Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3487
Gene name
LocationContig_1910:328..1131
Strand+
Gene length (bp)803
Transcript length (bp)582
Coding sequence length (bp)582
Protein length (aa) 194

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 7.1E-08 47 94

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.5976 0.7639 0.1088 0.0316 0.0825 0.0121 0.0712 0.1457 0.0851 0.086

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup799
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3351
Ophiocordyceps australis 1348a (Ghana) OphauG2|3352
Ophiocordyceps australis map64 (Brazil) OphauB2|2524
Ophiocordyceps camponoti-floridani Ophcf2|04303
Ophiocordyceps camponoti-rufipedis Ophun1|2120
Ophiocordyceps kimflemingae Ophio5|1398
Ophiocordyceps subramaniannii Hirsu2|3487 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3487
MNKSGRQYDEGPPASIASGFEDQDGQENNTVNQVLAEDVNGSDQEFYSVSQILAERQFNGAIKYLVEWEDYSLHE
ATWEPPEHLEQDTISEWEEFKTTSGRRTARGFRVEDWKTAVQQHNQGERARQEELNRERLFNALEDFEEPDDQGV
LFVDQKQAEPDPMAPTDEQGTLYALSGEHGLHHQEGATAKVDD*
Coding >Hirsu2|3487
ATGAACAAATCGGGGCGGCAGTATGACGAAGGACCGCCCGCGTCTATCGCATCTGGCTTCGAAGACCAAGACGGC
CAGGAAAATAACACTGTCAACCAAGTACTCGCAGAAGATGTCAACGGGAGCGACCAAGAATTCTACAGCGTCAGC
CAGATCCTCGCTGAGAGACAATTCAATGGAGCGATCAAGTATCTGGTCGAATGGGAAGATTATTCTTTGCACGAG
GCGACTTGGGAGCCGCCGGAACATCTTGAACAGGATACCATCTCCGAGTGGGAAGAGTTCAAGACGACAAGCGGC
CGACGAACGGCTCGAGGATTTAGAGTCGAAGACTGGAAAACAGCCGTTCAGCAGCACAACCAAGGGGAGCGGGCT
CGGCAGGAAGAGCTGAACCGCGAGAGACTCTTTAATGCTCTTGAAGACTTTGAGGAGCCTGACGACCAAGGCGTT
CTGTTTGTGGACCAAAAACAAGCGGAGCCCGACCCAATGGCACCAACTGATGAGCAGGGCACACTATATGCCTTG
AGCGGCGAGCATGGGCTTCACCACCAAGAAGGCGCCACGGCCAAGGTCGACGATTGA
Transcript >Hirsu2|3487
ATGAACAAATCGGGGCGGCAGTATGACGAAGGACCGCCCGCGTCTATCGCATCTGGCTTCGAAGACCAAGACGGC
CAGGAAAATAACACTGTCAACCAAGTACTCGCAGAAGATGTCAACGGGAGCGACCAAGAATTCTACAGCGTCAGC
CAGATCCTCGCTGAGAGACAATTCAATGGAGCGATCAAGTATCTGGTCGAATGGGAAGATTATTCTTTGCACGAG
GCGACTTGGGAGCCGCCGGAACATCTTGAACAGGATACCATCTCCGAGTGGGAAGAGTTCAAGACGACAAGCGGC
CGACGAACGGCTCGAGGATTTAGAGTCGAAGACTGGAAAACAGCCGTTCAGCAGCACAACCAAGGGGAGCGGGCT
CGGCAGGAAGAGCTGAACCGCGAGAGACTCTTTAATGCTCTTGAAGACTTTGAGGAGCCTGACGACCAAGGCGTT
CTGTTTGTGGACCAAAAACAAGCGGAGCCCGACCCAATGGCACCAACTGATGAGCAGGGCACACTATATGCCTTG
AGCGGCGAGCATGGGCTTCACCACCAAGAAGGCGCCACGGCCAAGGTCGACGATTGA
Gene >Hirsu2|3487
ATGAACAAATCGGGGCGGCAGTATGACGAAGGACCGCCCGCGTCTATCGCATCTGGCTTCGAAGACCAAGACGGC
CAGGAAAATAACACTGTCAACCAAGTACTCGCAGAAGATGTCAACGGGAGCGACCAAGAATTCTACAGCGTCAGC
CAGATCCTCGCTGAGAGACAATTCAATGGAGCGATCAAGTATCTGGTCGAATGGGAAGATTATTCTTTGCACGAG
GCGACTTGGGAGCCGCCGGAACATCTTGAACAGGATACCATCTCCGAGTGGGAAGAGTTCAAGACGACAAGCGGC
CGACGAACGGCTCGAGGATTTAGAGTCGAAGACTGGAAAACAGCCGTTCAGCAGCACAACCAAGGGGAGCGGGCT
CGGCAGGAAGAGCTGAACCGCGAGAGACTCTTTAATGGTCTGCCACCTGAGTACCTCGACAAATTTTTGGAAGAT
CTTTTTAACACTGCCGATCTAGCTCTTGAAGACTTTGAGGAGCCTGACGACCAAGGCGTTCTGTTTGTGGACCAA
AAACAAGCGGAGCCCGACCCAATGGCACCAACTGATGAGCAGGGCACACTATATGCCTTGAGCGGCGAGCATGGG
CTTCACCACCAAGAAGGCGCCACGGTAGTGGGCAGTAAATTACATGAAAGGACGGACAGTATCCCCGTGGCCCGA
CGTTCTACAAAGAGGAAGGTCGACGAAGAGAATGTGGAATCTCCGGCACAGAAGACACTCAGTGCGAGCGAGGAA
ATAAGAAAACGGCCAAACCCCAGTAAAGCAAGTAGGCCAAGGTCGACGATTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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