Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3480
Gene name
LocationContig_191:4962..5811
Strand+
Gene length (bp)849
Transcript length (bp)849
Coding sequence length (bp)849
Protein length (aa) 283

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20246 DUF6601 Family of unknown function (DUF6601) 5.9E-68 2 227

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Endoplasmic reticulum|Lysosome/Vacuole Signal peptide|Transmembrane domain 0.1082 0.0314 0.1353 0.5451 0.2525 0.0967 0.6371 0.5849 0.6222 0.0177

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 181 203 22
2 216 238 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup798
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|876
Ophiocordyceps australis map64 (Brazil) OphauB2|1463
Ophiocordyceps camponoti-floridani Ophcf2|02782
Ophiocordyceps camponoti-rufipedis Ophun1|4817
Ophiocordyceps kimflemingae Ophio5|8329
Ophiocordyceps subramaniannii Hirsu2|3480 (this protein)
Ophiocordyceps subramaniannii Hirsu2|8260

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3480
MPLHFQVALGRKIVLVDRMDLHLLWGADGKIFIKAMPTFLLSPDFWRNWLGCHDNHGYDSSVSNEATSNSTKVPA
AALGVALGFLYTYACLICSETDFRIANDQHLLPRRSDNSTIKWPVWKELTREVLGNHEADLVHPRFQRAELRLSR
VNIIHRVTRRSPFDSDVSSWNNYSSLFRDNLAWMTAATVFVALVLTAMSVGLATDRLKGNNDFQRASSGFAVFAI
LGLMCAFALVVLTALANLAKDFPGLLKDMLGQSKTLVQSPSQREGARTAEIGSGLEA*
Coding >Hirsu2|3480
ATGCCACTACACTTTCAGGTAGCCCTAGGCCGCAAGATTGTCCTCGTCGACCGAATGGATTTGCACCTTCTCTGG
GGAGCCGACGGGAAAATCTTTATAAAGGCCATGCCGACCTTTCTTCTCAGTCCGGACTTTTGGCGGAACTGGCTA
GGTTGTCACGACAACCACGGCTACGACAGTTCTGTATCAAACGAAGCTACGAGCAACAGCACCAAAGTACCGGCG
GCTGCGCTTGGAGTCGCTCTAGGATTCCTCTATACGTATGCTTGTCTCATATGTTCGGAGACGGACTTCCGTATT
GCCAACGATCAGCATCTCTTACCTCGAAGGTCAGACAACTCGACAATCAAGTGGCCAGTCTGGAAGGAGTTGACA
AGGGAGGTCCTCGGAAACCACGAGGCAGATCTCGTCCACCCACGCTTCCAGCGCGCCGAACTCCGCCTGTCTCGT
GTCAATATTATCCACCGTGTGACTCGCCGATCCCCATTTGACTCAGACGTCAGCAGCTGGAATAACTATAGCAGC
CTCTTCCGAGATAACCTCGCCTGGATGACCGCTGCTACCGTCTTTGTCGCCCTTGTTCTGACGGCGATGAGTGTT
GGCCTTGCCACGGATCGGCTCAAGGGCAATAATGACTTCCAGCGGGCTTCTTCCGGCTTCGCCGTCTTTGCCATC
CTGGGGCTTATGTGCGCGTTCGCTTTGGTGGTCCTGACGGCACTAGCGAATCTCGCCAAAGACTTCCCAGGGCTA
CTCAAGGACATGCTGGGGCAGTCTAAGACTTTGGTCCAGAGCCCGAGCCAACGAGAAGGTGCACGCACTGCAGAA
ATCGGTTCCGGGCTCGAAGCATGA
Transcript >Hirsu2|3480
ATGCCACTACACTTTCAGGTAGCCCTAGGCCGCAAGATTGTCCTCGTCGACCGAATGGATTTGCACCTTCTCTGG
GGAGCCGACGGGAAAATCTTTATAAAGGCCATGCCGACCTTTCTTCTCAGTCCGGACTTTTGGCGGAACTGGCTA
GGTTGTCACGACAACCACGGCTACGACAGTTCTGTATCAAACGAAGCTACGAGCAACAGCACCAAAGTACCGGCG
GCTGCGCTTGGAGTCGCTCTAGGATTCCTCTATACGTATGCTTGTCTCATATGTTCGGAGACGGACTTCCGTATT
GCCAACGATCAGCATCTCTTACCTCGAAGGTCAGACAACTCGACAATCAAGTGGCCAGTCTGGAAGGAGTTGACA
AGGGAGGTCCTCGGAAACCACGAGGCAGATCTCGTCCACCCACGCTTCCAGCGCGCCGAACTCCGCCTGTCTCGT
GTCAATATTATCCACCGTGTGACTCGCCGATCCCCATTTGACTCAGACGTCAGCAGCTGGAATAACTATAGCAGC
CTCTTCCGAGATAACCTCGCCTGGATGACCGCTGCTACCGTCTTTGTCGCCCTTGTTCTGACGGCGATGAGTGTT
GGCCTTGCCACGGATCGGCTCAAGGGCAATAATGACTTCCAGCGGGCTTCTTCCGGCTTCGCCGTCTTTGCCATC
CTGGGGCTTATGTGCGCGTTCGCTTTGGTGGTCCTGACGGCACTAGCGAATCTCGCCAAAGACTTCCCAGGGCTA
CTCAAGGACATGCTGGGGCAGTCTAAGACTTTGGTCCAGAGCCCGAGCCAACGAGAAGGTGCACGCACTGCAGAA
ATCGGTTCCGGGCTCGAAGCATGA
Gene >Hirsu2|3480
ATGCCACTACACTTTCAGGTAGCCCTAGGCCGCAAGATTGTCCTCGTCGACCGAATGGATTTGCACCTTCTCTGG
GGAGCCGACGGGAAAATCTTTATAAAGGCCATGCCGACCTTTCTTCTCAGTCCGGACTTTTGGCGGAACTGGCTA
GGTTGTCACGACAACCACGGCTACGACAGTTCTGTATCAAACGAAGCTACGAGCAACAGCACCAAAGTACCGGCG
GCTGCGCTTGGAGTCGCTCTAGGATTCCTCTATACGTATGCTTGTCTCATATGTTCGGAGACGGACTTCCGTATT
GCCAACGATCAGCATCTCTTACCTCGAAGGTCAGACAACTCGACAATCAAGTGGCCAGTCTGGAAGGAGTTGACA
AGGGAGGTCCTCGGAAACCACGAGGCAGATCTCGTCCACCCACGCTTCCAGCGCGCCGAACTCCGCCTGTCTCGT
GTCAATATTATCCACCGTGTGACTCGCCGATCCCCATTTGACTCAGACGTCAGCAGCTGGAATAACTATAGCAGC
CTCTTCCGAGATAACCTCGCCTGGATGACCGCTGCTACCGTCTTTGTCGCCCTTGTTCTGACGGCGATGAGTGTT
GGCCTTGCCACGGATCGGCTCAAGGGCAATAATGACTTCCAGCGGGCTTCTTCCGGCTTCGCCGTCTTTGCCATC
CTGGGGCTTATGTGCGCGTTCGCTTTGGTGGTCCTGACGGCACTAGCGAATCTCGCCAAAGACTTCCCAGGGCTA
CTCAAGGACATGCTGGGGCAGTCTAAGACTTTGGTCCAGAGCCCGAGCCAACGAGAAGGTGCACGCACTGCAGAA
ATCGGTTCCGGGCTCGAAGCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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