Protein ID | Hirsu2|3490 |
Gene name | |
Location | Contig_1913:143..496 |
Strand | - |
Gene length (bp) | 353 |
Transcript length (bp) | 282 |
Coding sequence length (bp) | 282 |
Protein length (aa) | 94 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|B8NT06|SDHF2_ASPFN | Succinate dehydrogenase assembly factor 2, mitochondrial OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=AFLA_051990 PE=3 SV=1 | 24 | 66 | 1.0E-09 |
sp|Q0CSY3|SDHF2_ASPTN | Succinate dehydrogenase assembly factor 2, mitochondrial OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_03201 PE=3 SV=1 | 29 | 66 | 3.0E-08 |
sp|B6HRA4|SDHF2_PENRW | Succinate dehydrogenase assembly factor 2, mitochondrial OS=Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255) GN=Pc22g03150 PE=3 SV=1 | 10 | 62 | 4.0E-07 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Mitochondrion | Mitochondrial transit peptide | 0.2583 | 0.1386 | 0.0922 | 0.0865 | 0.8968 | 0.1745 | 0.0865 | 0.0788 | 0.1117 | 0.1863 |
Orthofinder run ID | 4 |
Orthogroup | 5134 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3490 MAARALGPAPARRPALLPLRLFATSGGAPELGVGELRGAAFRVEPLRRTGEDAETTRARLLFAQARHARVGPAAV DVCGGAPGGHDARAAGAV* |
Coding | >Hirsu2|3490 ATGGCCGCCCGCGCCCTCGGCCCCGCCCCGGCGCGCCGCCCCGCCCTCCTCCCGCTCCGCCTGTTCGCGACATCG GGCGGTGCGCCGGAGCTCGGCGTCGGCGAGCTGCGCGGGGCGGCGTTCCGGGTCGAGCCGCTGCGGCGGACGGGC GAGGACGCGGAGACGACGCGGGCGAGGCTACTCTTCGCGCAAGCGCGGCACGCTCGAGTCGGACCTGCTGCTGTC GACGTTTGCGGCGGCGCACCTGGCGGCCATGACGCCCGCGCAGCTGGCGCAGTATGA |
Transcript | >Hirsu2|3490 ATGGCCGCCCGCGCCCTCGGCCCCGCCCCGGCGCGCCGCCCCGCCCTCCTCCCGCTCCGCCTGTTCGCGACATCG GGCGGTGCGCCGGAGCTCGGCGTCGGCGAGCTGCGCGGGGCGGCGTTCCGGGTCGAGCCGCTGCGGCGGACGGGC GAGGACGCGGAGACGACGCGGGCGAGGCTACTCTTCGCGCAAGCGCGGCACGCTCGAGTCGGACCTGCTGCTGTC GACGTTTGCGGCGGCGCACCTGGCGGCCATGACGCCCGCGCAGCTGGCGCAGTATGA |
Gene | >Hirsu2|3490 ATGGCCGCCCGCGCCCTCGGCCCCGCCCCGGCGCGCCGCCCCGCCCTCCTCCCGCTCCGCCTGTTCGCGACATCG GGCGGTGCGCCGGAGCTCGGCGTCGGCGAGCTGCGCGGGGCGGCGTTCCGGGTCGAGCCGCTGCGGCGGACGGGC GAGGACGCGGAGACGACGCGGGCGAGGCTACTCTGTACGTCTTGTCCTCCTTCTTCCTCACGCCGAGGGCGAGCA GTCGAGAACTGACAGACGCGGGCAGACCAGTCGCGCAAGCGCGGCACGCTCGAGTCGGACCTGCTGCTGTCGACG TTTGCGGCGGCGCACCTGGCGGCCATGACGCCCGCGCAGCTGGCGCAGTATGA |