Protein ID | Hirsu2|3474 |
Gene name | |
Location | Contig_1908:887..1317 |
Strand | - |
Gene length (bp) | 430 |
Transcript length (bp) | 306 |
Coding sequence length (bp) | 306 |
Protein length (aa) | 102 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.4683 | 0.4877 | 0.7464 | 0.1132 | 0.2812 | 0.0828 | 0.1497 | 0.0642 | 0.2265 | 0.0161 |
Orthofinder run ID | 4 |
Orthogroup | 2441 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3474 MASACASCHKTPPEVSLKWPSPPKGLERGIANPFSHLEAGTWLHNRFEKDVYGLLIDAYRLRMEDNHNMEGDADE DSIYGGPACCRRGETPRRRPTARCSA* |
Coding | >Hirsu2|3474 ATGGCGTCCGCCTGCGCCAGTTGCCACAAGACGCCACCCGAGGTCAGCCTCAAGTGGCCGTCGCCGCCCAAGGGC CTGGAACGCGGCATCGCCAACCCCTTCAGCCACCTTGAGGCCGGCACCTGGCTGCACAATCGTTTCGAGAAGGAC GTCTACGGGCTGCTGATCGACGCCTACCGGCTCCGCATGGAGGACAACCACAACATGGAGGGCGACGCCGACGAG GACAGCATCTACGGCGGCCCGGCCTGCTGCCGCCGTGGTGAGACGCCCAGAAGACGGCCGACTGCGAGGTGCTCG GCATGA |
Transcript | >Hirsu2|3474 ATGGCGTCCGCCTGCGCCAGTTGCCACAAGACGCCACCCGAGGTCAGCCTCAAGTGGCCGTCGCCGCCCAAGGGC CTGGAACGCGGCATCGCCAACCCCTTCAGCCACCTTGAGGCCGGCACCTGGCTGCACAATCGTTTCGAGAAGGAC GTCTACGGGCTGCTGATCGACGCCTACCGGCTCCGCATGGAGGACAACCACAACATGGAGGGCGACGCCGACGAG GACAGCATCTACGGCGGCCCGGCCTGCTGCCGCCGTGGTGAGACGCCCAGAAGACGGCCGACTGCGAGGTGCTCG GCATGA |
Gene | >Hirsu2|3474 ATGGCGTCCGCCTGCGCCAGTTGCCACAAGACGCCACCCGAGGTCAGCCTCAAGTGGTGCGCGAAATGCTCGACG ACGCCATACTGCTCCAAGGAATGCCAAAAAGGCCGGCTGGAAGGCCCACAAGAAGATCAGGTAAGCGGACGCGCG GACGTCGTCGTCGGCGGGCGCCAACGCAAGGCCGTCGCCGCCCAAGGGCCTGGAACGCGGCATCGCCAACCCCTT CAGCCACCTTGAGGCCGGCACCTGGCTGCACAATCGTTTCGAGAAGGACGTCTACGGGCTGCTGATCGACGCCTA CCGGCTCCGCATGGAGGACAACCACAACATGGAGGGCGACGCCGACGAGGACAGCATCTACGGCGGCCCGGCCTG CTGCCGCCGTGGTGAGACGCCCAGAAGACGGCCGACTGCGAGGTGCTCGGCATGA |