Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3469
Gene name
Location	Contig_1905:347..2296
Strand	+
Gene length (bp)	1949
Transcript length (bp)	1731
Coding sequence length (bp)	1731
Protein length (aa)	577

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04935	SURF6	Surfeit locus protein 6	1.4E-47	356	546
PF15459	RRP14	60S ribosome biogenesis protein Rrp14	9.0E-18	9	59

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P36080\|RRP14_YEAST	Ribosomal RNA-processing protein 14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP14 PE=1 SV=1	415	569	7.0E-18
sp\|O43082\|RR14C_SCHPO	Ribosomal RNA-processing protein 14-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp14c PE=1 SV=1	327	535	1.0E-13
sp\|Q9VDS6\|SURF6_DROME	Surfeit locus protein 6 homolog OS=Drosophila melanogaster GN=Surf6 PE=1 SV=1	439	542	5.0E-13
sp\|P36080\|RRP14_YEAST	Ribosomal RNA-processing protein 14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP14 PE=1 SV=1	5	59	9.0E-11
sp\|P70279\|SURF6_MOUSE	Surfeit locus protein 6 OS=Mus musculus GN=Surf6 PE=1 SV=1	451	555	3.0E-07

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P36080\|RRP14_YEAST	Ribosomal RNA-processing protein 14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP14 PE=1 SV=1	415	569	7.0E-18
sp\|O43082\|RR14C_SCHPO	Ribosomal RNA-processing protein 14-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp14c PE=1 SV=1	327	535	1.0E-13
sp\|Q9VDS6\|SURF6_DROME	Surfeit locus protein 6 homolog OS=Drosophila melanogaster GN=Surf6 PE=1 SV=1	439	542	5.0E-13
sp\|P36080\|RRP14_YEAST	Ribosomal RNA-processing protein 14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP14 PE=1 SV=1	5	59	9.0E-11
sp\|P70279\|SURF6_MOUSE	Surfeit locus protein 6 OS=Mus musculus GN=Surf6 PE=1 SV=1	451	555	3.0E-07
sp\|O14279\|RR14N_SCHPO	Ribosomal RNA-processing protein 14-N OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rrp14n PE=1 SV=1	6	63	2.0E-06
sp\|O57594\|SURF6_TAKRU	Surfeit locus protein 6 homolog OS=Takifugu rubripes GN=surf6 PE=3 SV=1	459	543	2.0E-06
sp\|Q54G38\|SURF6_DICDI	Surfeit locus protein 6 homolog OS=Dictyostelium discoideum GN=surf6 PE=3 SV=1	469	542	9.0E-06

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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Nucleus	Nuclear localization signal	0.2425	0.8604	0.0475	0.011	0.0405	0.0057	0.0465	0.007	0.0145	0.0008

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	2438
Change Orthofinder run

