© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3494 |
| Gene name | |
| Location | Contig_1915:436..2433 |
| Strand | - |
| Gene length (bp) | 1997 |
| Transcript length (bp) | 1545 |
| Coding sequence length (bp) | 1545 |
| Protein length (aa) | 515 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | 0.4351 | 0.5175 | 0.3263 | 0.0994 | 0.3161 | 0.0195 | 0.2562 | 0.1703 | 0.1521 | 0.0095 |
| Orthofinder run ID | 4 |
| Orthogroup | 9362 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3494 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3494 MASPVLCSALPREYPAATSPVPPASRPAPVDACTFFFSPLSPPLSLSLTLXXXXXXXXXXXXXXXXXXXPPPPLS ALAGLLAGHVTAGRVQKQRVRCVLTLRPQGPSTHRHPALPAAAAAAAAAAACAHPPVSSYSPVLARRAQPPVPAR SSTGSGPAQRAACHPGGPPASAARTPPGPPVFFFSHPPRAHALAHTPPPVCARARRPLPANHVAEKRSTCLPPRL TPPRPQLTRPFLCLSLLVCPPRALAGTCRLPACLTPSSSPAKYSHASSHASSHTPSAQPNLPFLVHRISPPPPAK LGSRHHRQPPGRSRLFLLHPLLSLLHTHSRLPPLSDALLEHQPSSLSRGLASRPHLDLFARRLFVIGRLLPCLSL PPRRADKVRLTPAAEKKKREEEEGDGGDDNNNNNDDDGDDGDDDGDDDDGGDDDEPCLVTPYARRPTRRPTRRLP ERARTHRKRRLLSLVRHRPEAISDAPSPPGAPPSLSTSPSPPPLPPGLLSPDGRPAHPRLARLA* |
| Coding | >Hirsu2|3494 ATGGCCTCGCCTGTGCTCTGCTCGGCGCTGCCCCGCGAGTACCCGGCCGCTACCTCGCCCGTCCCGCCCGCCTCC CGCCCAGCGCCTGTAGACGCCTGTACCTTCTTCTTCTCCCCGCTCTCTCCTCCGCTCTCACTCTCTCTCACACTC TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTCTCT GCCTTGGCCGGCCTTCTGGCGGGTCACGTCACGGCAGGCCGGGTGCAAAAGCAACGAGTGCGTTGCGTGCTGACG CTACGCCCACAGGGGCCCTCCACCCACCGCCACCCAGCCTTGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC GCTTGCGCGCATCCACCGGTCAGCAGCTACTCGCCGGTACTCGCCCGCCGTGCACAGCCACCCGTGCCCGCCAGG TCTTCCACAGGTTCCGGCCCGGCCCAGCGCGCAGCCTGCCACCCCGGGGGCCCGCCCGCCTCGGCTGCCCGCACG CCCCCCGGGCCGCCCGTCTTTTTCTTCAGCCACCCCCCGCGCGCACACGCACTCGCACACACCCCGCCCCCGGTC TGCGCCCGCGCTAGAAGACCGCTGCCTGCAAACCACGTCGCTGAAAAGAGGTCTACATGCCTTCCTCCCCGGCTT ACACCCCCCCGTCCCCAGCTCACACGCCCCTTCCTCTGCCTCTCCCTCCTCGTCTGCCCTCCTCGTGCTCTTGCC GGTACTTGTCGTCTACCTGCCTGCCTTACACCTTCCTCCTCGCCCGCCAAGTACTCTCACGCCTCCTCTCACGCC TCCTCTCACACCCCCTCTGCCCAACCCAATCTTCCTTTCCTCGTCCACCGCATCTCCCCTCCTCCACCAGCAAAA CTCGGATCGCGACATCATCGTCAGCCGCCGGGCCGCTCCAGACTCTTCCTCCTCCATCCTCTCCTTTCCCTCCTC