Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3484
Gene name
LocationContig_191:18233..18860
Strand-
Gene length (bp)627
Transcript length (bp)627
Coding sequence length (bp)627
Protein length (aa) 209

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Extracellular Signal peptide 0.4957 0.3034 0.9212 0.1885 0.2573 0.0464 0.1939 0.2232 0.1382 0.0027

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup6103
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|2367
Ophiocordyceps australis 1348a (Ghana) OphauG2|2406
Ophiocordyceps australis map64 (Brazil) OphauB2|5638
Ophiocordyceps camponoti-rufipedis Ophun1|1320
Ophiocordyceps subramaniannii Hirsu2|3484 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3484
MGMLALWADKEGRTLYRYGGEKAYNGNLTNMENRHLWKFSPDGAGGGTWSIQAPLDRQFFDDLKQGTRGASAFCK
GLGVYAGGFRDRSTDWAYEHVTWPNSVPIPGMLTYNAATRAWTNETIPDNSNDSSAHAKAGKFTNGQAVCVTGFG
PNPMVMMLGGWDADLQTIAMYDLITKRWFWQQTAGSVPRSRGNYCAVGVKGPHGTLEM*
Coding >Hirsu2|3484
ATGGGCATGTTAGCACTTTGGGCCGACAAAGAGGGCCGGACACTATATCGCTATGGCGGCGAGAAGGCCTATAAT
GGAAACCTGACCAACATGGAGAATCGCCATCTCTGGAAATTTTCGCCTGATGGGGCGGGCGGCGGGACGTGGTCT
ATTCAGGCGCCCCTGGACCGTCAATTCTTTGACGACTTGAAGCAGGGCACACGCGGCGCGTCCGCCTTCTGCAAG
GGCTTGGGTGTATATGCTGGTGGATTTCGCGACAGGTCGACTGACTGGGCCTACGAGCATGTGACTTGGCCAAAC
TCGGTGCCCATACCCGGCATGTTAACATACAATGCGGCTACGCGCGCCTGGACCAACGAAACAATCCCCGACAAT
TCGAACGACTCTTCTGCACATGCCAAGGCAGGAAAGTTTACCAACGGTCAGGCTGTCTGCGTGACTGGCTTTGGT
CCCAACCCCATGGTGATGATGCTGGGCGGCTGGGATGCAGACCTTCAGACCATTGCCATGTACGACCTAATCACG
AAGCGGTGGTTTTGGCAGCAGACGGCTGGAAGCGTGCCCAGAAGCCGCGGGAACTACTGTGCTGTTGGTGTCAAA
GGCCCTCATGGTACCTTGGAAATGTAA
Transcript >Hirsu2|3484
ATGGGCATGTTAGCACTTTGGGCCGACAAAGAGGGCCGGACACTATATCGCTATGGCGGCGAGAAGGCCTATAAT
GGAAACCTGACCAACATGGAGAATCGCCATCTCTGGAAATTTTCGCCTGATGGGGCGGGCGGCGGGACGTGGTCT
ATTCAGGCGCCCCTGGACCGTCAATTCTTTGACGACTTGAAGCAGGGCACACGCGGCGCGTCCGCCTTCTGCAAG
GGCTTGGGTGTATATGCTGGTGGATTTCGCGACAGGTCGACTGACTGGGCCTACGAGCATGTGACTTGGCCAAAC
TCGGTGCCCATACCCGGCATGTTAACATACAATGCGGCTACGCGCGCCTGGACCAACGAAACAATCCCCGACAAT
TCGAACGACTCTTCTGCACATGCCAAGGCAGGAAAGTTTACCAACGGTCAGGCTGTCTGCGTGACTGGCTTTGGT
CCCAACCCCATGGTGATGATGCTGGGCGGCTGGGATGCAGACCTTCAGACCATTGCCATGTACGACCTAATCACG
AAGCGGTGGTTTTGGCAGCAGACGGCTGGAAGCGTGCCCAGAAGCCGCGGGAACTACTGTGCTGTTGGTGTCAAA
GGCCCTCATGGTACCTTGGAAATGTAA
Gene >Hirsu2|3484
ATGGGCATGTTAGCACTTTGGGCCGACAAAGAGGGCCGGACACTATATCGCTATGGCGGCGAGAAGGCCTATAAT
GGAAACCTGACCAACATGGAGAATCGCCATCTCTGGAAATTTTCGCCTGATGGGGCGGGCGGCGGGACGTGGTCT
ATTCAGGCGCCCCTGGACCGTCAATTCTTTGACGACTTGAAGCAGGGCACACGCGGCGCGTCCGCCTTCTGCAAG
GGCTTGGGTGTATATGCTGGTGGATTTCGCGACAGGTCGACTGACTGGGCCTACGAGCATGTGACTTGGCCAAAC
TCGGTGCCCATACCCGGCATGTTAACATACAATGCGGCTACGCGCGCCTGGACCAACGAAACAATCCCCGACAAT
TCGAACGACTCTTCTGCACATGCCAAGGCAGGAAAGTTTACCAACGGTCAGGCTGTCTGCGTGACTGGCTTTGGT
CCCAACCCCATGGTGATGATGCTGGGCGGCTGGGATGCAGACCTTCAGACCATTGCCATGTACGACCTAATCACG
AAGCGGTGGTTTTGGCAGCAGACGGCTGGAAGCGTGCCCAGAAGCCGCGGGAACTACTGTGCTGTTGGTGTCAAA
GGCCCTCATGGTACCTTGGAAATGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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