© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3488 |
| Gene name | |
| Location | Contig_1911:499..3500 |
| Strand | - |
| Gene length (bp) | 3001 |
| Transcript length (bp) | 2925 |
| Coding sequence length (bp) | 2925 |
| Protein length (aa) | 975 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.509 | 0.2855 | 0.1882 | 0.1129 | 0.1613 | 0.0098 | 0.1424 | 0.2209 | 0.2593 | 0.0621 |
| Orthofinder run ID | 4 |
| Orthogroup | 6927 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|10309 |
| Ophiocordyceps subramaniannii | Hirsu2|10310 |
| Ophiocordyceps subramaniannii | Hirsu2|3488 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3488 MEILAIISLAGNILQFAEAGARLAANAAKLYHSASGRLPEHEQLGAGAADVRRLMEAMQGHQGTIKDRELNQLVG RCWEASDELLSLLDGLGLRGADRSLLKSVSRSLQAARRKPRLAELESRLGSIRGQICARLAFLTSKQQDLTLELL SQLHHDVLESLNWKRVALGKVDDLAARVEAAIKDGGADAARRERLLQEFVRQTKEVEQQKHVLDSLYFKKMMARQ SDITDAHNETFKWILTDESGANFVPWLRDDANTDLYWVAGKAGSGKSTLMKFVSRHERTRRLLAAWTGSKRLLVA VHYFWNAGHALQKSQEGLFRTLLCQILSFHPELMPVVIGPEVEDELGGVTRSAWTPAILVKVLKSIAAIDPLPFR LCVFIDGLDEYSGDHRELIGILRTLAGSPDIKICASSRPWLNFLDAFDGKPWKVYLQDLTKSDIRQYVGDNLIMD DRFQELDRRASGSGYAESFVSEIESKAQGVFLWVILVVRSLREGLKNGDYLPELHRRLHELPGDLDAYFKVIFDS IEPVYRLLTARIFKVLAVAGSVPVLLVHYMYQEHARPGFCLSEPACLQEPGERLAEVAVRERRRIIAQCRDLVFV SAKRSEPELLRFSAGFLHRTVKDFVQLRHIDEQLDSQAGAGFDPNLAVAQARLTFIKAQQDCLFHRGEPVTSGET WTPRRPDAEAGGGGGGGGHCHDCHRLAEVGRQLEEMMAQAGAWGYLGDRAVELLDHLERTVGQTPYFRAHSGQCR TFVQYAAHWRAGWYVAAKRDSLGAAEAASVLQGVLRGHAVRSRESSSCFCRRHDPFWLDAQRRPAAQRQSYSRLD VAWLERLLGLRLSPNLVLPSEATVWEDFLAFTRTWPSHALKEPCRALLRHGARTDIDVNVEGQLVPVEDFLERIF EGQELAKVMASLGSRPDGRREAGLECQAGALPASGLVSFAGHEEWTTDGGGEGLGDQARDVYLNWRLPRAVARE* |
