=3 SV=1 15 207 6.0E-25
sp|Q9P6J0|YHDC_SCHPO Uncharacterized transporter C1683.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1683.12 PE=3 SV=1 24 204 3.0E-23
sp|Q9US44|YIZG_SCHPO Uncharacterized transporter C1002.16c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1002.16c PE=3 SV=1 24 204 5.0E-23
sp|P53322|TNA1_YEAST High-affinity nicotinic acid transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TNA1 PE=1 SV=1 11 210 6.0E-22
sp|Q12235|YCT1_YEAST High affinity cysteine transporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCT1 PE=1 SV=1 15 207 1.0E-20
sp|Q9C0U9|YQD3_SCHPO Uncharacterized transporter PB1C11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCPB1C11.03 PE=1 SV=1 24 207 7.0E-20
sp|Q10097|YAOI_SCHPO Uncharacterized transporter C11D3.18C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC11D3.18c PE=3 SV=1 3 204 2.0E-19
sp|Q44470|TUB4_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 24 202 2.0E-17
sp|P70786|TUB3_AGRVI Putative tartrate transporter OS=Agrobacterium vitis GN=ttuB PE=2 SV=1 23 157 1.0E-15
sp|O43000|LIZ1_SCHPO Pantothenate transporter liz1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=liz1 PE=2 SV=2 29 208 2.0E-15
sp|Q88FY6|NICT_PSEPK Putative metabolite transport protein NicT OS=Pseudomonas putida (strain KT2440) GN=nicT PE=2 SV=1 19 202 5.0E-14
sp|P25621|FEN2_YEAST Pantothenate transporter FEN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FEN2 PE=1 SV=1 26 212 2.0E-13
sp|P40445|YIQ6_YEAST Uncharacterized transporter YIL166C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YIL166C PE=1 SV=1 25 204 2.0E-11
sp|P39709|SEO1_YEAST Probable transporter SEO1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEO1 PE=1 SV=1 28 202 1.0E-10
sp|P76470|RHMT_ECOLI Inner membrane transport protein RhmT OS=Escherichia coli (strain K12) GN=rhmT PE=1 SV=2 32 193 3.0E-09
sp|P39398|LGOT_ECOLI Probable L-galactonate transporter OS=Escherichia coli (strain K12) GN=lgoT PE=1 SV=2 11 178 1.0E-08
sp|Q05181|PHT1_PSEPU Phthalate transporter OS=Pseudomonas putida GN=pht1 PE=3 SV=1 14 162 8.0E-07
sp|O13880|VHT1_SCHPO Vitamin H transporter 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vht1 PE=2 SV=1 7 170 1.0E-06
sp|Q7XJR2|ANTR3_ARATH Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2 62 188 8.0E-06
sp|P42205|GUDP_PSEPU Probable glucarate transporter OS=Pseudomonas putida GN=gudP PE=3 SV=1 35 162 8.0E-06
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GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0055085 transmembrane transport Yes
GO:0031224 intrinsic component of membrane No
GO:0008150 biological_process No
GO:0006810 transport No
GO:0051179 localization No
GO:0051234 establishment of localization No
GO:0044425 membrane part No
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.5

