Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3507
Gene name
LocationContig_192:25528..28102
Strand+
Gene length (bp)2574
Transcript length (bp)2112
Coding sequence length (bp)2112
Protein length (aa) 704

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 2.7E-08 62 97
PF04082 Fungal_trans Fungal specific transcription factor domain 3.6E-06 254 412

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P28348|NIRA_EMENI Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1 46 604 6.0E-41
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 55 564 6.0E-35
sp|O13360|FLUF_NEUCR Conidial development protein fluffy OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fl PE=2 SV=1 222 398 7.0E-13
sp|P43634|CHA4_YEAST Activatory protein CHA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHA4 PE=1 SV=1 60 526 7.0E-07
sp|Q9C0Z1|YKM1_SCHPO Uncharacterized transcriptional regulatory protein PB24D3.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.01 PE=3 SV=2 62 170 9.0E-07
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Swissprot ID Swissprot Description Start End E-value
sp|P28348|NIRA_EMENI Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1 46 604 6.0E-41
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 55 564 6.0E-35
sp|O13360|FLUF_NEUCR Conidial development protein fluffy OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fl PE=2 SV=1 222 398 7.0E-13
sp|P43634|CHA4_YEAST Activatory protein CHA4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHA4 PE=1 SV=1 60 526 7.0E-07
sp|Q9C0Z1|YKM1_SCHPO Uncharacterized transcriptional regulatory protein PB24D3.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.01 PE=3 SV=2 62 170 9.0E-07
sp|O94569|YGDC_SCHPO Uncharacterized transcriptional regulatory protein C1773.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1773.12 PE=3 SV=1 59 164 1.0E-06
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GO

GO Term Description Terminal node
GO:0003677 DNA binding Yes
GO:0008270 zinc ion binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0009987 cellular process No
GO:1901363 heterocyclic compound binding No
GO:0140110 transcription regulator activity No
GO:0051252 regulation of RNA metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0031323 regulation of cellular metabolic process No