CACACTCACTCTCGCCTGCCGCCCCTCTCCGACGCCCTCCTCGAGCATCAGCCGAGCTCTTTGTCCCGAGGCCTC GCCTCTCGTCCCCACCTTGACCTCTTTGCTCGACGTCTCTTCGTCATCGGCCGCCTGCTCCCTTGCCTTTCTTTG CCTCCGCGCCGAGCCGACAAAGTCCGACTTACACCAGCGGCGGAAAAAAAAAAAAGGGAAGAAGAAGAAGGCGAC GGCGGCGACGACAACAACAACAACAACGACGACGACGGCGACGACGGCGACGACGACGGCGACGACGACGACGGC GGCGACGACGACGAGCCCTGCCTCGTCACTCCTTACGCCCGCCGCCCGACCAGGCGACCAACTCGCCGGCTTCCA GAGCGCGCGCGCACTCACCGCAAACGTCGCCTCCTCTCCCTCGTCCGCCACCGCCCAGAAGCCATCTCCGATGCG CCCTCGCCGCCTGGCGCCCCGCCCAGCCTGAGTACGAGTCCATCGCCGCCACCTCTCCCGCCCGGCCTGCTGTCC CCCGACGGCCGACCTGCCCACCCCAGGCTCGCTCGACTGGCATAG |
| Transcript | >Hirsu2|3494 ATGGCCTCGCCTGTGCTCTGCTCGGCGCTGCCCCGCGAGTACCCGGCCGCTACCTCGCCCGTCCCGCCCGCCTCC CGCCCAGCGCCTGTAGACGCCTGTACCTTCTTCTTCTCCCCGCTCTCTCCTCCGCTCTCACTCTCTCTCACACTC TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTCTCT GCCTTGGCCGGCCTTCTGGCGGGTCACGTCACGGCAGGCCGGGTGCAAAAGCAACGAGTGCGTTGCGTGCTGACG CTACGCCCACAGGGGCCCTCCACCCACCGCCACCCAGCCTTGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC GCTTGCGCGCATCCACCGGTCAGCAGCTACTCGCCGGTACTCGCCCGCCGTGCACAGCCACCCGTGCCCGCCAGG TCTTCCACAGGTTCCGGCCCGGCCCAGCGCGCAGCCTGCCACCCCGGGGGCCCGCCCGCCTCGGCTGCCCGCACG CCCCCCGGGCCGCCCGTCTTTTTCTTCAGCCACCCCCCGCGCGCACACGCACTCGCACACACCCCGCCCCCGGTC TGCGCCCGCGCTAGAAGACCGCTGCCTGCAAACCACGTCGCTGAAAAGAGGTCTACATGCCTTCCTCCCCGGCTT ACACCCCCCCGTCCCCAGCTCACACGCCCCTTCCTCTGCCTCTCCCTCCTCGTCTGCCCTCCTCGTGCTCTTGCC GGTACTTGTCGTCTACCTGCCTGCCTTACACCTTCCTCCTCGCCCGCCAAGTACTCTCACGCCTCCTCTCACGCC TCCTCTCACACCCCCTCTGCCCAACCCAATCTTCCTTTCCTCGTCCACCGCATCTCCCCTCCTCCACCAGCAAAA CTCGGATCGCGACATCATCGTCAGCCGCCGGGCCGCTCCAGACTCTTCCTCCTCCATCCTCTCCTTTCCCTCCTC CACACTCACTCTCGCCTGCCGCCCCTCTCCGACGCCCTCCTCGAGCATCAGCCGAGCTCTTTGTCCCGAGGCCTC GCCTCTCGTCCCCACCTTGACCTCTTTGCTCGACGTCTCTTCGTCATCGGCCGCCTGCTCCCTTGCCTTTCTTTG CCTCCGCGCCGAGCCGACAAAGTCCGACTTACACCAGCGGCGGAAAAAAAAAAAAGGGAAGAAGAAGAAGGCGAC GGCGGCGACGACAACAACAACAACAACGACGACGACGGCGACGACGGCGACGACGACGGCGACGACGACGACGGC GGCGACGACGACGAGCCCTGCCTCGTCACTCCTTACGCCCGCCGCCCGACCAGGCGACCAACTCGCCGGCTTCCA GAGCGCGCGCGCACTCACCGCAAACGTCGCCTCCTCTCCCTCGTCCGCCACCGCCCAGAAGCCATCTCCGATGCG CCCTCGCCGCCTGGCGCCCCGCCCAGCCTGAGTACGAGTCCATCGCCGCCACCTCTCCCGCCCGGCCTGCTGTCC CCCGACGGCCGACCTGCCCACCCCAGGCTCGCTCGACTGGCATAG |
