© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3485 |
| Gene name | |
| Location | Contig_191:24057..24577 |
| Strand | + |
| Gene length (bp) | 520 |
| Transcript length (bp) | 447 |
| Coding sequence length (bp) | 447 |
| Protein length (aa) | 149 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.5478 | 0.4867 | 0.2991 | 0.0965 | 0.2597 | 0.0177 | 0.0785 | 0.1516 | 0.1322 | 0.1157 |
| Orthofinder run ID | 4 |
| Orthogroup | 9361 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3485 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3485 MNIEHGDIKLANKATNLFKRAPSWVPASDRRTAFWTIYMYAHFDQARRKPCISQFTGLLLEQLRLTKERPRLHDA LKLGLPRQFVLKILDSIEVFLVPLSYKMSRKLLQSRFETLDLNPDILRPGNRDSGRDRMPPPFQYCLVDLPAE* |
| Coding | >Hirsu2|3485 ATGAACATCGAACACGGTGACATCAAGTTGGCAAACAAGGCTACCAATCTCTTCAAGCGTGCACCCAGCTGGGTT CCGGCATCCGACCGGCGGACGGCGTTCTGGACCATCTACATGTATGCACATTTCGACCAGGCAAGGCGGAAGCCT TGCATCTCTCAGTTTACCGGCCTTCTACTGGAACAGCTGCGGCTGACCAAGGAAAGGCCAAGGCTTCATGACGCC CTCAAGCTGGGCCTCCCACGGCAATTCGTCCTCAAGATTCTCGACTCTATTGAGGTCTTCCTCGTTCCGCTCTCC TACAAGATGTCGCGCAAGCTCTTGCAGTCGCGCTTCGAGACACTCGACCTGAACCCGGACATCCTCCGCCCCGGC AACCGCGATAGTGGCAGGGATAGGATGCCGCCTCCTTTTCAATACTGCCTCGTCGACCTACCTGCGGAGTGA |
| Transcript | >Hirsu2|3485 ATGAACATCGAACACGGTGACATCAAGTTGGCAAACAAGGCTACCAATCTCTTCAAGCGTGCACCCAGCTGGGTT CCGGCATCCGACCGGCGGACGGCGTTCTGGACCATCTACATGTATGCACATTTCGACCAGGCAAGGCGGAAGCCT TGCATCTCTCAGTTTACCGGCCTTCTACTGGAACAGCTGCGGCTGACCAAGGAAAGGCCAAGGCTTCATGACGCC CTCAAGCTGGGCCTCCCACGGCAATTCGTCCTCAAGATTCTCGACTCTATTGAGGTCTTCCTCGTTCCGCTCTCC TACAAGATGTCGCGCAAGCTCTTGCAGTCGCGCTTCGAGACACTCGACCTGAACCCGGACATCCTCCGCCCCGGC AACCGCGATAGTGGCAGGGATAGGATGCCGCCTCCTTTTCAATACTGCCTCGTCGACCTACCTGCGGAGTGA |
| Gene | >Hirsu2|3485 ATGAACATCGAACACGGTGACATCAAGTTGGCAAACAAGGCTACCAATCTCTTCAAGCGTGCACCCAGCTGGGTT CCGGCATCCGACCGGCGGACGGCGTTCTGGACCATCTACATGTATGCACATTTCGACCAGGCAAGGCGGAAGCCT TGCATCTCTCAGTTTACCGGCCTTCTACTGGAACAGCTGCGGCTGACCAAGGAAAGGCCAAGGCTTCATGACGCC CTCAAGCTGTAAGTCGAGCCCGAGCCAAAAGAATGTCTACGTTGTGTCAGGTTCAATGCCGCGGACTTAATCGCC ATAGAGGGGCCTCCCACGGCAATTCGTCCTCAAGATTCTCGACTCTATTGAGGTCTTCCTCGTTCCGCTCTCCTA CAAGATGTCGCGCAAGCTCTTGCAGTCGCGCTTCGAGACACTCGACCTGAACCCGGACATCCTCCGCCCCGGCAA CCGCGATAGTGGCAGGGATAGGATGCCGCCTCCTTTTCAATACTGCCTCGTCGACCTACCTGCGGAGTGA |