GO:0003676 nucleic acid binding No
GO:0008152 metabolic process No
GO:0050794 regulation of cellular process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0005488 binding No
GO:0010468 regulation of gene expression No
GO:0044249 cellular biosynthetic process No
GO:0009058 biosynthetic process No
GO:0008150 biological_process No
GO:0046483 heterocycle metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0046872 metal ion binding No
GO:0090304 nucleic acid metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0080090 regulation of primary metabolic process No
GO:0044237 cellular metabolic process No
GO:0046914 transition metal ion binding No
GO:1901576 organic substance biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0018130 heterocycle biosynthetic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0043167 ion binding No
GO:0044238 primary metabolic process No
GO:0065007 biological regulation No
GO:0043169 cation binding No
GO:0016070 RNA metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0019222 regulation of metabolic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0050789 regulation of biological process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3507
MASSLTPQAWYRVGLRGFMAQKSSISGLRSLLPAPLPPGPPPVRPSSSDLEAISKRTVVQAACESCRQRKIKCDG
RRPSCAACGKLRRTCHYSTEPSESRAAALKRKHTEVVERLADHVDFIELLRTSSASGTREILSRIDAKHDVPSIL
QQVKDSNLLLQVRLAPKSTRNHAWGDAANAPRVFHDAQDPYEANLSAAETPEDPEASSAKSGPRNARIFPYHSAQ
LVDPRFGQVRASAWTQVTSDDVLVARLLAIYFQWDFPLLQFFHKDLFLDDLVAGRKRFCSSLLVNAILASASHGY
TDEPDRARFWTPCSLTYAFMAESKRLWEAEALEERLTTVQTACIFSLRHMADGSDKIGWEYARRATAMADRLGLF
RGWEPSDGEMSMARNVTAWGLFTWQSLCCSYLSKRPLVPEPPATPLPDSVVGEMCVHYPLGETPTPIFLSQCFRA
HAELRVLVSDFAHLQHPQPYQPSHMSLEDAFRFRDELLAWFDNLPAELQPSNVALPHQIHIHIHYQLILINLFRP
WASGAVCDGRGSGDPARVVQASQARLESLVRLYSSCHGLEGPDVTLPATLLILGSMALAKLTAESRARAEFGTLY
LCARGLRHQGLNNHLGALAFQVLRDLVKPAEPHVQTEFARIEAETAGVEMRPEELASDWPLYRWIFLSDEGLGKP
TRMAQCHTINSDEGAGGGYEEYEPVMEA*
Coding >Hirsu2|3507
ATGGCTTCTAGCCTCACCCCTCAGGCCTGGTACCGCGTTGGCCTCCGAGGATTCATGGCGCAGAAATCATCCATA
TCTGGTCTCAGGTCGCTTCTCCCGGCCCCGTTGCCCCCTGGGCCGCCGCCAGTCCGGCCTTCGTCTTCCGACCTC
GAGGCGATATCGAAGAGGACGGTGGTGCAGGCGGCCTGTGAATCCTGCAGGCAGCGCAAGATCAAGTGTGACGGA
