© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3511 |
| Gene name | |
| Location | Contig_1920:1729..4078 |
| Strand | - |
| Gene length (bp) | 2349 |
| Transcript length (bp) | 2349 |
| Coding sequence length (bp) | 2349 |
| Protein length (aa) | 783 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.1374 | 0.2275 | 0.1372 | 0.0731 | 0.8782 | 0.0481 | 0.0391 | 0.039 | 0.0911 | 0.0194 |
| Orthofinder run ID | 4 |
| Orthogroup | 5140 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3511 MQKTLWPNRRCSPSAGITTAFSRFNSLSRTNFADEIALAAPSFTTANVLKPASPPHSFSLDRAEFQWRPPKNNNQ VNYAPTWKIAGSPGPARDQHTMALSNSKGLVSLRDDAVEEAIKHLHTPDTEFQSHADAIESWQRFSVPRRSPFGS DDTWKLCQSIRGRNLLSLLEAETFRNEVLAAAFKCRTRVATVAKLARQLHREHGFLWPNLYAKAIHHCLRHGRFT QAALWHEHLAPTFLPQTEALGALISCFVIDPSPQMQSNLVALYVSSMEHRLYDHIIPALFSSGNSKLARTWRRKL VAFKDFPTTSKSRPFLVFMASYYPSIRLTREEICIADLQRQAQLDSSICTASHASSFRYSVRRTRLFHGVNWALG SGLLSKRLNALLKKHLLQHKMHKVGLVLDRMGALRLGVAHGNAAKLLQRTFARISEHPMEWSRVTGLPFTNTLGR LHRAIQITRRLARHDVAIPLRYWKLILLNLGRLRRFAEMEQVCMEVVQIYARPPGGLIPVHRQNWPKIVSAETAK KKVVSGEARYEGGETDTASARTKRGGATLLHSEDEPQARCVQQRLSLPAKPDEGMPGHDTERTPCAINVNHPSSG LMCSIKDRGGLASHDAASQPEMECLIPSDLPFTHREHPIQKLFDPHLQRSIVRWGFDHALAAQPSDVALMDLPFA AIQQSDVACGVRLLAALRNHGVLIDPQIVRAALISRIATAQVPGRRRHRSRDEIEMTVENLKKTIDMAWGSEILP DVSNMLRGLEKNMSKLRKRYSKLIGRALGQDT* |
| Coding | >Hirsu2|3511 ATGCAGAAGACATTGTGGCCAAATCGACGTTGCTCTCCCTCCGCTGGAATCACCACGGCCTTCTCCAGGTTCAAT TCATTGTCGAGGACGAATTTTGCAGACGAAATCGCTTTAGCAGCACCTTCTTTCACCACGGCAAACGTGCTCAAA CCAGCGTCTCCGCCTCATTCATTCTCTCTCGACCGAGCGGAGTTCCAATGGAGACCACCGAAGAACAACAACCAG GTGAACTACGCTCCGACATGGAAAATTGCTGGCAGCCCTGGGCCGGCTCGAGACCAGCATACTATGGCGTTGAGC AATTCCAAAGGGTTGGTCAGTCTCCGCGATGATGCTGTTGAAGAGGCAATAAAGCACCTACATACACCTGATACA GAGTTTCAATCGCACGCAGACGCCATAGAAAGCTGGCAACGGTTTTCTGTCCCTCGGCGCTCGCCTTTCGGTTCT GACGACACTTGGAAACTTTGTCAATCAATTCGCGGAAGGAATCTTTTGTCCTTGCTGGAGGCGGAGACGTTCCGC AATGAAGTACTAGCAGCTGCGTTCAAGTGTCGCACGCGCGTCGCCACTGTCGCCAAATTGGCTCGCCAATTACAT CGTGAACACGGCTTCCTGTGGCCTAACCTATATGCCAAGGCCATACACCATTGTCTTCGTCATGGTAGGTTCACG CAAGCCGCACTCTGGCATGAGCATCTAGCTCCGACCTTTTTACCTCAGACAGAAGCGTTGGGCGCCTTGATCTCC TGCTTTGTCATCGACCCTTCGCCTCAAATGCAGAGCAACTTGGTCGCCTTATACGTTTCAAGTATGGAACACAGA