Protein ID | Hirsu2|3505 |
Gene name | |
Location | Contig_192:10141..11509 |
Strand | - |
Gene length (bp) | 1368 |
Transcript length (bp) | 1296 |
Coding sequence length (bp) | 1296 |
Protein length (aa) | 432 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 48 | 67 | 19 |
2 | 150 | 172 | 22 |
3 | 212 | 234 | 22 |
4 | 239 | 261 | 22 |
5 | 290 | 312 | 22 |
6 | 332 | 354 | 22 |
7 | 361 | 383 | 22 |
8 | 398 | 420 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3505 MVVTTDVFTYIATVAEILNEGLPRAAWSTIGDHSSRSRVQRLRLAKTLILTQAVLGLGMSVVFLGAADGFARAFV PGEVRRQSVMYVRISSFSALSSALETAVAAAARALDQPDVPLAFSCVKFATNIVLDMLLISTFRVSSAEPTVNMQ AAIQLACNLTSAFVVLLYFLLSNRGRTGVERHGSTAPALPALMILLRPGITTLIESAVRNALYLWLVSNIISMGA TYATAWGVFNTIRWGLIMIPVSALEATTLTFVGHNWGRWRRETGRTTVRPRASLQSLYRISRPAFVSVALALAFE VPICILMSLVGVRPFARYISGSDETAVVTERMWRTMDWCYVIFAATTQLSAVLLATRPKLYLWQSLASNLLYVLP WAIACHLAHLDESNAWTYHALVSGGSMVFSLFSVLAVLALWAWVLKTGRARLGAVK* |
Coding | >Hirsu2|3505 ATGGTCGTCACGACGGACGTATTCACGTACATCGCAACCGTCGCCGAGATCCTCAACGAGGGCCTCCCCCGAGCG GCCTGGTCCACCATCGGCGACCACTCCTCCCGCAGCCGGGTCCAGCGGCTGCGGCTGGCCAAGACGCTGATCCTG ACGCAGGCCGTCCTCGGCCTCGGCATGTCCGTCGTCTTCCTCGGCGCCGCCGACGGCTTCGCCCGGGCCTTCGTC CCCGGCGAGGTGCGCCGGCAGAGCGTCATGTACGTCCGCATCAGCAGCTTCTCGGCCCTCAGCAGCGCGCTCGAG ACGGCCGTCGCGGCGGCGGCCAGGGCGCTGGACCAGCCCGACGTGCCGCTGGCGTTTAGCTGCGTCAAGTTCGCC ACCAACATCGTACTCGACATGCTGCTCATCTCGACCTTTAGAGTCTCGTCCGCCGAGCCGACGGTCAACATGCAG GCCGCCATCCAGCTGGCCTGCAACCTGACCTCTGCCTTCGTCGTCCTCCTCTACTTCTTGCTCTCGAACCGGGGC CGGACAGGAGTGGAGCGGCACGGGAGCACGGCGCCAGCTTTGCCGGCTCTGATGATCTTGCTCCGCCCCGGCATC ACCACCCTCATCGAGTCGGCCGTCCGGAACGCCCTCTACCTCTGGCTGGTGAGCAACATCATCTCCATGGGCGCC ACCTACGCCACCGCCTGGGGCGTCTTCAACACGATCCGCTGGGGCCTCATCATGATACCCGTCTCGGCCCTCGAA GCCACCACCTTGACCTTCGTCGGACACAATTGGGGCCGGTGGCGGCGCGAGACGGGCAGGACCACGGTCCGGCCT CGCGCGAGCCTCCAGTCCCTCTATCGGATCTCGCGCCCGGCCTTCGTGTCCGTTGCCCTGGCGCTCGCCTTCGAG GTCCCCATCTGCATCCTCATGTCCCTCGTGGGCGTCCGCCCCTTCGCCCGCTACATCAGCGGCAGCGACGAGACG GCCGTCGTGACGGAGCGCATGTGGAGGACGATGGACTGGTGCTACGTCATCTTCGCCGCCACGACCCAGCTGTCC GCCGTCCTGCTTGCGACGAGACCCAAGTTGTACCTGTGGCAGAGCCTGGCCAGCAACTTGCTCTACGTCCTGCCC TGGGCCATTGCTTGCCATCTCGCCCATCTGGACGAGAGCAATGCCTGGACGTACCACGCGCTTGTCTCGGGCGGT AGCATGGTCTTCAGCCTCTTCAGTGTGCTCGCCGTCCTGGCCTTGTGGGCCTGGGTGTTGAAGACCGGCAGAGCC CGCCTGGGCGCAGTCAAGTAG |