AGACGCCCCAGTTGCGCTGCCTGCGGCAAGCTCCGCCGGACTTGTCACTACAGCACCGAGCCGTCCGAATCCCGG
GCAGCGGCTCTCAAGCGCAAGCACACCGAGGTCGTTGAGCGCCTGGCCGACCACGTGGACTTTATCGAGCTGCTG
AGGACGAGCTCGGCCAGCGGGACCAGAGAGATCCTGAGCCGGATAGACGCCAAGCACGATGTACCCTCCATCCTA
CAGCAGGTGAAGGACAGCAACCTGCTTCTCCAGGTGCGCCTGGCGCCCAAGTCGACCCGGAATCACGCATGGGGT
GACGCGGCGAACGCGCCTCGCGTCTTTCACGACGCCCAGGACCCCTATGAAGCCAACCTATCAGCCGCCGAGACC
CCCGAGGACCCGGAGGCCTCTTCGGCCAAATCCGGGCCCCGAAACGCCCGCATCTTCCCCTACCACTCCGCCCAG
CTCGTCGATCCGCGGTTTGGCCAGGTCCGGGCGTCCGCCTGGACTCAGGTCACGTCGGACGACGTGCTCGTGGCC
AGACTGCTGGCCATCTATTTTCAGTGGGACTTCCCTCTGCTCCAGTTCTTCCACAAGGACCTGTTCCTCGACGAC
CTGGTCGCCGGACGGAAGCGGTTCTGCTCTTCACTCCTCGTCAACGCCATCCTCGCTTCAGCTTCGCACGGCTAC
ACCGACGAGCCGGACAGAGCTCGTTTCTGGACTCCTTGCAGTCTGACATACGCCTTCATGGCCGAATCCAAGCGG
CTGTGGGAGGCCGAGGCGCTCGAGGAGAGGCTGACGACCGTTCAGACTGCCTGCATCTTCAGCCTGAGACACATG
GCCGACGGCTCCGACAAAATCGGCTGGGAATACGCGAGGCGGGCCACGGCCATGGCGGACCGTCTCGGCCTGTTT
AGAGGGTGGGAGCCCTCAGATGGCGAGATGAGCATGGCCCGTAACGTCACCGCCTGGGGCTTGTTCACCTGGCAA
AGCCTGTGTTGCTCCTATCTCTCCAAGCGGCCCCTCGTCCCCGAGCCACCGGCGACGCCGTTGCCCGATTCGGTT
GTCGGGGAGATGTGCGTCCACTACCCGCTTGGTGAAACCCCCACACCAATCTTCCTGAGCCAGTGCTTCAGAGCT
CACGCGGAGTTGAGAGTGCTCGTATCAGATTTCGCCCACCTCCAGCACCCGCAGCCGTATCAGCCTTCCCACATG
TCGCTGGAGGATGCCTTTCGTTTTCGAGATGAACTGCTTGCATGGTTCGACAACCTGCCGGCTGAGCTTCAGCCC
AGCAACGTCGCTCTACCACATCAGATACATATCCACATACACTACCAACTGATCCTCATCAATCTCTTTAGGCCG
TGGGCGTCCGGAGCGGTTTGCGATGGTCGAGGCAGCGGCGACCCGGCCAGGGTTGTCCAAGCGTCGCAGGCGCGT
CTGGAGAGTCTCGTTCGCCTCTACTCCAGCTGCCACGGGCTTGAGGGCCCCGACGTGACGCTACCCGCCACTCTT
TTGATTTTGGGCTCCATGGCCCTAGCAAAGCTCACGGCAGAATCGAGAGCAAGGGCCGAGTTTGGCACCCTCTAT
CTCTGCGCCAGAGGGCTGCGGCACCAGGGGCTGAATAATCATCTTGGCGCGCTCGCCTTTCAGGTCCTGCGGGAC
TTGGTCAAGCCGGCGGAGCCTCATGTCCAGACCGAGTTCGCCCGCATCGAGGCCGAGACGGCGGGCGTCGAGATG
CGGCCCGAAGAATTGGCCTCGGATTGGCCGCTGTACAGATGGATCTTTCTGTCTGACGAGGGCCTGGGCAAGCCG
ACGAGAATGGCACAGTGTCACACGATCAACAGCGACGAGGGCGCCGGGGGTGGCTACGAAGAGTACGAGCCCGTG
ATGGAGGCATGA
Transcript >Hirsu2|3507
ATGGCTTCTAGCCTCACCCCTCAGGCCTGGTACCGCGTTGGCCTCCGAGGATTCATGGCGCAGAAATCATCCATA
TCTGGTCTCAGGTCGCTTCTCCCGGCCCCGTTGCCCCCTGGGCCGCCGCCAGTCCGGCCTTCGTCTTCCGACCTC
GAGGCGATATCGAAGAGGACGGTGGTGCAGGCGGCCTGTGAATCCTGCAGGCAGCGCAAGATCAAGTGTGACGGA
AGACGCCCCAGTTGCGCTGCCTGCGGCAAGCTCCGCCGGACTTGTCACTACAGCACCGAGCCGTCCGAATCCCGG
GCAGCGGCTCTCAAGCGCAAGCACACCGAGGTCGTTGAGCGCCTGGCCGACCACGTGGACTTTATCGAGCTGCTG
