Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3466
Gene name
LocationContig_1904:179..767
Strand+
Gene length (bp)588
Transcript length (bp)243
Coding sequence length (bp)243
Protein length (aa) 81

Overview

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PFAM Domains

(None)

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P38675|MET7_NEUCR Cystathionine gamma-synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=met-7 PE=3 SV=3 1 66 2.0E-24
sp|P47164|MET7_YEAST Cystathionine gamma-synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STR2 PE=1 SV=1 1 71 5.0E-22
sp|O74314|MET7_SCHPO Probable cystathionine gamma-synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC15D4.09c PE=3 SV=1 6 56 2.0E-16
sp|Q04533|METX_YEAST Putative cystathionine gamma-synthase YML082W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML082W PE=1 SV=1 6 71 9.0E-13
sp|Q12198|METW_YEAST Putative cystathionine gamma-synthase YLL058W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL058W PE=1 SV=1 1 69 1.0E-09

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.5442 0.4139 0.2732 0.135 0.3984 0.1197 0.1909 0.2439 0.2717 0.0141

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup101
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6767
Ophiocordyceps australis 1348a (Ghana) OphauG2|1293
Ophiocordyceps australis map64 (Brazil) OphauB2|3854
Ophiocordyceps australis map64 (Brazil) OphauB2|5147
Ophiocordyceps australis map64 (Brazil) OphauB2|5866
Ophiocordyceps camponoti-floridani Ophcf2|02962
Ophiocordyceps camponoti-floridani Ophcf2|00543
Ophiocordyceps camponoti-rufipedis Ophun1|3382
Ophiocordyceps camponoti-rufipedis Ophun1|7291
Ophiocordyceps camponoti-rufipedis Ophun1|6305
Ophiocordyceps kimflemingae Ophio5|6911
Ophiocordyceps kimflemingae Ophio5|7647
Ophiocordyceps kimflemingae Ophio5|919
Ophiocordyceps subramaniannii Hirsu2|6555
Ophiocordyceps subramaniannii Hirsu2|3467
Ophiocordyceps subramaniannii Hirsu2|3466 (this protein)
Ophiocordyceps subramaniannii Hirsu2|316

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3466
MTSLALGEAIPPDTAHAVSVSLPTWQSNIGYEEGEEWVTSRMRTGYPRFFIHKSIESLAEAIVASHCQPTYGRRY
LKSQS*
Coding >Hirsu2|3466
ATGACGTCGCTGGCTTTAGGTGAAGCGATTCCACCGGATACTGCTCATGCTGTAAGCGTATCCTTACCGACGTGG
CAGTCGAATATAGGCTATGAAGAGGGCGAGGAATGGGTTACCAGTCGTATGAGGACAGGCTATCCCCGCTTCTTC
ATCCACAAAAGCATAGAATCTCTAGCAGAGGCCATTGTAGCGTCCCACTGCCAGCCAACATACGGGCGACGGTAT
CTCAAGTCGCAGAGCTGA
Transcript >Hirsu2|3466
ATGACGTCGCTGGCTTTAGGTGAAGCGATTCCACCGGATACTGCTCATGCTGTAAGCGTATCCTTACCGACGTGG
CAGTCGAATATAGGCTATGAAGAGGGCGAGGAATGGGTTACCAGTCGTATGAGGACAGGCTATCCCCGCTTCTTC
ATCCACAAAAGCATAGAATCTCTAGCAGAGGCCATTGTAGCGTCCCACTGCCAGCCAACATACGGGCGACGGTAT
CTCAAGTCGCAGAGCTGA
Gene >Hirsu2|3466
ATGACGTCGCTGGCTTTAGGTGAAGCGATTCCACCGGATACTGCTCATGTTGGTACTTTCTATTCTTTTGGCGGG
GTACTACTTATGTCACTAACTAACTTAACTTCGACCAGGCTGTAAGCGTATCCTTACCGACGTGGCAGTCGAATA
TAGGCTATGAAGAGGGCGAGGAATGGGTTACCAGTCGTATGAGGACAGGCTATCCCCGGTATGGTTATGAGCATC
GAGGATTCAGCTCCCCATTTTCTCTCATACTAACTGGCTGCTGAGCTTCTTCATCCACAAAAGCATAGAATCTCT
AGCAGAGGCCATTGTAGCGTCCCACTGCCAGCCAAGTCTGGTAGCCCTTCTCTTCGCAACGCCTATGGCAGCGAG
GCGCTGCATCGATTTCGTTAGGCACCGCACAACCTCGGATGAACCGGGGGTTCTAGACACGATAGAGCTCGTCAC
AGATGCTTCGAAATGCCCAACGTTGCTAAAGCAGCTTTCCCCAACCATAACTGCTGCCATTTTCCCTCGACGGGC
CTTCGCGCTCGCTAAACAGTACTGGCAGCATACGGGCGACGGTATCTCAAGTCGCAGAGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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