| Coding | >Hirsu2|3488 ATGGAGATCCTGGCCATCATCTCCCTGGCCGGCAACATCCTCCAGTTCGCCGAGGCCGGCGCCAGGCTGGCGGCC AACGCGGCCAAGCTCTACCACAGCGCCAGCGGCAGGCTGCCCGAGCACGAACAGCTCGGGGCCGGCGCCGCCGAC GTCAGGCGCCTGATGGAGGCCATGCAGGGCCACCAGGGCACCATCAAGGACCGCGAGCTGAACCAGCTCGTCGGC AGGTGCTGGGAGGCGTCGGACGAGCTGCTCTCCCTCCTCGACGGCCTCGGCCTGCGCGGCGCCGACAGGAGCCTG CTCAAGAGCGTGTCCCGGTCGCTGCAGGCGGCCCGGCGCAAGCCCCGGCTCGCCGAGCTCGAGTCCAGGCTGGGT TCGATCCGCGGCCAGATCTGCGCCAGGCTCGCCTTTCTTACCAGTAAGCAGCAGGACCTGACCCTGGAACTGCTG AGCCAGCTTCACCATGACGTCCTGGAGAGCCTGAACTGGAAGAGGGTGGCGCTCGGCAAGGTCGACGATCTCGCC GCCCGTGTGGAGGCGGCCATCAAGGACGGCGGCGCGGACGCGGCGCGGCGGGAGCGGCTGCTGCAGGAGTTCGTG CGTCAGACCAAGGAGGTGGAGCAGCAGAAACACGTCCTCGACAGCCTGTACTTCAAGAAGATGATGGCGCGGCAG TCGGACATCACGGACGCGCACAACGAGACGTTCAAGTGGATCCTCACCGACGAGTCCGGGGCCAACTTCGTGCCG TGGCTGCGCGACGACGCCAACACCGACCTCTACTGGGTCGCCGGCAAGGCCGGCTCGGGCAAGTCGACGCTCATG AAGTTCGTCTCCCGGCACGAGCGCACGCGGCGGCTGCTGGCGGCCTGGACCGGCTCGAAGCGGCTGCTGGTGGCG GTCCACTACTTCTGGAACGCCGGGCACGCGCTGCAAAAGTCGCAGGAGGGCCTCTTCCGGACCCTGCTGTGCCAG ATCCTGTCCTTCCACCCGGAGCTCATGCCCGTCGTCATCGGGCCCGAGGTCGAGGACGAGCTGGGGGGCGTGACG AGGTCGGCCTGGACGCCGGCCATCCTCGTCAAGGTGTTGAAGTCGATCGCCGCCATCGACCCGCTCCCCTTCCGC CTCTGCGTCTTCATCGACGGGCTGGACGAGTACAGCGGGGACCACCGCGAGCTGATCGGCATCCTGCGGACCCTG GCCGGGTCGCCGGACATCAAGATCTGCGCCTCGAGCCGTCCCTGGCTCAACTTCCTCGACGCCTTCGACGGCAAG CCGTGGAAGGTGTACCTGCAGGACCTGACCAAGAGCGACATCCGGCAGTACGTCGGCGACAACCTCATCATGGAC GACAGGTTCCAGGAGCTCGACAGGCGCGCCTCCGGCAGCGGCTACGCCGAGTCGTTCGTGTCCGAGATCGAGAGC AAGGCCCAGGGCGTCTTCCTCTGGGTCATCCTCGTCGTCCGCTCCCTGCGCGAGGGCCTGAAGAACGGCGACTAC CTGCCGGAGCTGCACCGGCGCCTGCACGAGCTCCCGGGCGACCTGGACGCCTACTTCAAGGTCATCTTCGACAGC ATCGAGCCCGTGTACCGGCTGCTGACGGCCCGCATCTTCAAGGTGCTGGCCGTGGCCGGCTCGGTGCCGGTGCTG CTGGTGCACTACATGTACCAGGAGCACGCGCGGCCCGGCTTCTGCCTCTCGGAGCCGGCGTGCCTGCAGGAGCCG GGCGAGAGGCTGGCGGAGGTGGCGGTGCGGGAGCGGCGCCGCATCATCGCGCAGTGCCGCGACCTGGTCTTCGTC TCGGCCAAGAGGTCGGAGCCGGAGCTGCTGCGCTTCTCGGCCGGCTTCCTGCACAGGACGGTCAAGGACTTCGTC