Species	Protein ID
Ophiocordyceps australis 1348a (Ghana)	OphauG2\|1162
Ophiocordyceps australis map64 (Brazil)	OphauB2\|2621
Ophiocordyceps camponoti-floridani	Ophcf2\|03211
Ophiocordyceps camponoti-rufipedis	Ophun1\|4923
Ophiocordyceps kimflemingae	Ophio5\|173
Ophiocordyceps subramaniannii	Hirsu2\|3469 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3469 MPEASLQDRLRDHAKAFDGLLSLIPAKMYYGEDTSDQWKRKKQTKQEAAAARRAKLDPDSELNRNAKEVMDERAN NKRKLRELQQEDDQEEAADDDGSGDGAIKHQDDEPSEAVAGIATEKPGEGLRKKAAKKQRLQGRDAEDENQDGAD GPGPAESPTKLSRKEETRAAKREKKAEKKAESKANRAQEWAVPGAGDDIPTVEQPLKNPTSNKEPSRKKASSSST PLKCRPPPFSTDSSNASSAEKDSIEDVISCDVPASSPSRAEHSRSSASESECPSPTFDTDQPTAPALGAAGEVAS ATTSVSSVVPASEKPKHIKIPADTTALRARLAAKIEALRAARKADGPDGKPIRTRQELIEARRAKQAQRKAHKKE LRKQSKLEEARRREEALASNSPGVMSPSVELDESTGNFSFGRVVFGDGSQMSHDLSYVLQQGKRKGPSDPKTALL KVQNQKKRLEELDGEKRADVADKEAWLTARRRVEGDKIRDDEAMLKKAVKRKETAKKKSEKAWQERARGIEQAQK DRQKKREENIKKRREDKVLGKAGKKKKGGPAKKVGGRPGFEGSFGVGGRKK*
Coding	>Hirsu2\|3469 ATGCCCGAGGCATCTTTGCAGGATCGCCTACGCGATCATGCAAAAGCCTTCGATGGGCTCCTGAGCTTGATCCCG GCCAAGATGTATTACGGCGAAGACACCAGCGATCAGTGGAAGCGTAAGAAACAAACAAAACAAGAGGCGGCCGCT GCTCGCAGGGCAAAACTCGATCCGGACAGCGAGCTTAACCGCAACGCAAAGGAAGTCATGGACGAACGAGCCAAT AACAAGCGGAAGCTCCGCGAACTGCAACAGGAGGACGACCAAGAGGAGGCCGCCGACGATGACGGGAGCGGAGAT GGAGCCATCAAGCACCAGGATGACGAGCCCAGCGAGGCAGTAGCAGGGATTGCCACCGAAAAGCCTGGAGAGGGT CTGAGAAAAAAGGCTGCCAAAAAGCAGAGGCTACAAGGGCGAGATGCCGAGGATGAGAACCAAGATGGGGCGGAC GGGCCCGGCCCCGCCGAGTCTCCGACAAAGCTGTCCAGGAAAGAAGAGACGAGGGCAGCCAAAAGGGAGAAGAAA GCCGAGAAGAAGGCGGAAAGCAAGGCAAATAGGGCACAAGAGTGGGCAGTACCCGGAGCTGGCGATGACATCCCA ACAGTCGAACAGCCCCTCAAGAATCCGACCAGCAACAAAGAGCCGTCGAGGAAAAAGGCCAGTAGCAGTTCCACA CCCCTGAAATGTCGACCACCGCCGTTCTCCACCGACTCGTCAAATGCGAGCTCAGCGGAGAAAGACTCGATCGAA GATGTCATCTCCTGTGACGTGCCCGCCTCATCGCCCAGCCGCGCAGAGCACAGCAGGTCGTCCGCCTCCGAGTCA GAATGCCCGTCACCGACATTCGACACAGATCAGCCGACAGCTCCTGCCTTGGGCGCCGCGGGAGAAGTTGCGAGC GCCACGACCTCGGTCTCCTCCGTCGTCCCTGCGTCCGAGAAGCCCAAGCATATCAAGATTCCGGCCGATACCACC GCTTTGCGAGCACGGCTTGCCGCCAAGATCGAGGCCCTCCGAGCGGCCAGGAAAGCTGACGGTCCGGACGGGAAG CCCATCCGCACCCGGCAGGAGCTTATAGAAGCCAGACGGGCGAAGCAGGCACAGCGAAAGGCGCACAAGAAGGAG CTCAGGAAGCAGTCCAAGTTGGAGGAGGCGCGCAGGCGTGAGGAGGCGCTGGCGTCCAACTCGCCCGGAGTGATG