© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3505 |
| Gene name | |
| Location | Contig_192:10141..11509 |
| Strand | - |
| Gene length (bp) | 1368 |
| Transcript length (bp) | 1296 |
| Coding sequence length (bp) | 1296 |
| Protein length (aa) | 432 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 48 | 67 | 19 |
| 2 | 150 | 172 | 22 |
| 3 | 212 | 234 | 22 |
| 4 | 239 | 261 | 22 |
| 5 | 290 | 312 | 22 |
| 6 | 332 | 354 | 22 |
| 7 | 361 | 383 | 22 |
| 8 | 398 | 420 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3505 MVVTTDVFTYIATVAEILNEGLPRAAWSTIGDHSSRSRVQRLRLAKTLILTQAVLGLGMSVVFLGAADGFARAFV PGEVRRQSVMYVRISSFSALSSALETAVAAAARALDQPDVPLAFSCVKFATNIVLDMLLISTFRVSSAEPTVNMQ AAIQLACNLTSAFVVLLYFLLSNRGRTGVERHGSTAPALPALMILLRPGITTLIESAVRNALYLWLVSNIISMGA TYATAWGVFNTIRWGLIMIPVSALEATTLTFVGHNWGRWRRETGRTTVRPRASLQSLYRISRPAFVSVALALAFE VPICILMSLVGVRPFARYISGSDETAVVTERMWRTMDWCYVIFAATTQLSAVLLATRPKLYLWQSLASNLLYVLP WAIACHLAHLDESNAWTYHALVSGGSMVFSLFSVLAVLALWAWVLKTGRARLGAVK* |
| Coding | >Hirsu2|3505 ATGGTCGTCACGACGGACGTATTCACGTACATCGCAACCGTCGCCGAGATCCTCAACGAGGGCCTCCCCCGAGCG GCCTGGTCCACCATCGGCGACCACTCCTCCCGCAGCCGGGTCCAGCGGCTGCGGCTGGCCAAGACGCTGATCCTG ACGCAGGCCGTCCTCGGCCTCGGCATGTCCGTCGTCTTCCTCGGCGCCGCCGACGGCTTCGCCCGGGCCTTCGTC CCCGGCGAGGTGCGCCGGCAGAGCGTCATGTACGTCCGCATCAGCAGCTTCTCGGCCCTCAGCAGCGCGCTCGAG ACGGCCGTCGCGGCGGCGGCCAGGGCGCTGGACCAGCCCGACGTGCCGCTGGCGTTTAGCTGCGTCAAGTTCGCC ACCAACATCGTACTCGACATGCTGCTCATCTCGACCTTTAGAGTCTCGTCCGCCGAGCCGACGGTCAACATGCAG GCCGCCATCCAGCTGGCCTGCAACCTGACCTCTGCCTTCGTCGTCCTCCTCTACTTCTTGCTCTCGAACCGGGGC CGGACAGGAGTGGAGCGGCACGGGAGCACGGCGCCAGCTTTGCCGGCTCTGATGATCTTGCTCCGCCCCGGCATC ACCACCCTCATCGAGTCGGCCGTCCGGAACGCCCTCTACCTCTGGCTGGTGAGCAACATCATCTCCATGGGCGCC ACCTACGCCACCGCCTGGGGCGTCTTCAACACGATCCGCTGGGGCCTCATCATGATACCCGTCTCGGCCCTCGAA GCCACCACCTTGACCTTCGTCGGACACAATTGGGGCCGGTGGCGGCGCGAGACGGGCAGGACCACGGTCCGGCCT CGCGCGAGCCTCCAGTCCCTCTATCGGATCTCGCGCCCGGCCTTCGTGTCCGTTGCCCTGGCGCTCGCCTTCGAG GTCCCCATCTGCATCCTCATGTCCCTCGTGGGCGTCCGCCCCTTCGCCCGCTACATCAGCGGCAGCGACGAGACG GCCGTCGTGACGGAGCGCATGTGGAGGACGATGGACTGGTGCTACGTCATCTTCGCCGCCACGACCCAGCTGTCC GCCGTCCTGCTTGCGACGAGACCCAAGTTGTACCTGTGGCAGAGCCTGGCCAGCAACTTGCTCTACGTCCTGCCC TGGGCCATTGCTTGCCATCTCGCCCATCTGGACGAGAGCAATGCCTGGACGTACCACGCGCTTGTCTCGGGCGGT AGCATGGTCTTCAGCCTCTTCAGTGTGCTCGCCGTCCTGGCCTTGTGGGCCTGGGTGTTGAAGACCGGCAGAGCC CGCCTGGGCGCAGTCAAGTAG |