CAGCTGCGGCACATCGACGAGCAGCTCGACAGCCAGGCCGGCGCCGGCTTCGACCCGAACCTGGCCGTGGCCCAG GCGCGGCTCACCTTCATCAAGGCCCAGCAAGACTGCCTCTTCCACCGCGGCGAGCCGGTGACGAGCGGCGAGACG TGGACGCCGCGACGGCCCGACGCCGAGGCCGGCGGCGGCGGCGGCGGCGGCGGGCACTGCCACGACTGCCACCGC CTCGCCGAGGTCGGCCGGCAGCTGGAGGAGATGATGGCGCAGGCCGGCGCGTGGGGGTACCTCGGCGACCGGGCC GTGGAGCTGCTCGACCACCTCGAGCGCACCGTCGGCCAGACGCCCTACTTCAGGGCCCACAGCGGCCAGTGCAGG ACGTTCGTGCAGTACGCCGCTCACTGGCGGGCCGGCTGGTACGTCGCGGCCAAGCGGGACTCGCTCGGCGCGGCC GAGGCGGCCTCGGTGCTGCAGGGCGTCCTCCGCGGCCACGCCGTCCGCAGCAGGGAGTCGAGCAGCTGCTTCTGC CGCCGGCACGACCCGTTCTGGCTCGACGCCCAGCGTCGGCCCGCGGCCCAGCGCCAGTCATACAGCCGCCTGGAC GTCGCCTGGCTGGAGCGGCTGCTGGGCCTGAGGCTCTCGCCGAACCTGGTCCTGCCGTCGGAGGCGACGGTGTGG GAGGACTTCCTCGCCTTCACGAGGACGTGGCCGAGCCACGCGTTGAAGGAGCCGTGCAGGGCGCTGCTGCGGCAC GGCGCCAGGACCGACATTGACGTCAACGTCGAGGGGCAGCTCGTCCCGGTCGAGGACTTTCTGGAAAGGATCTTT GAGGGCCAGGAGCTTGCCAAGGTCATGGCCTCTCTCGGCTCCAGGCCCGACGGGCGGCGAGAGGCCGGGCTCGAG TGCCAGGCCGGTGCGCTCCCGGCCTCGGGCCTCGTGAGCTTTGCCGGCCACGAGGAATGGACGACGGACGGGGGC GGCGAGGGCTTGGGAGACCAGGCACGGGACGTTTACCTGAACTGGCGGCTTCCTCGGGCTGTGGCTAGGGAGTAG |
| Transcript | >Hirsu2|3488 ATGGAGATCCTGGCCATCATCTCCCTGGCCGGCAACATCCTCCAGTTCGCCGAGGCCGGCGCCAGGCTGGCGGCC AACGCGGCCAAGCTCTACCACAGCGCCAGCGGCAGGCTGCCCGAGCACGAACAGCTCGGGGCCGGCGCCGCCGAC GTCAGGCGCCTGATGGAGGCCATGCAGGGCCACCAGGGCACCATCAAGGACCGCGAGCTGAACCAGCTCGTCGGC AGGTGCTGGGAGGCGTCGGACGAGCTGCTCTCCCTCCTCGACGGCCTCGGCCTGCGCGGCGCCGACAGGAGCCTG CTCAAGAGCGTGTCCCGGTCGCTGCAGGCGGCCCGGCGCAAGCCCCGGCTCGCCGAGCTCGAGTCCAGGCTGGGT TCGATCCGCGGCCAGATCTGCGCCAGGCTCGCCTTTCTTACCAGTAAGCAGCAGGACCTGACCCTGGAACTGCTG AGCCAGCTTCACCATGACGTCCTGGAGAGCCTGAACTGGAAGAGGGTGGCGCTCGGCAAGGTCGACGATCTCGCC GCCCGTGTGGAGGCGGCCATCAAGGACGGCGGCGCGGACGCGGCGCGGCGGGAGCGGCTGCTGCAGGAGTTCGTG CGTCAGACCAAGGAGGTGGAGCAGCAGAAACACGTCCTCGACAGCCTGTACTTCAAGAAGATGATGGCGCGGCAG