CTGTATGACCACATCATTCCAGCACTTTTCTCGTCCGGAAACTCGAAGTTGGCGCGCACGTGGCGAAGGAAACTC GTCGCATTCAAAGACTTTCCCACGACCTCGAAGTCGCGACCGTTTCTGGTATTCATGGCCAGCTACTATCCATCT ATCAGGCTAACTCGTGAGGAGATCTGTATTGCAGATCTTCAGAGGCAAGCTCAACTCGATTCGTCAATATGTACC GCTTCTCATGCGTCATCATTTCGCTACAGTGTGAGGAGAACAAGGCTGTTTCATGGTGTCAACTGGGCGCTTGGG TCCGGATTATTGTCGAAGCGTCTCAACGCACTGCTCAAGAAGCATCTTCTTCAGCATAAGATGCACAAAGTCGGG CTTGTACTCGATCGAATGGGGGCGCTCAGGCTTGGCGTTGCCCATGGAAATGCTGCGAAACTCCTCCAACGTACG TTTGCTCGTATCAGCGAGCATCCGATGGAGTGGAGCCGCGTAACCGGATTGCCCTTCACCAATACCTTAGGCCGT TTGCACAGAGCGATACAGATCACCCGCCGCCTTGCTCGTCATGATGTTGCAATACCACTCCGTTACTGGAAGCTC ATCCTATTAAACCTAGGCCGGCTCCGGCGCTTTGCCGAGATGGAGCAAGTCTGCATGGAGGTCGTCCAAATCTAC GCGCGTCCACCCGGGGGCTTAATACCCGTTCATCGACAGAACTGGCCTAAAATTGTTTCCGCCGAGACAGCTAAG AAAAAGGTCGTATCAGGTGAGGCGCGGTATGAAGGGGGAGAGACCGACACGGCCTCGGCTCGGACAAAAAGAGGA GGGGCTACCCTCTTGCATAGTGAAGACGAGCCCCAGGCGAGATGCGTGCAGCAACGATTAAGTCTGCCCGCAAAA CCCGACGAGGGGATGCCAGGTCATGATACTGAGAGAACTCCCTGTGCAATCAACGTCAACCATCCGAGCTCAGGC TTGATGTGCAGCATTAAAGACCGAGGGGGACTTGCGAGTCATGATGCAGCAAGCCAACCTGAAATGGAATGTTTA ATTCCAAGTGACCTTCCTTTCACCCACAGAGAGCACCCTATACAAAAGTTATTTGATCCTCACTTACAGCGCTCC ATTGTGAGATGGGGGTTCGATCATGCGCTAGCCGCTCAACCGAGTGACGTAGCACTTATGGATCTTCCATTCGCC GCTATCCAGCAATCTGATGTTGCTTGCGGTGTACGATTGTTGGCCGCTCTTCGAAATCATGGCGTTCTCATCGAC CCTCAGATAGTACGCGCCGCATTGATCTCACGCATTGCCACGGCTCAGGTGCCTGGTCGGCGACGACACCGCTCC AGAGATGAAATCGAAATGACGGTGGAGAATTTGAAGAAGACGATAGACATGGCTTGGGGTTCGGAGATCCTCCCC GATGTGTCAAATATGCTGCGTGGCCTAGAGAAAAATATGTCAAAACTACGAAAACGTTACTCGAAGCTAATAGGG AGAGCACTCGGCCAAGACACGTGA |
| Transcript | >Hirsu2|3511 ATGCAGAAGACATTGTGGCCAAATCGACGTTGCTCTCCCTCCGCTGGAATCACCACGGCCTTCTCCAGGTTCAAT TCATTGTCGAGGACGAATTTTGCAGACGAAATCGCTTTAGCAGCACCTTCTTTCACCACGGCAAACGTGCTCAAA CCAGCGTCTCCGCCTCATTCATTCTCTCTCGACCGAGCGGAGTTCCAATGGAGACCACCGAAGAACAACAACCAG GTGAACTACGCTCCGACATGGAAAATTGCTGGCAGCCCTGGGCCGGCTCGAGACCAGCATACTATGGCGTTGAGC AATTCCAAAGGGTTGGTCAGTCTCCGCGATGATGCTGTTGAAGAGGCAATAAAGCACCTACATACACCTGATACA GAGTTTCAATCGCACGCAGACGCCATAGAAAGCTGGCAACGGTTTTCTGTCCCTCGGCGCTCGCCTTTCGGTTCT GACGACACTTGGAAACTTTGTCAATCAATTCGCGGAAGGAATCTTTTGTCCTTGCTGGAGGCGGAGACGTTCCGC