| Gene | >Hirsu2|3494 ATGGCCTCGCCTGTGCTCTGCTCGGCGCTGCCCCGCGAGTACCCGGCCGCTACCTCGCCCGTCCCGCCCGCCTCC CGCCCAGCGCCTGTAGACGCCTGTACCTTCTTCTTCTCCCCGCTCTCTCCTCCGCTCTCACTCTCTCTCACACTC TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCTCTCT GCCTTGGCCGGCCTTCTGGCGGGTCACGTCACGGCAGGCCGGGTGCAAAAGCAACGAGTGCGTTGCGTGCTGACG CTACGCCCACAGGGGCCCTCCACCCACCGCCACCCAGCCTTGCCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC GCTTGCGCGCATCCACCGGTCAGCAGCTACTCGCCGGTACTCGCCCGCCGTGCACAGCCACCCGTGCCCGCCAGG TCTTCCACAGGTTCCGGCCCGGCCCAGCGCGCAGCCTGCCACCCCGGGGGCCCGCCCGCCTCGGCTGCCCGCACG CCCCCCGGGCCGCCCGTCTTTTTCTTCAGCCACCCCCCGCGCGCACACGCACTCGCACACACCCCGCCCCCGGTC TGCGCCCGCGCTAGAAGACCGCTGCCTGCAAACCACGTCGCTGAAAAGAGGTCGTCCGTCGTCGCCTTGTCCTCC CCGTGCCTGGGACGGACGAGGACGAGAGACACGACCGGCGCGAGAGAGGGCAGGAAGGGGGCTTGAAGCCGCGGC ACACACAGGCGCGCACACACACGCACACACTCACTCACGTACACACACATGCAACAGGCACAATCTACCTCTAGG CATGTACCTCCACGCACACATACAGCACACGGGTACTTGCTCGCACCGCACGCCCCGCCGAATATTCGACCCCAC CCCCCGCTTCTTCGTCACACGCACACGCTCCCTCCGCTATCCACACCCCCTCCTCCCTCCATCTCTCCTTCCTCG TCGTCGTCACTCCTTCTCTATCCGCCTCGGACCCAAGGCTTCCTTCCCTGTGTGTACCGCCGCCCCTCCACCTCA TGTACCCAGCCAGCCTTGTACTCATGTACACACATACATCCTTACGCACCTCCAGTACATGCCTTCCTCCCCGGC TTACACCCCCCCGTCCCCAGCTCACACGCCCCTTCCTCTGCCTCTCCCTCCTCGTCTGCCCTCCTCGTGCTCTTG CCGGTACTTGTCGTCTACCTGCCTGCCTTACACCTTCCTCCTCGCCCGCCAAGTACTCTCACGCCTCCTCTCACG CCTCCTCTCACACCCCCTCTGCCCAACCCAATCTTCCTTTCCTCGTCCACCGCATCTCCCCTCCTCCACCAGCAA AACTCGGATCGCGACATCATCGTCAGCCGCCGGGCCGCTCCAGACTCTTCCTCCTCCATCCTCTCCTTTCCCTCC TCCACACTCACTCTCGCCTGCCGCCCCTCTCCGACGCCCTCCTCGAGCATCAGCCGAGCTCTTTGTCCCGAGGCC TCGCCTCTCGTCCCCACCTTGACCTCTTTGCTCGACGTCTCTTCGTCATCGGCCGCCTGCTCCCTTGCCTTTCTT TGCCTCCGCGCCGAGCCGACAAAGTCCGACTTACACCAGCGGCGGAAAAAAAAAAAAGGGAAGAAGAAGAAGGCG ACGGCGGCGACGACAACAACAACAACAACGACGACGACGGCGACGACGGCGACGACGACGGCGACGACGACGACG GCGGCGACGACGACGAGCCCTGCCTCGTCACTCCTTACGCCCGCCGCCCGACCAGGCGACCAACTCGCCGGCTTC CAGAGCGCGCGCGCACTCACCGCAAACGTCGCCTCCTCTCCCTCGTCCGCCACCGCCCAGAAGCCATCTCCGATG CGCCCTCGCCGCCTGGCGCCCCGCCCAGCCTGAGTACGAGTCCATCGCCGCCACCTCTCCCGCCCGGCCTGCTGT CCCCCGACGGCCGACCTGCCCACCCCAGGCTCGCTCGACTGGCATAG |