Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3464
Gene name
LocationContig_1903:425..900
Strand-
Gene length (bp)475
Transcript length (bp)246
Coding sequence length (bp)246
Protein length (aa) 82

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm 0.684 0.2711 0.1057 0.3883 0.2385 0.0291 0.2057 0.1794 0.2363 0.0183

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2437
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|3828
Ophiocordyceps australis map64 (Brazil) OphauB2|6763
Ophiocordyceps camponoti-floridani Ophcf2|01277
Ophiocordyceps camponoti-rufipedis Ophun1|2333
Ophiocordyceps kimflemingae Ophio5|1051
Ophiocordyceps subramaniannii Hirsu2|3464 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3464
MARIAEDAAPVEYDPQDPYDAAFGMLSQMLNRMSQNILHPDSEREHRLRASEYERVRVEANLEYARSMLTKLEQD
TSGTWP*
Coding >Hirsu2|3464
ATGGCGCGGATAGCCGAAGACGCTGCCCCGGTCGAATATGACCCACAAGACCCCTACGATGCCGCCTTCGGCATG
CTGTCGCAGATGCTGAACCGGATGTCGCAAAATATCCTCCACCCAGACAGCGAGCGAGAGCACCGGCTGCGGGCC
AGCGAGTACGAGAGAGTCCGAGTCGAAGCGAATCTAGAGTACGCGAGGTCGATGCTCACGAAGCTCGAGCAGGAT
ACTTCCGGCACATGGCCATAG
Transcript >Hirsu2|3464
ATGGCGCGGATAGCCGAAGACGCTGCCCCGGTCGAATATGACCCACAAGACCCCTACGATGCCGCCTTCGGCATG
CTGTCGCAGATGCTGAACCGGATGTCGCAAAATATCCTCCACCCAGACAGCGAGCGAGAGCACCGGCTGCGGGCC
AGCGAGTACGAGAGAGTCCGAGTCGAAGCGAATCTAGAGTACGCGAGGTCGATGCTCACGAAGCTCGAGCAGGAT
ACTTCCGGCACATGGCCATAG
Gene >Hirsu2|3464
ATGGCGCGGATAGCCGAAGACGCTGCCCCGGTCGAATATGACCCACAAGACCCCTACGATGCCGCCTTCGGCATG
CTGTCGCAGATGCTGAACCGGATGTCGCAAAATATCCTCCACCCAGACAGCGAGCGAGAGCACCGGCTGCGGGCC
AGCGAGTACGAGAGAGTCCGAGTCGAAGCGGTGAGCTTGCGCGCGGGCGGCCGCCAATCTCAACGACACGGACGC
TGACGCGGAAGCTCAGAATCTAGAGTACGCGAGGTCGATGCTCACGAAGCTCGAGCAGGATGTGACGGGCATCCA
GCCGCCAGCGCGAAAGCTGCACATGCAAGACGCTCTGCGCGACCGAAGAGTGACGCTGGAGGCGCTTCTGGACCG
GCTGCAAGACTTCCGGCACGTACGTCCTTCCGAACCCCCCGTCTTGCCTGTTCAGCCGGACGTGCCGCTAAGACG
CCCCGCCCCGTACAGATGGCCATAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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