AATGAAGTACTAGCAGCTGCGTTCAAGTGTCGCACGCGCGTCGCCACTGTCGCCAAATTGGCTCGCCAATTACAT CGTGAACACGGCTTCCTGTGGCCTAACCTATATGCCAAGGCCATACACCATTGTCTTCGTCATGGTAGGTTCACG CAAGCCGCACTCTGGCATGAGCATCTAGCTCCGACCTTTTTACCTCAGACAGAAGCGTTGGGCGCCTTGATCTCC TGCTTTGTCATCGACCCTTCGCCTCAAATGCAGAGCAACTTGGTCGCCTTATACGTTTCAAGTATGGAACACAGA CTGTATGACCACATCATTCCAGCACTTTTCTCGTCCGGAAACTCGAAGTTGGCGCGCACGTGGCGAAGGAAACTC GTCGCATTCAAAGACTTTCCCACGACCTCGAAGTCGCGACCGTTTCTGGTATTCATGGCCAGCTACTATCCATCT ATCAGGCTAACTCGTGAGGAGATCTGTATTGCAGATCTTCAGAGGCAAGCTCAACTCGATTCGTCAATATGTACC GCTTCTCATGCGTCATCATTTCGCTACAGTGTGAGGAGAACAAGGCTGTTTCATGGTGTCAACTGGGCGCTTGGG TCCGGATTATTGTCGAAGCGTCTCAACGCACTGCTCAAGAAGCATCTTCTTCAGCATAAGATGCACAAAGTCGGG CTTGTACTCGATCGAATGGGGGCGCTCAGGCTTGGCGTTGCCCATGGAAATGCTGCGAAACTCCTCCAACGTACG TTTGCTCGTATCAGCGAGCATCCGATGGAGTGGAGCCGCGTAACCGGATTGCCCTTCACCAATACCTTAGGCCGT TTGCACAGAGCGATACAGATCACCCGCCGCCTTGCTCGTCATGATGTTGCAATACCACTCCGTTACTGGAAGCTC ATCCTATTAAACCTAGGCCGGCTCCGGCGCTTTGCCGAGATGGAGCAAGTCTGCATGGAGGTCGTCCAAATCTAC GCGCGTCCACCCGGGGGCTTAATACCCGTTCATCGACAGAACTGGCCTAAAATTGTTTCCGCCGAGACAGCTAAG AAAAAGGTCGTATCAGGTGAGGCGCGGTATGAAGGGGGAGAGACCGACACGGCCTCGGCTCGGACAAAAAGAGGA GGGGCTACCCTCTTGCATAGTGAAGACGAGCCCCAGGCGAGATGCGTGCAGCAACGATTAAGTCTGCCCGCAAAA CCCGACGAGGGGATGCCAGGTCATGATACTGAGAGAACTCCCTGTGCAATCAACGTCAACCATCCGAGCTCAGGC TTGATGTGCAGCATTAAAGACCGAGGGGGACTTGCGAGTCATGATGCAGCAAGCCAACCTGAAATGGAATGTTTA ATTCCAAGTGACCTTCCTTTCACCCACAGAGAGCACCCTATACAAAAGTTATTTGATCCTCACTTACAGCGCTCC ATTGTGAGATGGGGGTTCGATCATGCGCTAGCCGCTCAACCGAGTGACGTAGCACTTATGGATCTTCCATTCGCC GCTATCCAGCAATCTGATGTTGCTTGCGGTGTACGATTGTTGGCCGCTCTTCGAAATCATGGCGTTCTCATCGAC CCTCAGATAGTACGCGCCGCATTGATCTCACGCATTGCCACGGCTCAGGTGCCTGGTCGGCGACGACACCGCTCC AGAGATGAAATCGAAATGACGGTGGAGAATTTGAAGAAGACGATAGACATGGCTTGGGGTTCGGAGATCCTCCCC GATGTGTCAAATATGCTGCGTGGCCTAGAGAAAAATATGTCAAAACTACGAAAACGTTACTCGAAGCTAATAGGG AGAGCACTCGGCCAAGACACGTGA |
