© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3506 |
| Gene name | |
| Location | Contig_192:20791..22552 |
| Strand | + |
| Gene length (bp) | 1761 |
| Transcript length (bp) | 1761 |
| Coding sequence length (bp) | 1761 |
| Protein length (aa) | 587 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.1557 | 0.072 | 0.8352 | 0.5046 | 0.083 | 0.0058 | 0.1751 | 0.0872 | 0.1721 | 0.0012 |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 20 | 0.999757 |
| Orthofinder run ID | 4 |
| Orthogroup | 6104 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3506 MMNKYVSLLAGFAAVQGVMAELAADDPARKAEGFGNACLQNDMPESGPDYPCNAVVRRQMFCETTTSSLTEQKDC ICAEGWKEWFFENHKGCVDCKVYHGVDVEEAGPYWKKVLEKTEKGYCKPGDAAKSFDQFFQQFRMAEVEKAMVGP DKAPVVHAEVDKDGNRDISVGKYFNPTHPKPSAASKPAGDDKPTPVYRKKLGGYHDVTIVAVATVCASPGEEAVH SAAGPVATTLAPKPSGAPFPTNSSISTVSGDKSCVYADLRAVVIQSGCVAEFKDLDDNTAPTYACWSKHVRNDNI DKQPFLSFKAEIAATFPDARFCGCIENELATGVEIKIKAGFGGADITAKTGFTPIVPNGETLVVDKKHDETKPRI GASAEPNFSGRSSFPTLNKEVVCAAAAPASKAAPANVNFKALITVTTVEKEGHKVYTPAVNGEPVKVVANPSKAA KASPSSPGAGNKAGPSGPDADEDDEPAGSSSSRVSPSGPGANEDDEPADSSSKVSPSSSGETGPEGPDGQPAPKS SASDSAAPKGAAADKAANGPGRAAPTGSVTPKESSLPLSSGATAMGVPALAAAAALLVAAL* |
| Coding | >Hirsu2|3506 ATGATGAACAAGTACGTCTCCCTCCTTGCCGGCTTCGCGGCCGTGCAGGGCGTCATGGCCGAGCTGGCCGCCGAC GATCCGGCCCGCAAGGCGGAGGGCTTCGGCAACGCCTGCCTGCAGAACGACATGCCCGAGTCTGGCCCAGACTAC CCTTGCAACGCCGTCGTGCGGCGTCAGATGTTCTGCGAGACGACCACGTCTTCCCTGACGGAGCAGAAGGACTGC ATATGCGCCGAGGGCTGGAAGGAGTGGTTCTTCGAGAACCACAAGGGCTGCGTCGACTGCAAGGTGTACCACGGC GTTGACGTCGAGGAGGCCGGCCCGTACTGGAAGAAGGTCCTCGAGAAGACCGAGAAGGGCTACTGCAAGCCGGGA GATGCCGCCAAGAGCTTCGACCAGTTCTTCCAACAATTCCGGATGGCAGAGGTCGAGAAGGCCATGGTCGGGCCG GATAAGGCGCCCGTGGTCCACGCCGAGGTTGACAAGGACGGCAACCGGGACATCAGCGTCGGCAAGTACTTCAAC CCGACGCACCCCAAGCCCAGCGCCGCCAGCAAGCCCGCCGGCGACGACAAGCCCACGCCGGTCTACAGGAAGAAG CTGGGCGGCTACCACGACGTGACCATTGTCGCCGTCGCCACCGTCTGCGCCTCGCCCGGCGAAGAAGCCGTCCAC AGCGCTGCCGGCCCGGTCGCCACCACCCTGGCCCCCAAGCCTTCCGGCGCCCCCTTCCCGACCAACAGCAGCATC TCGACCGTGTCCGGTGACAAATCGTGCGTCTACGCCGATCTCCGTGCTGTCGTTATCCAGAGCGGCTGCGTGGCC GAGTTCAAGGACCTGGATGACAACACCGCCCCGACCTACGCCTGCTGGTCCAAGCATGTCCGCAACGACAACATC GACAAGCAGCCCTTCCTGTCCTTCAAGGCCGAGATCGCCGCCACCTTCCCCGATGCTCGCTTCTGCGGCTGCATT