Transcript | >Hirsu2|3505 ATGGTCGTCACGACGGACGTATTCACGTACATCGCAACCGTCGCCGAGATCCTCAACGAGGGCCTCCCCCGAGCG GCCTGGTCCACCATCGGCGACCACTCCTCCCGCAGCCGGGTCCAGCGGCTGCGGCTGGCCAAGACGCTGATCCTG ACGCAGGCCGTCCTCGGCCTCGGCATGTCCGTCGTCTTCCTCGGCGCCGCCGACGGCTTCGCCCGGGCCTTCGTC CCCGGCGAGGTGCGCCGGCAGAGCGTCATGTACGTCCGCATCAGCAGCTTCTCGGCCCTCAGCAGCGCGCTCGAG ACGGCCGTCGCGGCGGCGGCCAGGGCGCTGGACCAGCCCGACGTGCCGCTGGCGTTTAGCTGCGTCAAGTTCGCC ACCAACATCGTACTCGACATGCTGCTCATCTCGACCTTTAGAGTCTCGTCCGCCGAGCCGACGGTCAACATGCAG GCCGCCATCCAGCTGGCCTGCAACCTGACCTCTGCCTTCGTCGTCCTCCTCTACTTCTTGCTCTCGAACCGGGGC CGGACAGGAGTGGAGCGGCACGGGAGCACGGCGCCAGCTTTGCCGGCTCTGATGATCTTGCTCCGCCCCGGCATC ACCACCCTCATCGAGTCGGCCGTCCGGAACGCCCTCTACCTCTGGCTGGTGAGCAACATCATCTCCATGGGCGCC ACCTACGCCACCGCCTGGGGCGTCTTCAACACGATCCGCTGGGGCCTCATCATGATACCCGTCTCGGCCCTCGAA GCCACCACCTTGACCTTCGTCGGACACAATTGGGGCCGGTGGCGGCGCGAGACGGGCAGGACCACGGTCCGGCCT CGCGCGAGCCTCCAGTCCCTCTATCGGATCTCGCGCCCGGCCTTCGTGTCCGTTGCCCTGGCGCTCGCCTTCGAG GTCCCCATCTGCATCCTCATGTCCCTCGTGGGCGTCCGCCCCTTCGCCCGCTACATCAGCGGCAGCGACGAGACG GCCGTCGTGACGGAGCGCATGTGGAGGACGATGGACTGGTGCTACGTCATCTTCGCCGCCACGACCCAGCTGTCC GCCGTCCTGCTTGCGACGAGACCCAAGTTGTACCTGTGGCAGAGCCTGGCCAGCAACTTGCTCTACGTCCTGCCC TGGGCCATTGCTTGCCATCTCGCCCATCTGGACGAGAGCAATGCCTGGACGTACCACGCGCTTGTCTCGGGCGGT AGCATGGTCTTCAGCCTCTTCAGTGTGCTCGCCGTCCTGGCCTTGTGGGCCTGGGTGTTGAAGACCGGCAGAGCC CGCCTGGGCGCAGTCAAGTAG |
Gene | >Hirsu2|3505 ATGGTCGTCACGACGGAGTGAGTGGCTCCGTCGACATCCAGCTCCTCTTCGTGGCACATACGCACGCGGACTGAC AGTCGGCGCCTCAGCGTATTCACGTACATCGCAACCGTCGCCGAGATCCTCAACGAGGGCCTCCCCCGAGCGGCC TGGTCCACCATCGGCGACCACTCCTCCCGCAGCCGGGTCCAGCGGCTGCGGCTGGCCAAGACGCTGATCCTGACG CAGGCCGTCCTCGGCCTCGGCATGTCCGTCGTCTTCCTCGGCGCCGCCGACGGCTTCGCCCGGGCCTTCGTCCCC GGCGAGGTGCGCCGGCAGAGCGTCATGTACGTCCGCATCAGCAGCTTCTCGGCCCTCAGCAGCGCGCTCGAGACG GCCGTCGCGGCGGCGGCCAGGGCGCTGGACCAGCCCGACGTGCCGCTGGCGTTTAGCTGCGTCAAGTTCGCCACC AACATCGTACTCGACATGCTGCTCATCTCGACCTTTAGAGTCTCGTCCGCCGAGCCGACGGTCAACATGCAGGCC GCCATCCAGCTGGCCTGCAACCTGACCTCTGCCTTCGTCGTCCTCCTCTACTTCTTGCTCTCGAACCGGGGCCGG ACAGGAGTGGAGCGGCACGGGAGCACGGCGCCAGCTTTGCCGGCTCTGATGATCTTGCTCCGCCCCGGCATCACC ACCCTCATCGAGTCGGCCGTCCGGAACGCCCTCTACCTCTGGCTGGTGAGCAACATCATCTCCATGGGCGCCACC TACGCCACCGCCTGGGGCGTCTTCAACACGATCCGCTGGGGCCTCATCATGATACCCGTCTCGGCCCTCGAAGCC ACCACCTTGACCTTCGTCGGACACAATTGGGGCCGGTGGCGGCGCGAGACGGGCAGGACCACGGTCCGGCCTCGC GCGAGCCTCCAGTCCCTCTATCGGATCTCGCGCCCGGCCTTCGTGTCCGTTGCCCTGGCGCTCGCCTTCGAGGTC CCCATCTGCATCCTCATGTCCCTCGTGGGCGTCCGCCCCTTCGCCCGCTACATCAGCGGCAGCGACGAGACGGCC GTCGTGACGGAGCGCATGTGGAGGACGATGGACTGGTGCTACGTCATCTTCGCCGCCACGACCCAGCTGTCCGCC GTCCTGCTTGCGACGAGACCCAAGTTGTACCTGTGGCAGAGCCTGGCCAGCAACTTGCTCTACGTCCTGCCCTGG GCCATTGCTTGCCATCTCGCCCATCTGGACGAGAGCAATGCCTGGACGTACCACGCGCTTGTCTCGGGCGGTAGC ATGGTCTTCAGCCTCTTCAGTGTGCTCGCCGTCCTGGCCTTGTGGGCCTGGGTGTTGAAGACCGGCAGAGCCCGC CTGGGCGCAGTCAAGTAG |