AGGACGAGCTCGGCCAGCGGGACCAGAGAGATCCTGAGCCGGATAGACGCCAAGCACGATGTACCCTCCATCCTA
CAGCAGGTGAAGGACAGCAACCTGCTTCTCCAGGTGCGCCTGGCGCCCAAGTCGACCCGGAATCACGCATGGGGT
GACGCGGCGAACGCGCCTCGCGTCTTTCACGACGCCCAGGACCCCTATGAAGCCAACCTATCAGCCGCCGAGACC
CCCGAGGACCCGGAGGCCTCTTCGGCCAAATCCGGGCCCCGAAACGCCCGCATCTTCCCCTACCACTCCGCCCAG
CTCGTCGATCCGCGGTTTGGCCAGGTCCGGGCGTCCGCCTGGACTCAGGTCACGTCGGACGACGTGCTCGTGGCC
AGACTGCTGGCCATCTATTTTCAGTGGGACTTCCCTCTGCTCCAGTTCTTCCACAAGGACCTGTTCCTCGACGAC
CTGGTCGCCGGACGGAAGCGGTTCTGCTCTTCACTCCTCGTCAACGCCATCCTCGCTTCAGCTTCGCACGGCTAC
ACCGACGAGCCGGACAGAGCTCGTTTCTGGACTCCTTGCAGTCTGACATACGCCTTCATGGCCGAATCCAAGCGG
CTGTGGGAGGCCGAGGCGCTCGAGGAGAGGCTGACGACCGTTCAGACTGCCTGCATCTTCAGCCTGAGACACATG
GCCGACGGCTCCGACAAAATCGGCTGGGAATACGCGAGGCGGGCCACGGCCATGGCGGACCGTCTCGGCCTGTTT
AGAGGGTGGGAGCCCTCAGATGGCGAGATGAGCATGGCCCGTAACGTCACCGCCTGGGGCTTGTTCACCTGGCAA
AGCCTGTGTTGCTCCTATCTCTCCAAGCGGCCCCTCGTCCCCGAGCCACCGGCGACGCCGTTGCCCGATTCGGTT
GTCGGGGAGATGTGCGTCCACTACCCGCTTGGTGAAACCCCCACACCAATCTTCCTGAGCCAGTGCTTCAGAGCT
CACGCGGAGTTGAGAGTGCTCGTATCAGATTTCGCCCACCTCCAGCACCCGCAGCCGTATCAGCCTTCCCACATG
TCGCTGGAGGATGCCTTTCGTTTTCGAGATGAACTGCTTGCATGGTTCGACAACCTGCCGGCTGAGCTTCAGCCC
AGCAACGTCGCTCTACCACATCAGATACATATCCACATACACTACCAACTGATCCTCATCAATCTCTTTAGGCCG
TGGGCGTCCGGAGCGGTTTGCGATGGTCGAGGCAGCGGCGACCCGGCCAGGGTTGTCCAAGCGTCGCAGGCGCGT
CTGGAGAGTCTCGTTCGCCTCTACTCCAGCTGCCACGGGCTTGAGGGCCCCGACGTGACGCTACCCGCCACTCTT
TTGATTTTGGGCTCCATGGCCCTAGCAAAGCTCACGGCAGAATCGAGAGCAAGGGCCGAGTTTGGCACCCTCTAT
CTCTGCGCCAGAGGGCTGCGGCACCAGGGGCTGAATAATCATCTTGGCGCGCTCGCCTTTCAGGTCCTGCGGGAC
TTGGTCAAGCCGGCGGAGCCTCATGTCCAGACCGAGTTCGCCCGCATCGAGGCCGAGACGGCGGGCGTCGAGATG
CGGCCCGAAGAATTGGCCTCGGATTGGCCGCTGTACAGATGGATCTTTCTGTCTGACGAGGGCCTGGGCAAGCCG
ACGAGAATGGCACAGTGTCACACGATCAACAGCGACGAGGGCGCCGGGGGTGGCTACGAAGAGTACGAGCCCGTG
ATGGAGGCATGA
Gene >Hirsu2|3507
ATGGCTTCTAGCCTCACCCCTCAGGCCTGGTACCGCGTTGGCCTCCGAGGATTCATGGCGCAGAAATCATCCATA
TCTGGTCTCAGGTCGCTTCTCCCGGCCCCGTTGCCCCCTGGGCCGCCGCCAGTCCGGCCTTCGTCTTCCGACCTC
GAGGCGATATCGAAGAGGACGGTGGTGCAGGCGGCCTGTGAATCCTGCAGGCAGCGCAAGATCAAGGTATGTGCT
GCGGTCTCGTGAAGAATGAGAAGAAAGCGGAATGGACGAAGAAAAAAGCGACGACTTCATGGGGGGGGTCGCCCA
TCCTACTCTCGTCATCGTCCCGCTCATCCCTCTCCAACTCTCCCCCATATCGCCTGCTCTTGGTCACTATCGTCG
TGTCTTGCATCCTCGCTCCCGCCTTTTGACCACGTCTCTGTTTACGCAATCGTGAACTGACCGCCTCGGCACTCA