| Gene | >Hirsu2|3511 ATGCAGAAGACATTGTGGCCAAATCGACGTTGCTCTCCCTCCGCTGGAATCACCACGGCCTTCTCCAGGTTCAAT TCATTGTCGAGGACGAATTTTGCAGACGAAATCGCTTTAGCAGCACCTTCTTTCACCACGGCAAACGTGCTCAAA CCAGCGTCTCCGCCTCATTCATTCTCTCTCGACCGAGCGGAGTTCCAATGGAGACCACCGAAGAACAACAACCAG GTGAACTACGCTCCGACATGGAAAATTGCTGGCAGCCCTGGGCCGGCTCGAGACCAGCATACTATGGCGTTGAGC AATTCCAAAGGGTTGGTCAGTCTCCGCGATGATGCTGTTGAAGAGGCAATAAAGCACCTACATACACCTGATACA GAGTTTCAATCGCACGCAGACGCCATAGAAAGCTGGCAACGGTTTTCTGTCCCTCGGCGCTCGCCTTTCGGTTCT GACGACACTTGGAAACTTTGTCAATCAATTCGCGGAAGGAATCTTTTGTCCTTGCTGGAGGCGGAGACGTTCCGC AATGAAGTACTAGCAGCTGCGTTCAAGTGTCGCACGCGCGTCGCCACTGTCGCCAAATTGGCTCGCCAATTACAT CGTGAACACGGCTTCCTGTGGCCTAACCTATATGCCAAGGCCATACACCATTGTCTTCGTCATGGTAGGTTCACG CAAGCCGCACTCTGGCATGAGCATCTAGCTCCGACCTTTTTACCTCAGACAGAAGCGTTGGGCGCCTTGATCTCC TGCTTTGTCATCGACCCTTCGCCTCAAATGCAGAGCAACTTGGTCGCCTTATACGTTTCAAGTATGGAACACAGA CTGTATGACCACATCATTCCAGCACTTTTCTCGTCCGGAAACTCGAAGTTGGCGCGCACGTGGCGAAGGAAACTC GTCGCATTCAAAGACTTTCCCACGACCTCGAAGTCGCGACCGTTTCTGGTATTCATGGCCAGCTACTATCCATCT ATCAGGCTAACTCGTGAGGAGATCTGTATTGCAGATCTTCAGAGGCAAGCTCAACTCGATTCGTCAATATGTACC GCTTCTCATGCGTCATCATTTCGCTACAGTGTGAGGAGAACAAGGCTGTTTCATGGTGTCAACTGGGCGCTTGGG TCCGGATTATTGTCGAAGCGTCTCAACGCACTGCTCAAGAAGCATCTTCTTCAGCATAAGATGCACAAAGTCGGG CTTGTACTCGATCGAATGGGGGCGCTCAGGCTTGGCGTTGCCCATGGAAATGCTGCGAAACTCCTCCAACGTACG TTTGCTCGTATCAGCGAGCATCCGATGGAGTGGAGCCGCGTAACCGGATTGCCCTTCACCAATACCTTAGGCCGT TTGCACAGAGCGATACAGATCACCCGCCGCCTTGCTCGTCATGATGTTGCAATACCACTCCGTTACTGGAAGCTC ATCCTATTAAACCTAGGCCGGCTCCGGCGCTTTGCCGAGATGGAGCAAGTCTGCATGGAGGTCGTCCAAATCTAC GCGCGTCCACCCGGGGGCTTAATACCCGTTCATCGACAGAACTGGCCTAAAATTGTTTCCGCCGAGACAGCTAAG AAAAAGGTCGTATCAGGTGAGGCGCGGTATGAAGGGGGAGAGACCGACACGGCCTCGGCTCGGACAAAAAGAGGA GGGGCTACCCTCTTGCATAGTGAAGACGAGCCCCAGGCGAGATGCGTGCAGCAACGATTAAGTCTGCCCGCAAAA CCCGACGAGGGGATGCCAGGTCATGATACTGAGAGAACTCCCTGTGCAATCAACGTCAACCATCCGAGCTCAGGC TTGATGTGCAGCATTAAAGACCGAGGGGGACTTGCGAGTCATGATGCAGCAAGCCAACCTGAAATGGAATGTTTA ATTCCAAGTGACCTTCCTTTCACCCACAGAGAGCACCCTATACAAAAGTTATTTGATCCTCACTTACAGCGCTCC ATTGTGAGATGGGGGTTCGATCATGCGCTAGCCGCTCAACCGAGTGACGTAGCACTTATGGATCTTCCATTCGCC GCTATCCAGCAATCTGATGTTGCTTGCGGTGTACGATTGTTGGCCGCTCTTCGAAATCATGGCGTTCTCATCGAC CCTCAGATAGTACGCGCCGCATTGATCTCACGCATTGCCACGGCTCAGGTGCCTGGTCGGCGACGACACCGCTCC AGAGATGAAATCGAAATGACGGTGGAGAATTTGAAGAAGACGATAGACATGGCTTGGGGTTCGGAGATCCTCCCC GATGTGTCAAATATGCTGCGTGGCCTAGAGAAAAATATGTCAAAACTACGAAAACGTTACTCGAAGCTAATAGGG AGAGCACTCGGCCAAGACACGTGA |