GAGAACGAGCTGGCGACCGGCGTGGAGATCAAGATCAAGGCCGGCTTCGGCGGCGCCGACATCACGGCCAAGACC GGCTTCACCCCCATCGTCCCCAACGGCGAGACCCTGGTCGTCGACAAGAAGCACGACGAGACGAAGCCCCGCATC GGCGCCTCGGCCGAGCCCAACTTCAGCGGCCGGTCCAGCTTCCCTACCCTCAACAAGGAGGTTGTCTGCGCCGCC GCCGCCCCGGCCTCCAAGGCTGCCCCCGCCAACGTCAACTTCAAGGCCCTCATCACTGTCACCACCGTCGAGAAG GAGGGCCACAAGGTCTACACCCCCGCCGTCAACGGCGAGCCCGTCAAGGTCGTCGCCAACCCCAGCAAGGCCGCC AAGGCCAGCCCCAGCTCGCCCGGCGCCGGTAACAAGGCCGGCCCGAGCGGCCCCGATGCTGATGAGGACGACGAG CCGGCCGGCTCCAGCAGCAGCAGGGTCTCCCCCAGCGGCCCCGGCGCTAATGAGGACGACGAGCCGGCCGACTCC AGCAGCAAGGTCTCCCCCAGCAGCTCCGGCGAGACCGGGCCCGAGGGCCCTGATGGCCAGCCCGCCCCCAAGAGC TCCGCCAGCGACAGCGCCGCCCCCAAGGGCGCCGCCGCCGATAAGGCTGCCAACGGCCCCGGCCGTGCCGCTCCC ACCGGCTCTGTCACCCCCAAGGAGTCCAGCCTGCCCCTCAGCAGCGGTGCCACCGCCATGGGCGTCCCTGCCCTG GCCGCCGCCGCCGCCCTCCTGGTTGCTGCTCTGTAA |
| Transcript | >Hirsu2|3506 ATGATGAACAAGTACGTCTCCCTCCTTGCCGGCTTCGCGGCCGTGCAGGGCGTCATGGCCGAGCTGGCCGCCGAC GATCCGGCCCGCAAGGCGGAGGGCTTCGGCAACGCCTGCCTGCAGAACGACATGCCCGAGTCTGGCCCAGACTAC CCTTGCAACGCCGTCGTGCGGCGTCAGATGTTCTGCGAGACGACCACGTCTTCCCTGACGGAGCAGAAGGACTGC ATATGCGCCGAGGGCTGGAAGGAGTGGTTCTTCGAGAACCACAAGGGCTGCGTCGACTGCAAGGTGTACCACGGC GTTGACGTCGAGGAGGCCGGCCCGTACTGGAAGAAGGTCCTCGAGAAGACCGAGAAGGGCTACTGCAAGCCGGGA GATGCCGCCAAGAGCTTCGACCAGTTCTTCCAACAATTCCGGATGGCAGAGGTCGAGAAGGCCATGGTCGGGCCG GATAAGGCGCCCGTGGTCCACGCCGAGGTTGACAAGGACGGCAACCGGGACATCAGCGTCGGCAAGTACTTCAAC CCGACGCACCCCAAGCCCAGCGCCGCCAGCAAGCCCGCCGGCGACGACAAGCCCACGCCGGTCTACAGGAAGAAG CTGGGCGGCTACCACGACGTGACCATTGTCGCCGTCGCCACCGTCTGCGCCTCGCCCGGCGAAGAAGCCGTCCAC AGCGCTGCCGGCCCGGTCGCCACCACCCTGGCCCCCAAGCCTTCCGGCGCCCCCTTCCCGACCAACAGCAGCATC TCGACCGTGTCCGGTGACAAATCGTGCGTCTACGCCGATCTCCGTGCTGTCGTTATCCAGAGCGGCTGCGTGGCC GAGTTCAAGGACCTGGATGACAACACCGCCCCGACCTACGCCTGCTGGTCCAAGCATGTCCGCAACGACAACATC GACAAGCAGCCCTTCCTGTCCTTCAAGGCCGAGATCGCCGCCACCTTCCCCGATGCTCGCTTCTGCGGCTGCATT GAGAACGAGCTGGCGACCGGCGTGGAGATCAAGATCAAGGCCGGCTTCGGCGGCGCCGACATCACGGCCAAGACC GGCTTCACCCCCATCGTCCCCAACGGCGAGACCCTGGTCGTCGACAAGAAGCACGACGAGACGAAGCCCCGCATC GGCGCCTCGGCCGAGCCCAACTTCAGCGGCCGGTCCAGCTTCCCTACCCTCAACAAGGAGGTTGTCTGCGCCGCC GCCGCCCCGGCCTCCAAGGCTGCCCCCGCCAACGTCAACTTCAAGGCCCTCATCACTGTCACCACCGTCGAGAAG GAGGGCCACAAGGTCTACACCCCCGCCGTCAACGGCGAGCCCGTCAAGGTCGTCGCCAACCCCAGCAAGGCCGCC