Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3463
Gene name
LocationContig_1902:2654..3725
Strand+
Gene length (bp)1071
Transcript length (bp)960
Coding sequence length (bp)960
Protein length (aa) 320

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Endoplasmic reticulum Transmembrane domain 0.2205 0.1911 0.1044 0.3294 0.4014 0.0208 0.5323 0.3797 0.2793 0.0387

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup2436
Change Orthofinder run
Species Protein ID
Ophiocordyceps camponoti-floridani Ophcf2|05472
Ophiocordyceps camponoti-rufipedis Ophun1|5151
Ophiocordyceps kimflemingae Ophio5|2432
Ophiocordyceps subramaniannii Hirsu2|3463 (this protein)
Ophiocordyceps subramaniannii Hirsu2|949

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3463
MAVMPSLAGLWNRALAELVVYGLLYGAVFRFHTSRTVQVYNQKFRKSTSYHLPVHIATGLFEITRYQVRVARHGE
AAVAPGGGDVVVCLIWAWTSLCLVRSLQRGDPATTRPAYQAGIVLRPLCSLAGFALQSPSLYRVCAKAINSFVYA
RVGIWLVHKSAFLRGQPDSAVYSLCIPVSAILSIHEGRVLGAVPVYVAVMFAIRHLNHWVSTYLGERRNLSAADI
AQQQFKDWFAHMMLGLGFAELDDVRQKRRNRMSLSSDIIDEYIRRQDDGCRSASLASIESDFSDKLHRPWDLYEG
PAAAADDRPLPAVPEAEAR*
Coding >Hirsu2|3463
ATGGCCGTCATGCCGTCCCTGGCCGGACTCTGGAACCGGGCGCTGGCGGAGCTGGTCGTCTACGGGCTGCTGTAC
GGCGCCGTCTTCCGCTTCCACACGAGCCGGACGGTGCAGGTGTACAACCAAAAGTTCCGCAAGTCGACCAGCTAC
CACCTGCCGGTGCACATCGCGACCGGCCTCTTCGAGATCACGCGGTACCAGGTGCGGGTGGCGCGGCACGGCGAG
GCGGCGGTGGCGCCCGGCGGCGGCGACGTCGTCGTCTGCCTCATCTGGGCCTGGACCAGCCTGTGCCTGGTGCGG
TCGCTGCAGCGGGGCGACCCGGCGACGACGCGCCCGGCCTACCAGGCCGGCATCGTGCTGCGGCCGCTGTGCAGC
CTGGCCGGCTTCGCGCTGCAGAGCCCGTCGCTGTACCGCGTCTGCGCCAAGGCCATCAACAGCTTCGTCTACGCC
CGCGTCGGCATCTGGCTCGTCCACAAGTCGGCCTTTCTGCGCGGCCAGCCCGACTCGGCCGTCTACTCGCTCTGC
ATCCCCGTCTCCGCCATCCTCAGCATCCACGAGGGCCGCGTCCTCGGCGCTGTCCCCGTCTACGTCGCCGTCATG
TTCGCCATCCGCCACCTCAACCACTGGGTCTCGACCTACCTGGGCGAGCGCCGCAACCTGTCCGCGGCCGACATC
GCGCAGCAGCAGTTTAAGGACTGGTTCGCGCACATGATGCTGGGCCTCGGCTTCGCCGAGCTCGACGACGTGCGC