AGTCCTTCGGTGGAATTGGACGAGTCGACGGGCAACTTTTCGTTCGGCCGGGTCGTGTTCGGAGACGGCTCGCAG ATGTCGCATGACCTCAGCTATGTGCTGCAGCAGGGCAAGAGGAAGGGACCGTCGGATCCCAAGACGGCCCTCCTC AAGGTGCAGAACCAAAAGAAGCGGCTGGAGGAGCTTGACGGCGAGAAGCGGGCCGATGTCGCAGACAAGGAGGCG TGGCTGACAGCGAGACGCCGGGTCGAGGGCGATAAGATACGGGATGATGAAGCTATGCTCAAGAAGGCCGTGAAG CGTAAGGAGACGGCCAAGAAGAAGAGTGAGAAGGCGTGGCAAGAGCGCGCCAGGGGGATTGAGCAGGCACAAAAG GATCGGCAGAAGAAGCGCGAGGAGAACATTAAGAAGCGAAGGGAGGACAAGGTTCTCGGCAAGGCAGGGAAGAAA AAGAAGGGCGGGCCGGCGAAGAAGGTAGGCGGCCGTCCCGGCTTTGAGGGCAGCTTTGGCGTCGGCGGCCGCAAG AAGTGA
Transcript	>Hirsu2\|3469 ATGCCCGAGGCATCTTTGCAGGATCGCCTACGCGATCATGCAAAAGCCTTCGATGGGCTCCTGAGCTTGATCCCG GCCAAGATGTATTACGGCGAAGACACCAGCGATCAGTGGAAGCGTAAGAAACAAACAAAACAAGAGGCGGCCGCT GCTCGCAGGGCAAAACTCGATCCGGACAGCGAGCTTAACCGCAACGCAAAGGAAGTCATGGACGAACGAGCCAAT AACAAGCGGAAGCTCCGCGAACTGCAACAGGAGGACGACCAAGAGGAGGCCGCCGACGATGACGGGAGCGGAGAT GGAGCCATCAAGCACCAGGATGACGAGCCCAGCGAGGCAGTAGCAGGGATTGCCACCGAAAAGCCTGGAGAGGGT CTGAGAAAAAAGGCTGCCAAAAAGCAGAGGCTACAAGGGCGAGATGCCGAGGATGAGAACCAAGATGGGGCGGAC GGGCCCGGCCCCGCCGAGTCTCCGACAAAGCTGTCCAGGAAAGAAGAGACGAGGGCAGCCAAAAGGGAGAAGAAA GCCGAGAAGAAGGCGGAAAGCAAGGCAAATAGGGCACAAGAGTGGGCAGTACCCGGAGCTGGCGATGACATCCCA ACAGTCGAACAGCCCCTCAAGAATCCGACCAGCAACAAAGAGCCGTCGAGGAAAAAGGCCAGTAGCAGTTCCACA CCCCTGAAATGTCGACCACCGCCGTTCTCCACCGACTCGTCAAATGCGAGCTCAGCGGAGAAAGACTCGATCGAA GATGTCATCTCCTGTGACGTGCCCGCCTCATCGCCCAGCCGCGCAGAGCACAGCAGGTCGTCCGCCTCCGAGTCA GAATGCCCGTCACCGACATTCGACACAGATCAGCCGACAGCTCCTGCCTTGGGCGCCGCGGGAGAAGTTGCGAGC GCCACGACCTCGGTCTCCTCCGTCGTCCCTGCGTCCGAGAAGCCCAAGCATATCAAGATTCCGGCCGATACCACC GCTTTGCGAGCACGGCTTGCCGCCAAGATCGAGGCCCTCCGAGCGGCCAGGAAAGCTGACGGTCCGGACGGGAAG CCCATCCGCACCCGGCAGGAGCTTATAGAAGCCAGACGGGCGAAGCAGGCACAGCGAAAGGCGCACAAGAAGGAG CTCAGGAAGCAGTCCAAGTTGGAGGAGGCGCGCAGGCGTGAGGAGGCGCTGGCGTCCAACTCGCCCGGAGTGATG AGTCCTTCGGTGGAATTGGACGAGTCGACGGGCAACTTTTCGTTCGGCCGGGTCGTGTTCGGAGACGGCTCGCAG ATGTCGCATGACCTCAGCTATGTGCTGCAGCAGGGCAAGAGGAAGGGACCGTCGGATCCCAAGACGGCCCTCCTC AAGGTGCAGAACCAAAAGAAGCGGCTGGAGGAGCTTGACGGCGAGAAGCGGGCCGATGTCGCAGACAAGGAGGCG TGGCTGACAGCGAGACGCCGGGTCGAGGGCGATAAGATACGGGATGATGAAGCTATGCTCAAGAAGGCCGTGAAG CGTAAGGAGACGGCCAAGAAGAAGAGTGAGAAGGCGTGGCAAGAGCGCGCCAGGGGGATTGAGCAGGCACAAAAG GATCGGCAGAAGAAGCGCGAGGAGAACATTAAGAAGCGAAGGGAGGACAAGGTTCTCGGCAAGGCAGGGAAGAAA AAGAAGGGCGGGCCGGCGAAGAAGGTAGGCGGCCGTCCCGGCTTTGAGGGCAGCTTTGGCGTCGGCGGCCGCAAG AAGTGA