AAGGCCAGCCCCAGCTCGCCCGGCGCCGGTAACAAGGCCGGCCCGAGCGGCCCCGATGCTGATGAGGACGACGAG CCGGCCGGCTCCAGCAGCAGCAGGGTCTCCCCCAGCGGCCCCGGCGCTAATGAGGACGACGAGCCGGCCGACTCC AGCAGCAAGGTCTCCCCCAGCAGCTCCGGCGAGACCGGGCCCGAGGGCCCTGATGGCCAGCCCGCCCCCAAGAGC TCCGCCAGCGACAGCGCCGCCCCCAAGGGCGCCGCCGCCGATAAGGCTGCCAACGGCCCCGGCCGTGCCGCTCCC ACCGGCTCTGTCACCCCCAAGGAGTCCAGCCTGCCCCTCAGCAGCGGTGCCACCGCCATGGGCGTCCCTGCCCTG GCCGCCGCCGCCGCCCTCCTGGTTGCTGCTCTGTAA |
| Gene | >Hirsu2|3506 ATGATGAACAAGTACGTCTCCCTCCTTGCCGGCTTCGCGGCCGTGCAGGGCGTCATGGCCGAGCTGGCCGCCGAC GATCCGGCCCGCAAGGCGGAGGGCTTCGGCAACGCCTGCCTGCAGAACGACATGCCCGAGTCTGGCCCAGACTAC CCTTGCAACGCCGTCGTGCGGCGTCAGATGTTCTGCGAGACGACCACGTCTTCCCTGACGGAGCAGAAGGACTGC ATATGCGCCGAGGGCTGGAAGGAGTGGTTCTTCGAGAACCACAAGGGCTGCGTCGACTGCAAGGTGTACCACGGC GTTGACGTCGAGGAGGCCGGCCCGTACTGGAAGAAGGTCCTCGAGAAGACCGAGAAGGGCTACTGCAAGCCGGGA GATGCCGCCAAGAGCTTCGACCAGTTCTTCCAACAATTCCGGATGGCAGAGGTCGAGAAGGCCATGGTCGGGCCG GATAAGGCGCCCGTGGTCCACGCCGAGGTTGACAAGGACGGCAACCGGGACATCAGCGTCGGCAAGTACTTCAAC CCGACGCACCCCAAGCCCAGCGCCGCCAGCAAGCCCGCCGGCGACGACAAGCCCACGCCGGTCTACAGGAAGAAG CTGGGCGGCTACCACGACGTGACCATTGTCGCCGTCGCCACCGTCTGCGCCTCGCCCGGCGAAGAAGCCGTCCAC AGCGCTGCCGGCCCGGTCGCCACCACCCTGGCCCCCAAGCCTTCCGGCGCCCCCTTCCCGACCAACAGCAGCATC TCGACCGTGTCCGGTGACAAATCGTGCGTCTACGCCGATCTCCGTGCTGTCGTTATCCAGAGCGGCTGCGTGGCC GAGTTCAAGGACCTGGATGACAACACCGCCCCGACCTACGCCTGCTGGTCCAAGCATGTCCGCAACGACAACATC GACAAGCAGCCCTTCCTGTCCTTCAAGGCCGAGATCGCCGCCACCTTCCCCGATGCTCGCTTCTGCGGCTGCATT GAGAACGAGCTGGCGACCGGCGTGGAGATCAAGATCAAGGCCGGCTTCGGCGGCGCCGACATCACGGCCAAGACC GGCTTCACCCCCATCGTCCCCAACGGCGAGACCCTGGTCGTCGACAAGAAGCACGACGAGACGAAGCCCCGCATC GGCGCCTCGGCCGAGCCCAACTTCAGCGGCCGGTCCAGCTTCCCTACCCTCAACAAGGAGGTTGTCTGCGCCGCC GCCGCCCCGGCCTCCAAGGCTGCCCCCGCCAACGTCAACTTCAAGGCCCTCATCACTGTCACCACCGTCGAGAAG GAGGGCCACAAGGTCTACACCCCCGCCGTCAACGGCGAGCCCGTCAAGGTCGTCGCCAACCCCAGCAAGGCCGCC AAGGCCAGCCCCAGCTCGCCCGGCGCCGGTAACAAGGCCGGCCCGAGCGGCCCCGATGCTGATGAGGACGACGAG CCGGCCGGCTCCAGCAGCAGCAGGGTCTCCCCCAGCGGCCCCGGCGCTAATGAGGACGACGAGCCGGCCGACTCC AGCAGCAAGGTCTCCCCCAGCAGCTCCGGCGAGACCGGGCCCGAGGGCCCTGATGGCCAGCCCGCCCCCAAGAGC TCCGCCAGCGACAGCGCCGCCCCCAAGGGCGCCGCCGCCGATAAGGCTGCCAACGGCCCCGGCCGTGCCGCTCCC ACCGGCTCTGTCACCCCCAAGGAGTCCAGCCTGCCCCTCAGCAGCGGTGCCACCGCCATGGGCGTCCCTGCCCTG GCCGCCGCCGCCGCCCTCCTGGTTGCTGCTCTGTAA |