Transmembrane Domains

Domain # Start End Length
1 40 62 22
2 77 99 22
3 112 134 22
4 138 157 19
5 169 188 19
6 192 214 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3512
MGEKDGFRDAAEPADDAAPPAELLSAEEDRRILRRIDLCLLPVMAVSYMFQYLDKSALGFTAIMGLRRDLGLSGS
DFSWASGVYYFGYLLASYPAGLIMVRWRVGKTIAASVVLWGAVLMLTAVTTNAASLLAVRFFLGVAESPIAPGLT
VVVAMWYKRAEQPLRHAGWFLGNTTAGIVGGLMAYGIGHIQGFTTWKAVFLIFGGATVAWRWRASATT*
Coding >Hirsu2|3512
ATGGGCGAAAAGGACGGCTTCCGCGACGCGGCCGAGCCCGCCGACGACGCCGCCCCGCCGGCCGAGCTGCTGAGC
GCCGAAGAGGACCGCCGGATCCTGCGCCGGATCGACCTGTGCCTGCTGCCCGTCATGGCCGTCTCGTACATGTTC
CAGTACCTCGACAAGTCGGCCCTGGGCTTCACGGCCATCATGGGCCTGCGCCGCGACCTGGGCCTGAGCGGCTCC
GACTTCTCGTGGGCCAGCGGCGTCTACTACTTCGGCTACCTGCTGGCCTCGTACCCGGCCGGCCTCATCATGGTC
CGCTGGCGCGTCGGCAAGACCATTGCCGCCTCCGTCGTCCTCTGGGGCGCCGTCCTGATGCTGACGGCCGTCACC
ACCAACGCCGCCTCCCTGCTGGCCGTGCGCTTCTTCCTCGGCGTCGCCGAGTCGCCCATCGCGCCGGGCCTGACC
GTCGTCGTCGCCATGTGGTACAAGCGCGCCGAGCAGCCGCTGCGGCACGCCGGCTGGTTCCTCGGCAACACGACG
GCCGGCATCGTCGGCGGCCTCATGGCCTACGGCATCGGCCACATCCAAGGCTTCACCACCTGGAAGGCCGTCTTC
CTCATCTTCGGCGGCGCCACGGTCGCCTGGCGGTGGCGCGCGTCAGCGACAACATGA
Transcript >Hirsu2|3512
ATGGGCGAAAAGGACGGCTTCCGCGACGCGGCCGAGCCCGCCGACGACGCCGCCCCGCCGGCCGAGCTGCTGAGC
GCCGAAGAGGACCGCCGGATCCTGCGCCGGATCGACCTGTGCCTGCTGCCCGTCATGGCCGTCTCGTACATGTTC
CAGTACCTCGACAAGTCGGCCCTGGGCTTCACGGCCATCATGGGCCTGCGCCGCGACCTGGGCCTGAGCGGCTCC
GACTTCTCGTGGGCCAGCGGCGTCTACTACTTCGGCTACCTGCTGGCCTCGTACCCGGCCGGCCTCATCATGGTC
CGCTGGCGCGTCGGCAAGACCATTGCCGCCTCCGTCGTCCTCTGGGGCGCCGTCCTGATGCTGACGGCCGTCACC
ACCAACGCCGCCTCCCTGCTGGCCGTGCGCTTCTTCCTCGGCGTCGCCGAGTCGCCCATCGCGCCGGGCCTGACC
GTCGTCGTCGCCATGTGGTACAAGCGCGCCGAGCAGCCGCTGCGGCACGCCGGCTGGTTCCTCGGCAACACGACG
GCCGGCATCGTCGGCGGCCTCATGGCCTACGGCATCGGCCACATCCAAGGCTTCACCACCTGGAAGGCCGTCTTC
CTCATCTTCGGCGGCGCCACGGTCGCCTGGCGGTGGCGCGCGTCAGCGACAACATGA
Gene >Hirsu2|3512
ATGGGCGAAAAGGACGGCTTCCGCGACGCGGCCGAGCCCGCCGACGACGCCGCCCCGCCGGCCGAGCTGCTGAGC
GCCGAAGAGGACCGCCGGATCCTGCGCCGGATCGACCTGTGGTGAGCGGCTCCAGGGGAGGAGAGAGAAATCAAA
CAAGAAAAGAAAAAAAAAGGCTGAAGTCGGTGCTCCCAGCCTGCTGCCCGTCATGGCCGTCTCGTACATGTTCCA
GTACCTCGACAAGTCGGCCCTGGGCTTCACGGCCATCATGGGCCTGCGCCGCGACCTGGGCCTGAGCGGCTCCGA
CTTCTCGTGGGCCAGCGGCGTCTACTACTTCGGCTACCTGCTGGCCTCGTACCCGGCCGGCCTCATCATGGTCCG
CTGGCGCGTCGGCAAGACCATTGCCGCCTCCGTGTCCGTCTTCTTCCTCTTCTCCTCCTCCTCCTCCCTCCTCCG
AGCACGGCCGTCGCCTGACCTCCTTGGCCAGCGTCCTCTGGGGCGCCGTCCTGATGCTGACGGCCGTCACCACCA
ACGCCGCCTCCCTGCTGGCCGTGCGCTTCTTCCTCGGCGTCGCCGAGTCGCCCATCGCGCCGGGCCTGACCGTCG
TCGTCGCCATGTGGTACAAGCGCGCCGAGCAGCCGCTGCGGCACGCCGGCTGGTTCCTCGGCAACACGACGGCCG
GCATCGTCGGCGGCCTCATGGCCTACGGCATCGGCCACATCCAAGGCTTCACCACCTGGAAGGTCCGCCGAGCCT
CTCCCTCTTCCCCTTCCTCCTCCCCGAAACTTGTCTCTCTCGCGACTGACGACGGTCTCGTTCGGCCACCCGCCA
GGCCGTCTTCCTCATCTTCGGCGGCGCCACGGTCGCCTGGTCGGTCGGCATCTTCTGGCTGCTGCCCGACGTGCC
CATGTCGGCCTGGTTCCTGAGCGAGCCCGACCGGGCCAAGGCGGTGGCGCGCGTCAGCGACAACATGA

© 2020 - Robin Ohm - Utrecht University - The Netherlands

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