TCGGACATCACGGACGCGCACAACGAGACGTTCAAGTGGATCCTCACCGACGAGTCCGGGGCCAACTTCGTGCCG TGGCTGCGCGACGACGCCAACACCGACCTCTACTGGGTCGCCGGCAAGGCCGGCTCGGGCAAGTCGACGCTCATG AAGTTCGTCTCCCGGCACGAGCGCACGCGGCGGCTGCTGGCGGCCTGGACCGGCTCGAAGCGGCTGCTGGTGGCG GTCCACTACTTCTGGAACGCCGGGCACGCGCTGCAAAAGTCGCAGGAGGGCCTCTTCCGGACCCTGCTGTGCCAG ATCCTGTCCTTCCACCCGGAGCTCATGCCCGTCGTCATCGGGCCCGAGGTCGAGGACGAGCTGGGGGGCGTGACG AGGTCGGCCTGGACGCCGGCCATCCTCGTCAAGGTGTTGAAGTCGATCGCCGCCATCGACCCGCTCCCCTTCCGC CTCTGCGTCTTCATCGACGGGCTGGACGAGTACAGCGGGGACCACCGCGAGCTGATCGGCATCCTGCGGACCCTG GCCGGGTCGCCGGACATCAAGATCTGCGCCTCGAGCCGTCCCTGGCTCAACTTCCTCGACGCCTTCGACGGCAAG CCGTGGAAGGTGTACCTGCAGGACCTGACCAAGAGCGACATCCGGCAGTACGTCGGCGACAACCTCATCATGGAC GACAGGTTCCAGGAGCTCGACAGGCGCGCCTCCGGCAGCGGCTACGCCGAGTCGTTCGTGTCCGAGATCGAGAGC AAGGCCCAGGGCGTCTTCCTCTGGGTCATCCTCGTCGTCCGCTCCCTGCGCGAGGGCCTGAAGAACGGCGACTAC CTGCCGGAGCTGCACCGGCGCCTGCACGAGCTCCCGGGCGACCTGGACGCCTACTTCAAGGTCATCTTCGACAGC ATCGAGCCCGTGTACCGGCTGCTGACGGCCCGCATCTTCAAGGTGCTGGCCGTGGCCGGCTCGGTGCCGGTGCTG CTGGTGCACTACATGTACCAGGAGCACGCGCGGCCCGGCTTCTGCCTCTCGGAGCCGGCGTGCCTGCAGGAGCCG GGCGAGAGGCTGGCGGAGGTGGCGGTGCGGGAGCGGCGCCGCATCATCGCGCAGTGCCGCGACCTGGTCTTCGTC TCGGCCAAGAGGTCGGAGCCGGAGCTGCTGCGCTTCTCGGCCGGCTTCCTGCACAGGACGGTCAAGGACTTCGTC CAGCTGCGGCACATCGACGAGCAGCTCGACAGCCAGGCCGGCGCCGGCTTCGACCCGAACCTGGCCGTGGCCCAG GCGCGGCTCACCTTCATCAAGGCCCAGCAAGACTGCCTCTTCCACCGCGGCGAGCCGGTGACGAGCGGCGAGACG TGGACGCCGCGACGGCCCGACGCCGAGGCCGGCGGCGGCGGCGGCGGCGGCGGGCACTGCCACGACTGCCACCGC CTCGCCGAGGTCGGCCGGCAGCTGGAGGAGATGATGGCGCAGGCCGGCGCGTGGGGGTACCTCGGCGACCGGGCC GTGGAGCTGCTCGACCACCTCGAGCGCACCGTCGGCCAGACGCCCTACTTCAGGGCCCACAGCGGCCAGTGCAGG ACGTTCGTGCAGTACGCCGCTCACTGGCGGGCCGGCTGGTACGTCGCGGCCAAGCGGGACTCGCTCGGCGCGGCC GAGGCGGCCTCGGTGCTGCAGGGCGTCCTCCGCGGCCACGCCGTCCGCAGCAGGGAGTCGAGCAGCTGCTTCTGC