Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3490
Gene name
LocationContig_1913:143..496
Strand-
Gene length (bp)353
Transcript length (bp)282
Coding sequence length (bp)282
Protein length (aa) 94

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|B8NT06|SDHF2_ASPFN Succinate dehydrogenase assembly factor 2, mitochondrial OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=AFLA_051990 PE=3 SV=1 24 66 1.0E-09
sp|Q0CSY3|SDHF2_ASPTN Succinate dehydrogenase assembly factor 2, mitochondrial OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_03201 PE=3 SV=1 29 66 3.0E-08
sp|B6HRA4|SDHF2_PENRW Succinate dehydrogenase assembly factor 2, mitochondrial OS=Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) GN=Pc22g03150 PE=3 SV=1 10 62 4.0E-07

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Mitochondrion Mitochondrial transit peptide 0.2583 0.1386 0.0922 0.0865 0.8968 0.1745 0.0865 0.0788 0.1117 0.1863

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5134
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3600
Ophiocordyceps australis map64 (Brazil) OphauB2|5277
Ophiocordyceps camponoti-floridani Ophcf2|02088
Ophiocordyceps camponoti-rufipedis Ophun1|7126
Ophiocordyceps kimflemingae Ophio5|4597
Ophiocordyceps subramaniannii Hirsu2|3490 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3490
MAARALGPAPARRPALLPLRLFATSGGAPELGVGELRGAAFRVEPLRRTGEDAETTRARLLFAQARHARVGPAAV
DVCGGAPGGHDARAAGAV*
Coding >Hirsu2|3490
ATGGCCGCCCGCGCCCTCGGCCCCGCCCCGGCGCGCCGCCCCGCCCTCCTCCCGCTCCGCCTGTTCGCGACATCG
GGCGGTGCGCCGGAGCTCGGCGTCGGCGAGCTGCGCGGGGCGGCGTTCCGGGTCGAGCCGCTGCGGCGGACGGGC
GAGGACGCGGAGACGACGCGGGCGAGGCTACTCTTCGCGCAAGCGCGGCACGCTCGAGTCGGACCTGCTGCTGTC
GACGTTTGCGGCGGCGCACCTGGCGGCCATGACGCCCGCGCAGCTGGCGCAGTATGA
Transcript >Hirsu2|3490
ATGGCCGCCCGCGCCCTCGGCCCCGCCCCGGCGCGCCGCCCCGCCCTCCTCCCGCTCCGCCTGTTCGCGACATCG
GGCGGTGCGCCGGAGCTCGGCGTCGGCGAGCTGCGCGGGGCGGCGTTCCGGGTCGAGCCGCTGCGGCGGACGGGC
GAGGACGCGGAGACGACGCGGGCGAGGCTACTCTTCGCGCAAGCGCGGCACGCTCGAGTCGGACCTGCTGCTGTC
GACGTTTGCGGCGGCGCACCTGGCGGCCATGACGCCCGCGCAGCTGGCGCAGTATGA
Gene >Hirsu2|3490
ATGGCCGCCCGCGCCCTCGGCCCCGCCCCGGCGCGCCGCCCCGCCCTCCTCCCGCTCCGCCTGTTCGCGACATCG
GGCGGTGCGCCGGAGCTCGGCGTCGGCGAGCTGCGCGGGGCGGCGTTCCGGGTCGAGCCGCTGCGGCGGACGGGC
GAGGACGCGGAGACGACGCGGGCGAGGCTACTCTGTACGTCTTGTCCTCCTTCTTCCTCACGCCGAGGGCGAGCA
GTCGAGAACTGACAGACGCGGGCAGACCAGTCGCGCAAGCGCGGCACGCTCGAGTCGGACCTGCTGCTGTCGACG
TTTGCGGCGGCGCACCTGGCGGCCATGACGCCCGCGCAGCTGGCGCAGTATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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