© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3500 |
| Gene name | |
| Location | Contig_1918:2680..3478 |
| Strand | + |
| Gene length (bp) | 798 |
| Transcript length (bp) | 798 |
| Coding sequence length (bp) | 798 |
| Protein length (aa) | 266 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear export signal | 0.6042 | 0.7485 | 0.0828 | 0.0308 | 0.1197 | 0.0068 | 0.0433 | 0.1587 | 0.1328 | 0.1401 |
| Orthofinder run ID | 4 |
| Orthogroup | 2449 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3500 MTYVNLSRRDFNVLEKIKDPESNPAAGVVIDETLPRDPHIADAGVYERVVESERAVIRTIQAIETQLGQSHAEDS QTTATEGYRRCLGDLDRLVSSQPQYASARNNRAQVLRRLYGDAMLLDITTGLPMPLVEQPERTERRRAALTALED LERSIVLLSPASANAPLSRQAARTLSMAHTQRAAIYLRTSKMMSHRRLDVEERRPEAQWSKLDFEEAAARDLAYG GRYGNQIAKGLAVSVNPTAKLCGQIVREAMKKEYGPSCEA* |
| Coding | >Hirsu2|3500 ATGACCTACGTCAACTTGAGTAGACGAGACTTCAACGTGCTCGAGAAGATCAAGGATCCAGAGTCCAATCCGGCC GCGGGCGTCGTCATCGACGAGACGCTGCCTCGCGACCCGCACATCGCGGACGCGGGCGTGTACGAGAGGGTCGTC GAGAGCGAGCGTGCCGTCATCCGAACCATCCAGGCCATCGAGACGCAACTTGGCCAGTCCCACGCCGAGGACTCC CAGACGACCGCGACCGAGGGCTACCGACGATGCCTTGGCGACCTGGACCGGCTCGTATCATCACAGCCCCAGTAC GCCAGCGCCAGAAACAACCGGGCCCAGGTGCTGAGGCGACTCTACGGGGACGCCATGCTTCTCGACATCACCACC GGCCTGCCCATGCCCCTGGTCGAGCAGCCTGAGCGGACGGAGAGGCGGCGGGCGGCGCTGACGGCCTTGGAGGAT CTGGAGCGCTCCATCGTCCTTCTTTCCCCAGCCTCGGCCAACGCTCCGCTCTCGCGGCAGGCTGCGCGGACACTG TCCATGGCGCACACCCAGCGAGCTGCCATCTACCTCAGGACGTCCAAGATGATGTCGCACAGGAGGCTAGACGTG GAGGAGAGGCGGCCAGAAGCACAATGGTCCAAGCTCGACTTCGAAGAGGCCGCCGCCCGCGACCTGGCGTACGGC GGTCGATACGGCAACCAGATTGCCAAGGGCCTGGCCGTGAGCGTCAACCCGACGGCCAAGCTCTGTGGACAGATC GTTCGAGAGGCCATGAAGAAGGAGTACGGGCCATCATGCGAGGCCTGA |
| Transcript | >Hirsu2|3500 ATGACCTACGTCAACTTGAGTAGACGAGACTTCAACGTGCTCGAGAAGATCAAGGATCCAGAGTCCAATCCGGCC GCGGGCGTCGTCATCGACGAGACGCTGCCTCGCGACCCGCACATCGCGGACGCGGGCGTGTACGAGAGGGTCGTC GAGAGCGAGCGTGCCGTCATCCGAACCATCCAGGCCATCGAGACGCAACTTGGCCAGTCCCACGCCGAGGACTCC CAGACGACCGCGACCGAGGGCTACCGACGATGCCTTGGCGACCTGGACCGGCTCGTATCATCACAGCCCCAGTAC GCCAGCGCCAGAAACAACCGGGCCCAGGTGCTGAGGCGACTCTACGGGGACGCCATGCTTCTCGACATCACCACC GGCCTGCCCATGCCCCTGGTCGAGCAGCCTGAGCGGACGGAGAGGCGGCGGGCGGCGCTGACGGCCTTGGAGGAT CTGGAGCGCTCCATCGTCCTTCTTTCCCCAGCCTCGGCCAACGCTCCGCTCTCGCGGCAGGCTGCGCGGACACTG TCCATGGCGCACACCCAGCGAGCTGCCATCTACCTCAGGACGTCCAAGATGATGTCGCACAGGAGGCTAGACGTG GAGGAGAGGCGGCCAGAAGCACAATGGTCCAAGCTCGACTTCGAAGAGGCCGCCGCCCGCGACCTGGCGTACGGC GGTCGATACGGCAACCAGATTGCCAAGGGCCTGGCCGTGAGCGTCAACCCGACGGCCAAGCTCTGTGGACAGATC GTTCGAGAGGCCATGAAGAAGGAGTACGGGCCATCATGCGAGGCCTGA |
| Gene | >Hirsu2|3500 ATGACCTACGTCAACTTGAGTAGACGAGACTTCAACGTGCTCGAGAAGATCAAGGATCCAGAGTCCAATCCGGCC GCGGGCGTCGTCATCGACGAGACGCTGCCTCGCGACCCGCACATCGCGGACGCGGGCGTGTACGAGAGGGTCGTC GAGAGCGAGCGTGCCGTCATCCGAACCATCCAGGCCATCGAGACGCAACTTGGCCAGTCCCACGCCGAGGACTCC CAGACGACCGCGACCGAGGGCTACCGACGATGCCTTGGCGACCTGGACCGGCTCGTATCATCACAGCCCCAGTAC GCCAGCGCCAGAAACAACCGGGCCCAGGTGCTGAGGCGACTCTACGGGGACGCCATGCTTCTCGACATCACCACC GGCCTGCCCATGCCCCTGGTCGAGCAGCCTGAGCGGACGGAGAGGCGGCGGGCGGCGCTGACGGCCTTGGAGGAT CTGGAGCGCTCCATCGTCCTTCTTTCCCCAGCCTCGGCCAACGCTCCGCTCTCGCGGCAGGCTGCGCGGACACTG TCCATGGCGCACACCCAGCGAGCTGCCATCTACCTCAGGACGTCCAAGATGATGTCGCACAGGAGGCTAGACGTG GAGGAGAGGCGGCCAGAAGCACAATGGTCCAAGCTCGACTTCGAAGAGGCCGCCGCCCGCGACCTGGCGTACGGC GGTCGATACGGCAACCAGATTGCCAAGGGCCTGGCCGTGAGCGTCAACCCGACGGCCAAGCTCTGTGGACAGATC GTTCGAGAGGCCATGAAGAAGGAGTACGGGCCATCATGCGAGGCCTGA |