| Transcript | >Hirsu2|3505 ATGGTCGTCACGACGGACGTATTCACGTACATCGCAACCGTCGCCGAGATCCTCAACGAGGGCCTCCCCCGAGCG GCCTGGTCCACCATCGGCGACCACTCCTCCCGCAGCCGGGTCCAGCGGCTGCGGCTGGCCAAGACGCTGATCCTG ACGCAGGCCGTCCTCGGCCTCGGCATGTCCGTCGTCTTCCTCGGCGCCGCCGACGGCTTCGCCCGGGCCTTCGTC CCCGGCGAGGTGCGCCGGCAGAGCGTCATGTACGTCCGCATCAGCAGCTTCTCGGCCCTCAGCAGCGCGCTCGAG ACGGCCGTCGCGGCGGCGGCCAGGGCGCTGGACCAGCCCGACGTGCCGCTGGCGTTTAGCTGCGTCAAGTTCGCC ACCAACATCGTACTCGACATGCTGCTCATCTCGACCTTTAGAGTCTCGTCCGCCGAGCCGACGGTCAACATGCAG GCCGCCATCCAGCTGGCCTGCAACCTGACCTCTGCCTTCGTCGTCCTCCTCTACTTCTTGCTCTCGAACCGGGGC CGGACAGGAGTGGAGCGGCACGGGAGCACGGCGCCAGCTTTGCCGGCTCTGATGATCTTGCTCCGCCCCGGCATC ACCACCCTCATCGAGTCGGCCGTCCGGAACGCCCTCTACCTCTGGCTGGTGAGCAACATCATCTCCATGGGCGCC ACCTACGCCACCGCCTGGGGCGTCTTCAACACGATCCGCTGGGGCCTCATCATGATACCCGTCTCGGCCCTCGAA GCCACCACCTTGACCTTCGTCGGACACAATTGGGGCCGGTGGCGGCGCGAGACGGGCAGGACCACGGTCCGGCCT CGCGCGAGCCTCCAGTCCCTCTATCGGATCTCGCGCCCGGCCTTCGTGTCCGTTGCCCTGGCGCTCGCCTTCGAG GTCCCCATCTGCATCCTCATGTCCCTCGTGGGCGTCCGCCCCTTCGCCCGCTACATCAGCGGCAGCGACGAGACG GCCGTCGTGACGGAGCGCATGTGGAGGACGATGGACTGGTGCTACGTCATCTTCGCCGCCACGACCCAGCTGTCC GCCGTCCTGCTTGCGACGAGACCCAAGTTGTACCTGTGGCAGAGCCTGGCCAGCAACTTGCTCTACGTCCTGCCC TGGGCCATTGCTTGCCATCTCGCCCATCTGGACGAGAGCAATGCCTGGACGTACCACGCGCTTGTCTCGGGCGGT AGCATGGTCTTCAGCCTCTTCAGTGTGCTCGCCGTCCTGGCCTTGTGGGCCTGGGTGTTGAAGACCGGCAGAGCC CGCCTGGGCGCAGTCAAGTAG |
| Gene | >Hirsu2|3505 ATGGTCGTCACGACGGAGTGAGTGGCTCCGTCGACATCCAGCTCCTCTTCGTGGCACATACGCACGCGGACTGAC AGTCGGCGCCTCAGCGTATTCACGTACATCGCAACCGTCGCCGAGATCCTCAACGAGGGCCTCCCCCGAGCGGCC TGGTCCACCATCGGCGACCACTCCTCCCGCAGCCGGGTCCAGCGGCTGCGGCTGGCCAAGACGCTGATCCTGACG CAGGCCGTCCTCGGCCTCGGCATGTCCGTCGTCTTCCTCGGCGCCGCCGACGGCTTCGCCCGGGCCTTCGTCCCC GGCGAGGTGCGCCGGCAGAGCGTCATGTACGTCCGCATCAGCAGCTTCTCGGCCCTCAGCAGCGCGCTCGAGACG GCCGTCGCGGCGGCGGCCAGGGCGCTGGACCAGCCCGACGTGCCGCTGGCGTTTAGCTGCGTCAAGTTCGCCACC AACATCGTACTCGACATGCTGCTCATCTCGACCTTTAGAGTCTCGTCCGCCGAGCCGACGGTCAACATGCAGGCC GCCATCCAGCTGGCCTGCAACCTGACCTCTGCCTTCGTCGTCCTCCTCTACTTCTTGCTCTCGAACCGGGGCCGG ACAGGAGTGGAGCGGCACGGGAGCACGGCGCCAGCTTTGCCGGCTCTGATGATCTTGCTCCGCCCCGGCATCACC ACCCTCATCGAGTCGGCCGTCCGGAACGCCCTCTACCTCTGGCTGGTGAGCAACATCATCTCCATGGGCGCCACC TACGCCACCGCCTGGGGCGTCTTCAACACGATCCGCTGGGGCCTCATCATGATACCCGTCTCGGCCCTCGAAGCC ACCACCTTGACCTTCGTCGGACACAATTGGGGCCGGTGGCGGCGCGAGACGGGCAGGACCACGGTCCGGCCTCGC GCGAGCCTCCAGTCCCTCTATCGGATCTCGCGCCCGGCCTTCGTGTCCGTTGCCCTGGCGCTCGCCTTCGAGGTC CCCATCTGCATCCTCATGTCCCTCGTGGGCGTCCGCCCCTTCGCCCGCTACATCAGCGGCAGCGACGAGACGGCC GTCGTGACGGAGCGCATGTGGAGGACGATGGACTGGTGCTACGTCATCTTCGCCGCCACGACCCAGCTGTCCGCC GTCCTGCTTGCGACGAGACCCAAGTTGTACCTGTGGCAGAGCCTGGCCAGCAACTTGCTCTACGTCCTGCCCTGG GCCATTGCTTGCCATCTCGCCCATCTGGACGAGAGCAATGCCTGGACGTACCACGCGCTTGTCTCGGGCGGTAGC ATGGTCTTCAGCCTCTTCAGTGTGCTCGCCGTCCTGGCCTTGTGGGCCTGGGTGTTGAAGACCGGCAGAGCCCGC CTGGGCGCAGTCAAGTAG |