Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3474
Gene name
LocationContig_1908:887..1317
Strand-
Gene length (bp)430
Transcript length (bp)306
Coding sequence length (bp)306
Protein length (aa) 102

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.4683 0.4877 0.7464 0.1132 0.2812 0.0828 0.1497 0.0642 0.2265 0.0161

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2441
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis map64 (Brazil) OphauB2|5414
Ophiocordyceps australis map64 (Brazil) OphauB2|6908
Ophiocordyceps camponoti-floridani Ophcf2|02983
Ophiocordyceps camponoti-rufipedis Ophun1|5324
Ophiocordyceps kimflemingae Ophio5|7335
Ophiocordyceps subramaniannii Hirsu2|3474 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3474
MASACASCHKTPPEVSLKWPSPPKGLERGIANPFSHLEAGTWLHNRFEKDVYGLLIDAYRLRMEDNHNMEGDADE
DSIYGGPACCRRGETPRRRPTARCSA*
Coding >Hirsu2|3474
ATGGCGTCCGCCTGCGCCAGTTGCCACAAGACGCCACCCGAGGTCAGCCTCAAGTGGCCGTCGCCGCCCAAGGGC
CTGGAACGCGGCATCGCCAACCCCTTCAGCCACCTTGAGGCCGGCACCTGGCTGCACAATCGTTTCGAGAAGGAC
GTCTACGGGCTGCTGATCGACGCCTACCGGCTCCGCATGGAGGACAACCACAACATGGAGGGCGACGCCGACGAG
GACAGCATCTACGGCGGCCCGGCCTGCTGCCGCCGTGGTGAGACGCCCAGAAGACGGCCGACTGCGAGGTGCTCG
GCATGA
Transcript >Hirsu2|3474
ATGGCGTCCGCCTGCGCCAGTTGCCACAAGACGCCACCCGAGGTCAGCCTCAAGTGGCCGTCGCCGCCCAAGGGC
CTGGAACGCGGCATCGCCAACCCCTTCAGCCACCTTGAGGCCGGCACCTGGCTGCACAATCGTTTCGAGAAGGAC
GTCTACGGGCTGCTGATCGACGCCTACCGGCTCCGCATGGAGGACAACCACAACATGGAGGGCGACGCCGACGAG
GACAGCATCTACGGCGGCCCGGCCTGCTGCCGCCGTGGTGAGACGCCCAGAAGACGGCCGACTGCGAGGTGCTCG
GCATGA
Gene >Hirsu2|3474
ATGGCGTCCGCCTGCGCCAGTTGCCACAAGACGCCACCCGAGGTCAGCCTCAAGTGGTGCGCGAAATGCTCGACG
ACGCCATACTGCTCCAAGGAATGCCAAAAAGGCCGGCTGGAAGGCCCACAAGAAGATCAGGTAAGCGGACGCGCG
GACGTCGTCGTCGGCGGGCGCCAACGCAAGGCCGTCGCCGCCCAAGGGCCTGGAACGCGGCATCGCCAACCCCTT
CAGCCACCTTGAGGCCGGCACCTGGCTGCACAATCGTTTCGAGAAGGACGTCTACGGGCTGCTGATCGACGCCTA
CCGGCTCCGCATGGAGGACAACCACAACATGGAGGGCGACGCCGACGAGGACAGCATCTACGGCGGCCCGGCCTG
CTGCCGCCGTGGTGAGACGCCCAGAAGACGGCCGACTGCGAGGTGCTCGGCATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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