CGCCGGCACGACCCGTTCTGGCTCGACGCCCAGCGTCGGCCCGCGGCCCAGCGCCAGTCATACAGCCGCCTGGAC GTCGCCTGGCTGGAGCGGCTGCTGGGCCTGAGGCTCTCGCCGAACCTGGTCCTGCCGTCGGAGGCGACGGTGTGG GAGGACTTCCTCGCCTTCACGAGGACGTGGCCGAGCCACGCGTTGAAGGAGCCGTGCAGGGCGCTGCTGCGGCAC GGCGCCAGGACCGACATTGACGTCAACGTCGAGGGGCAGCTCGTCCCGGTCGAGGACTTTCTGGAAAGGATCTTT GAGGGCCAGGAGCTTGCCAAGGTCATGGCCTCTCTCGGCTCCAGGCCCGACGGGCGGCGAGAGGCCGGGCTCGAG TGCCAGGCCGGTGCGCTCCCGGCCTCGGGCCTCGTGAGCTTTGCCGGCCACGAGGAATGGACGACGGACGGGGGC GGCGAGGGCTTGGGAGACCAGGCACGGGACGTTTACCTGAACTGGCGGCTTCCTCGGGCTGTGGCTAGGGAGTAG |
| Gene | >Hirsu2|3488 ATGGAGATCCTGGCCATCATCTCCCTGGCCGGCAACATCCTCCAGTTCGCCGAGGCCGGCGCCAGGCTGGCGGCC AACGCGGCCAAGCTCTACCACAGCGCCAGCGGCAGGCTGCCCGAGCACGAACAGCTCGGGGCCGGCGCCGCCGAC GTCAGGCGCCTGATGGAGGCCATGCAGGGCCACCAGGGCACCATCAAGGACCGCGAGCTGAACCAGCTCGTCGGC AGGTGCTGGGAGGCGTCGGACGAGCTGCTCTCCCTCCTCGACGGCCTCGGCCTGCGCGGCGCCGACAGGAGCCTG CTCAAGAGCGTGTCCCGGTCGCTGCAGGCGGCCCGGCGCAAGCCCCGGCTCGCCGAGCTCGAGTCCAGGCTGGGT TCGATCCGCGGCCAGATCTGCGCCAGGCTCGCCTTTCTTACCAGGTGGGCCCCGTCTTCAATGCCGTCGTCCGTG ACTCTCCCCCCCTCCCCCCACCCCTGAACTGACGGACGCCCGCAGTAAGCAGCAGGACCTGACCCTGGAACTGCT GAGCCAGCTTCACCATGACGTCCTGGAGAGCCTGAACTGGAAGAGGGTGGCGCTCGGCAAGGTCGACGATCTCGC CGCCCGTGTGGAGGCGGCCATCAAGGACGGCGGCGCGGACGCGGCGCGGCGGGAGCGGCTGCTGCAGGAGTTCGT GCGTCAGACCAAGGAGGTGGAGCAGCAGAAACACGTCCTCGACAGCCTGTACTTCAAGAAGATGATGGCGCGGCA GTCGGACATCACGGACGCGCACAACGAGACGTTCAAGTGGATCCTCACCGACGAGTCCGGGGCCAACTTCGTGCC GTGGCTGCGCGACGACGCCAACACCGACCTCTACTGGGTCGCCGGCAAGGCCGGCTCGGGCAAGTCGACGCTCAT GAAGTTCGTCTCCCGGCACGAGCGCACGCGGCGGCTGCTGGCGGCCTGGACCGGCTCGAAGCGGCTGCTGGTGGC GGTCCACTACTTCTGGAACGCCGGGCACGCGCTGCAAAAGTCGCAGGAGGGCCTCTTCCGGACCCTGCTGTGCCA GATCCTGTCCTTCCACCCGGAGCTCATGCCCGTCGTCATCGGGCCCGAGGTCGAGGACGAGCTGGGGGGCGTGAC GAGGTCGGCCTGGACGCCGGCCATCCTCGTCAAGGTGTTGAAGTCGATCGCCGCCATCGACCCGCTCCCCTTCCG CCTCTGCGTCTTCATCGACGGGCTGGACGAGTACAGCGGGGACCACCGCGAGCTGATCGGCATCCTGCGGACCCT