Gene	>Hirsu2\|3469 ATGCCCGAGGCATCTTTGCAGGTTCGTCTGGCAGCCCGCTGCCGTCCCAAGGGACGGCGACATTTCCCTTCACCG CCCAGGGCTGACCAGGATAGGATCGCCTACGCGATCATGCAAAAGCCTTCGATGGGCTCCTGAGCTTGATCCCGG CCAAGATGTATTACGGCGAAGACACCAGCGTACGTTTGACACTCGCCTCTCTCTGCTTCCCCTTCCTATCTGGAC GTCGCCCCGTCCGCACCAGAATTATGACGTTGGCTTTCGCACTCTACAGAGCAAACCCGAGGCTCGGGCCATGTG CATTATAGCTCACGGTCGCCTAGGATCAGTGGAAGCGTAAGAAACAAACAAAACAAGAGGCGGCCGCTGCTCGCA GGGCAAAACTCGATCCGGACAGCGAGCTTAACCGCAACGCAAAGGAAGTCATGGACGAACGAGCCAATAACAAGC GGAAGCTCCGCGAACTGCAACAGGAGGACGACCAAGAGGAGGCCGCCGACGATGACGGGAGCGGAGATGGAGCCA TCAAGCACCAGGATGACGAGCCCAGCGAGGCAGTAGCAGGGATTGCCACCGAAAAGCCTGGAGAGGGTCTGAGAA AAAAGGCTGCCAAAAAGCAGAGGCTACAAGGGCGAGATGCCGAGGATGAGAACCAAGATGGGGCGGACGGGCCCG GCCCCGCCGAGTCTCCGACAAAGCTGTCCAGGAAAGAAGAGACGAGGGCAGCCAAAAGGGAGAAGAAAGCCGAGA AGAAGGCGGAAAGCAAGGCAAATAGGGCACAAGAGTGGGCAGTACCCGGAGCTGGCGATGACATCCCAACAGTCG AACAGCCCCTCAAGAATCCGACCAGCAACAAAGAGCCGTCGAGGAAAAAGGCCAGTAGCAGTTCCACACCCCTGA AATGTCGACCACCGCCGTTCTCCACCGACTCGTCAAATGCGAGCTCAGCGGAGAAAGACTCGATCGAAGATGTCA TCTCCTGTGACGTGCCCGCCTCATCGCCCAGCCGCGCAGAGCACAGCAGGTCGTCCGCCTCCGAGTCAGAATGCC CGTCACCGACATTCGACACAGATCAGCCGACAGCTCCTGCCTTGGGCGCCGCGGGAGAAGTTGCGAGCGCCACGA CCTCGGTCTCCTCCGTCGTCCCTGCGTCCGAGAAGCCCAAGCATATCAAGATTCCGGCCGATACCACCGCTTTGC GAGCACGGCTTGCCGCCAAGATCGAGGCCCTCCGAGCGGCCAGGAAAGCTGACGGTCCGGACGGGAAGCCCATCC GCACCCGGCAGGAGCTTATAGAAGCCAGACGGGCGAAGCAGGCACAGCGAAAGGCGCACAAGAAGGAGCTCAGGA AGCAGTCCAAGTTGGAGGAGGCGCGCAGGCGTGAGGAGGCGCTGGCGTCCAACTCGCCCGGAGTGATGAGTCCTT CGGTGGAATTGGACGAGTCGACGGGCAACTTTTCGTTCGGCCGGGTCGTGTTCGGAGACGGCTCGCAGATGTCGC ATGACCTCAGCTATGTGCTGCAGCAGGGCAAGAGGAAGGGACCGTCGGATCCCAAGACGGCCCTCCTCAAGGTGC AGAACCAAAAGAAGCGGCTGGAGGAGCTTGACGGCGAGAAGCGGGCCGATGTCGCAGACAAGGAGGCGTGGCTGA CAGCGAGACGCCGGGTCGAGGGCGATAAGATACGGGATGATGAAGCTATGCTCAAGAAGGCCGTGAAGCGTAAGG AGACGGCCAAGAAGAAGAGTGAGAAGGCGTGGCAAGAGCGCGCCAGGGGGATTGAGCAGGCACAAAAGGATCGGC AGAAGAAGCGCGAGGAGAACATTAAGAAGCGAAGGGAGGACAAGGTTCTCGGCAAGGCAGGGAAGAAAAAGAAGG GCGGGCCGGCGAAGAAGGTAGGCGGCCGTCCCGGCTTTGAGGGCAGCTTTGGCGTCGGCGGCCGCAAGAAGTGA

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