© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3495 |
| Gene name | |
| Location | Contig_1915:3826..4357 |
| Strand | + |
| Gene length (bp) | 531 |
| Transcript length (bp) | 531 |
| Coding sequence length (bp) | 531 |
| Protein length (aa) | 177 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.6355 | 0.5131 | 0.2386 | 0.1655 | 0.2043 | 0.1244 | 0.1328 | 0.1511 | 0.1187 | 0.0104 |
| Orthofinder run ID | 4 |
| Orthogroup | 9363 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3495 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3495 MASTTACPAADRGPYSSAAEDWPQAGGPPSSGPSIGQPPQARPTDGVDRLAAWPMRAGPRCSTAFPPFPTPAEPV NRGEAGITTSIVMAPPSLPHQLTHSPSLTLSLSLSLSLSFSRGFRANGWLHGTDMAPPNLARKPPVLCLAFCSPV GRAANREARHGEAQPLHRYPRARQRD* |
| Coding | >Hirsu2|3495 ATGGCGAGCACGACAGCCTGCCCGGCCGCCGACCGGGGTCCGTATTCGTCGGCGGCCGAGGACTGGCCGCAAGCG GGCGGACCGCCGTCGTCCGGGCCGTCGATTGGACAGCCACCACAAGCCCGGCCGACGGACGGGGTCGATCGACTG GCTGCCTGGCCGATGCGGGCCGGGCCACGATGCTCGACAGCCTTCCCCCCCTTCCCCACTCCGGCCGAGCCAGTC AATAGGGGCGAGGCCGGCATCACCACCAGCATCGTCATGGCCCCGCCCTCTTTGCCTCACCAACTCACTCACTCT CCTTCACTCACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTCGCGGGGCTTCCGTGCCAACGGCTGGCTC CACGGCACCGACATGGCGCCGCCCAACTTGGCGCGGAAGCCGCCCGTCCTGTGTCTGGCTTTCTGCTCTCCCGTT GGTCGTGCAGCCAACAGAGAGGCACGGCATGGCGAGGCACAGCCGCTGCACCGCTACCCACGCGCACGGCAGAGA GACTAG |
| Transcript | >Hirsu2|3495 ATGGCGAGCACGACAGCCTGCCCGGCCGCCGACCGGGGTCCGTATTCGTCGGCGGCCGAGGACTGGCCGCAAGCG GGCGGACCGCCGTCGTCCGGGCCGTCGATTGGACAGCCACCACAAGCCCGGCCGACGGACGGGGTCGATCGACTG GCTGCCTGGCCGATGCGGGCCGGGCCACGATGCTCGACAGCCTTCCCCCCCTTCCCCACTCCGGCCGAGCCAGTC AATAGGGGCGAGGCCGGCATCACCACCAGCATCGTCATGGCCCCGCCCTCTTTGCCTCACCAACTCACTCACTCT CCTTCACTCACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTCGCGGGGCTTCCGTGCCAACGGCTGGCTC CACGGCACCGACATGGCGCCGCCCAACTTGGCGCGGAAGCCGCCCGTCCTGTGTCTGGCTTTCTGCTCTCCCGTT GGTCGTGCAGCCAACAGAGAGGCACGGCATGGCGAGGCACAGCCGCTGCACCGCTACCCACGCGCACGGCAGAGA GACTAG |
| Gene | >Hirsu2|3495 ATGGCGAGCACGACAGCCTGCCCGGCCGCCGACCGGGGTCCGTATTCGTCGGCGGCCGAGGACTGGCCGCAAGCG GGCGGACCGCCGTCGTCCGGGCCGTCGATTGGACAGCCACCACAAGCCCGGCCGACGGACGGGGTCGATCGACTG GCTGCCTGGCCGATGCGGGCCGGGCCACGATGCTCGACAGCCTTCCCCCCCTTCCCCACTCCGGCCGAGCCAGTC AATAGGGGCGAGGCCGGCATCACCACCAGCATCGTCATGGCCCCGCCCTCTTTGCCTCACCAACTCACTCACTCT CCTTCACTCACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTCGCGGGGCTTCCGTGCCAACGGCTGGCTC CACGGCACCGACATGGCGCCGCCCAACTTGGCGCGGAAGCCGCCCGTCCTGTGTCTGGCTTTCTGCTCTCCCGTT GGTCGTGCAGCCAACAGAGAGGCACGGCATGGCGAGGCACAGCCGCTGCACCGCTACCCACGCGCACGGCAGAGA GACTAG |