Protein ID | Hirsu2|3466 |
Gene name | |
Location | Contig_1904:179..767 |
Strand | + |
Gene length (bp) | 588 |
Transcript length (bp) | 243 |
Coding sequence length (bp) | 243 |
Protein length (aa) | 81 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P38675|MET7_NEUCR | Cystathionine gamma-synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=met-7 PE=3 SV=3 | 1 | 66 | 2.0E-24 |
sp|P47164|MET7_YEAST | Cystathionine gamma-synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STR2 PE=1 SV=1 | 1 | 71 | 5.0E-22 |
sp|O74314|MET7_SCHPO | Probable cystathionine gamma-synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.09c PE=3 SV=1 | 6 | 56 | 2.0E-16 |
sp|Q04533|METX_YEAST | Putative cystathionine gamma-synthase YML082W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML082W PE=1 SV=1 | 6 | 71 | 9.0E-13 |
sp|Q12198|METW_YEAST | Putative cystathionine gamma-synthase YLL058W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL058W PE=1 SV=1 | 1 | 69 | 1.0E-09 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.5442 | 0.4139 | 0.2732 | 0.135 | 0.3984 | 0.1197 | 0.1909 | 0.2439 | 0.2717 | 0.0141 |
Orthofinder run ID | 4 |
Orthogroup | 101 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3466 MTSLALGEAIPPDTAHAVSVSLPTWQSNIGYEEGEEWVTSRMRTGYPRFFIHKSIESLAEAIVASHCQPTYGRRY LKSQS* |
Coding | >Hirsu2|3466 ATGACGTCGCTGGCTTTAGGTGAAGCGATTCCACCGGATACTGCTCATGCTGTAAGCGTATCCTTACCGACGTGG CAGTCGAATATAGGCTATGAAGAGGGCGAGGAATGGGTTACCAGTCGTATGAGGACAGGCTATCCCCGCTTCTTC ATCCACAAAAGCATAGAATCTCTAGCAGAGGCCATTGTAGCGTCCCACTGCCAGCCAACATACGGGCGACGGTAT CTCAAGTCGCAGAGCTGA |
Transcript | >Hirsu2|3466 ATGACGTCGCTGGCTTTAGGTGAAGCGATTCCACCGGATACTGCTCATGCTGTAAGCGTATCCTTACCGACGTGG CAGTCGAATATAGGCTATGAAGAGGGCGAGGAATGGGTTACCAGTCGTATGAGGACAGGCTATCCCCGCTTCTTC ATCCACAAAAGCATAGAATCTCTAGCAGAGGCCATTGTAGCGTCCCACTGCCAGCCAACATACGGGCGACGGTAT CTCAAGTCGCAGAGCTGA |
Gene | >Hirsu2|3466 ATGACGTCGCTGGCTTTAGGTGAAGCGATTCCACCGGATACTGCTCATGTTGGTACTTTCTATTCTTTTGGCGGG GTACTACTTATGTCACTAACTAACTTAACTTCGACCAGGCTGTAAGCGTATCCTTACCGACGTGGCAGTCGAATA TAGGCTATGAAGAGGGCGAGGAATGGGTTACCAGTCGTATGAGGACAGGCTATCCCCGGTATGGTTATGAGCATC GAGGATTCAGCTCCCCATTTTCTCTCATACTAACTGGCTGCTGAGCTTCTTCATCCACAAAAGCATAGAATCTCT AGCAGAGGCCATTGTAGCGTCCCACTGCCAGCCAAGTCTGGTAGCCCTTCTCTTCGCAACGCCTATGGCAGCGAG GCGCTGCATCGATTTCGTTAGGCACCGCACAACCTCGGATGAACCGGGGGTTCTAGACACGATAGAGCTCGTCAC AGATGCTTCGAAATGCCCAACGTTGCTAAAGCAGCTTTCCCCAACCATAACTGCTGCCATTTTCCCTCGACGGGC CTTCGCGCTCGCTAAACAGTACTGGCAGCATACGGGCGACGGTATCTCAAGTCGCAGAGCTGA |