GGCCGGGTCGCCGGACATCAAGATCTGCGCCTCGAGCCGTCCCTGGCTCAACTTCCTCGACGCCTTCGACGGCAA GCCGTGGAAGGTGTACCTGCAGGACCTGACCAAGAGCGACATCCGGCAGTACGTCGGCGACAACCTCATCATGGA CGACAGGTTCCAGGAGCTCGACAGGCGCGCCTCCGGCAGCGGCTACGCCGAGTCGTTCGTGTCCGAGATCGAGAG CAAGGCCCAGGGCGTCTTCCTCTGGGTCATCCTCGTCGTCCGCTCCCTGCGCGAGGGCCTGAAGAACGGCGACTA CCTGCCGGAGCTGCACCGGCGCCTGCACGAGCTCCCGGGCGACCTGGACGCCTACTTCAAGGTCATCTTCGACAG CATCGAGCCCGTGTACCGGCTGCTGACGGCCCGCATCTTCAAGGTGCTGGCCGTGGCCGGCTCGGTGCCGGTGCT GCTGGTGCACTACATGTACCAGGAGCACGCGCGGCCCGGCTTCTGCCTCTCGGAGCCGGCGTGCCTGCAGGAGCC GGGCGAGAGGCTGGCGGAGGTGGCGGTGCGGGAGCGGCGCCGCATCATCGCGCAGTGCCGCGACCTGGTCTTCGT CTCGGCCAAGAGGTCGGAGCCGGAGCTGCTGCGCTTCTCGGCCGGCTTCCTGCACAGGACGGTCAAGGACTTCGT CCAGCTGCGGCACATCGACGAGCAGCTCGACAGCCAGGCCGGCGCCGGCTTCGACCCGAACCTGGCCGTGGCCCA GGCGCGGCTCACCTTCATCAAGGCCCAGCAAGACTGCCTCTTCCACCGCGGCGAGCCGGTGACGAGCGGCGAGAC GTGGACGCCGCGACGGCCCGACGCCGAGGCCGGCGGCGGCGGCGGCGGCGGCGGGCACTGCCACGACTGCCACCG CCTCGCCGAGGTCGGCCGGCAGCTGGAGGAGATGATGGCGCAGGCCGGCGCGTGGGGGTACCTCGGCGACCGGGC CGTGGAGCTGCTCGACCACCTCGAGCGCACCGTCGGCCAGACGCCCTACTTCAGGGCCCACAGCGGCCAGTGCAG GACGTTCGTGCAGTACGCCGCTCACTGGCGGGCCGGCTGGTACGTCGCGGCCAAGCGGGACTCGCTCGGCGCGGC CGAGGCGGCCTCGGTGCTGCAGGGCGTCCTCCGCGGCCACGCCGTCCGCAGCAGGGAGTCGAGCAGCTGCTTCTG CCGCCGGCACGACCCGTTCTGGCTCGACGCCCAGCGTCGGCCCGCGGCCCAGCGCCAGTCATACAGCCGCCTGGA CGTCGCCTGGCTGGAGCGGCTGCTGGGCCTGAGGCTCTCGCCGAACCTGGTCCTGCCGTCGGAGGCGACGGTGTG GGAGGACTTCCTCGCCTTCACGAGGACGTGGCCGAGCCACGCGTTGAAGGAGCCGTGCAGGGCGCTGCTGCGGCA CGGCGCCAGGACCGACATTGACGTCAACGTCGAGGGGCAGCTCGTCCCGGTCGAGGACTTTCTGGAAAGGATCTT TGAGGGCCAGGAGCTTGCCAAGGTCATGGCCTCTCTCGGCTCCAGGCCCGACGGGCGGCGAGAGGCCGGGCTCGA GTGCCAGGCCGGTGCGCTCCCGGCCTCGGGCCTCGTGAGCTTTGCCGGCCACGAGGAATGGACGACGGACGGGGG CGGCGAGGGCTTGGGAGACCAGGCACGGGACGTTTACCTGAACTGGCGGCTTCCTCGGGCTGTGGCTAGGGAGTA G |