TCGCCCGAGTCGTCCTTCGCCGTCCAAGTGTGACGGAAGACGCCCCAGTTGCGCTGCCTGCGGCAAGCTCCGCCG
GACTTGTCACTACAGCACCGAGCCGTCCGAATCCCGGGCAGCGGCTCTCAAGCGCAAGCACACCGAGGTCGTTGA
GCGCCTGGCCGACCACGTGGACTTTATCGAGCTGCTGAGGACGAGCTCGGCCAGCGGGACCAGAGAGATCCTGAG
CCGGATAGACGCCAAGCACGATGTACCCTCCATCCTACAGCAGGTGAAGGACAGCAACCTGCTTCTCCAGGTGCG
CCTGGCGCCCAAGTCGACCCGGAATCACGCATGGGGTGACGCGGCGAACGCGCCTCGCGTCTTTCACGACGCCCA
GGACCCCTATGAAGCCAACCTATCAGCCGCCGAGACCCCCGAGGACCCGGAGGCCTCTTCGGCCAAATCCGGGCC
CCGAAACGCCCGCATCTTCCCCTACCACTCCGCCCAGCTCGTCGATCCGCGGTTTGGCCAGGTCCGGGCGTCCGC
CTGGACTCAGGTCACGTCGGACGACGTGCTCGTGGCCAGACTGCTGGCCATCTATTTTCAGTGGGACTTCCCTCT
GCTCCAGTTCTTCCACAAGGACCTGTTCCTCGACGACCTGGTCGCCGGACGGAAGCGGTTCTGCTCTTCACTCCT
CGTCAACGCCATCCTCGCTTCAGCTTCGGTAAGAACCAAGCCGCGGGGCGTGGCACCTTGAATGCTCACGCGCAC
CTCGGCAGCACGGCTACACCGACGAGCCGGACAGAGCTCGTTTCTGGACTCCTTGCAGTCTGACATACGCCTTCA
TGGCCGAATCCAAGCGGCTGTGGGAGGCCGAGGCGCTCGAGGAGAGGCTGACGACCGTTCAGACTGCCTGCATCT
TCAGCCTGAGACACATGGCCGACGGCTCCGACAAAATCGGCTGGGAATACGCGAGGCGGGCCACGGCCATGGCGG
ACCGTCTCGGCCTGTTTAGAGGGTGGGAGCCCTCAGATGGCGAGATGAGCATGGCCCGTAACGTCACCGCCTGGG
GCTTGTTCACCTGGCAAAGGTGCGTCGCCACGGCCCCAGACGTCCGCAGGTCTCCGGTCTTGGGCTGACCACGGA
GGATGGCGCCGGCCCCAACGCGCAGCCTGTGTTGCTCCTATCTCTCCAAGCGGCCCCTCGTCCCCGAGCCACCGG
CGACGCCGTTGCCCGATTCGGTTGTCGGGGAGATGTGCGTCCACTACCCGCTTGGTGAAACCCCCACACCAATCT
TCCTGAGCCAGTGCTTCAGAGCTCACGCGGAGTTGAGAGTGCTCGTATCAGATTTCGCCCACCTCCAGCACCCGC
AGCCGTATCAGCCTTCCCACATGTCGCTGGAGGATGCCTTTCGTTTTCGAGATGAACTGCTTGCATGGTTCGACA
ACCTGCCGGCTGAGCTTCAGCCCAGCAACGTCGCTCTACCACATCAGATACATATCCAGTAAGCCCCGGCGGCGC
ACATTGTCCTGGAGGCTCAGGGGCTGACGCGAAGGGGGTCTTCACAGCATACACTACCAACTGATCCTCATCAAT
CTCTTTAGGCCGTGGGCGTCCGGAGCGGTTTGCGATGGTCGAGGCAGCGGCGACCCGGCCAGGGTTGTCCAAGCG
TCGCAGGCGCGTCTGGAGAGTCTCGTTCGCCTCTACTCCAGCTGCCACGGGCTTGAGGGCCCCGACGTGACGCTA
CCCGCCACTCTTTTGATTTTGGGCTCCATGGCCCTAGCAAAGCTCACGGCAGAATCGAGAGCAAGGGCCGAGTTT
GGCACCCTCTATCTCTGCGCCAGAGGGCTGCGGCACCAGGGGCTGAATAATCATCTTGGCGCGCTCGCCTTTCAG
GTCCTGCGGGACTTGGTCAAGCCGGCGGAGCCTCATGTCCAGACCGAGTTCGCCCGCATCGAGGCCGAGACGGCG
GGCGTCGAGATGCGGCCCGAAGAATTGGCCTCGGATTGGCCGCTGTACAGATGGATCTTTCTGTCTGACGAGGGC
CTGGGCAAGCCGACGAGAATGGCACAGTGTCACACGATCAACAGCGACGAGGGCGCCGGGGGTGGCTACGAAGAG
TACGAGCCCGTGATGGAGGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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