CAGAAGCGCCGCAACCGCATGTCGCTCAGCTCCGACATCATCGACGAGTACATCCGCCGCCAGGACGACGGCTGC
CGCTCCGCCAGCCTCGCCAGCATCGAGTCCGACTTCTCCGACAAGCTGCACCGCCCCTGGGACCTGTACGAGGGC
CCGGCCGCCGCCGCCGACGACCGCCCGCTGCCGGCCGTGCCCGAGGCCGAGGCCAGATGA
Transcript >Hirsu2|3463
ATGGCCGTCATGCCGTCCCTGGCCGGACTCTGGAACCGGGCGCTGGCGGAGCTGGTCGTCTACGGGCTGCTGTAC
GGCGCCGTCTTCCGCTTCCACACGAGCCGGACGGTGCAGGTGTACAACCAAAAGTTCCGCAAGTCGACCAGCTAC
CACCTGCCGGTGCACATCGCGACCGGCCTCTTCGAGATCACGCGGTACCAGGTGCGGGTGGCGCGGCACGGCGAG
GCGGCGGTGGCGCCCGGCGGCGGCGACGTCGTCGTCTGCCTCATCTGGGCCTGGACCAGCCTGTGCCTGGTGCGG
TCGCTGCAGCGGGGCGACCCGGCGACGACGCGCCCGGCCTACCAGGCCGGCATCGTGCTGCGGCCGCTGTGCAGC
CTGGCCGGCTTCGCGCTGCAGAGCCCGTCGCTGTACCGCGTCTGCGCCAAGGCCATCAACAGCTTCGTCTACGCC
CGCGTCGGCATCTGGCTCGTCCACAAGTCGGCCTTTCTGCGCGGCCAGCCCGACTCGGCCGTCTACTCGCTCTGC
ATCCCCGTCTCCGCCATCCTCAGCATCCACGAGGGCCGCGTCCTCGGCGCTGTCCCCGTCTACGTCGCCGTCATG
TTCGCCATCCGCCACCTCAACCACTGGGTCTCGACCTACCTGGGCGAGCGCCGCAACCTGTCCGCGGCCGACATC
GCGCAGCAGCAGTTTAAGGACTGGTTCGCGCACATGATGCTGGGCCTCGGCTTCGCCGAGCTCGACGACGTGCGC
CAGAAGCGCCGCAACCGCATGTCGCTCAGCTCCGACATCATCGACGAGTACATCCGCCGCCAGGACGACGGCTGC
CGCTCCGCCAGCCTCGCCAGCATCGAGTCCGACTTCTCCGACAAGCTGCACCGCCCCTGGGACCTGTACGAGGGC
CCGGCCGCCGCCGCCGACGACCGCCCGCTGCCGGCCGTGCCCGAGGCCGAGGCCAGATGA
Gene >Hirsu2|3463
ATGGCCGTCATGCCGTCCCTGGCCGGACTCTGGAACCGGGCGCTGGCGGAGCTGGTCGTCTACGGGCTGCTGTAC
GGCGCCGTCTTCCGCTTCCACACGAGCCGGACGGTGCAGGTGTACAACCAAAAGTTCCGCAAGTCGACCAGCTAC
CACCTGCCGGTGCACATCGCGACCGGCCTCTTCGAGATCACGCGGTACCAGGTGCGGGTGGCGCGGCACGGCGAG
GCGGCGGTGGCGCCCGGCGGCGGCGACGTCGTCGTCTGCCTCATCTGGGCCTGGACCAGCCTGTGCCTGGTGCGG
TCGCTGCAGCGGGGCGACCCGGCGACGACGCGCCCGGCCTACCAGGCCGGCATCGTGCTGCGGCCGCTGTGCAGC
CTGGCCGGCTTCGCGCTGCAGAGCCCGTCGCTGTACCGCGTCTGCGCCAAGGCCATCAACAGCTTCGTCTACGCC
CGCGTCGGCATCTGGCTCGTCCACAAGTCGGCCTTTCTGCGCGGCCAGCCCGACTCGGCCGTCTACTCGCTCTGC
ATCCCCGTCTCCGCCATCCTCAGCATCCACGAGGGCCGCGTCCTCGGCGCTGTCCCCGTCTACGTCGCCGTCATG
TTCGCCATCCGCCACCTCAACCACTGGGTCTCGACCTACCTGGGCGAGCGCCGCAACCTGTAAGTCCTCTCCTCC
TCCTCCTCTCCTCCTCCTCCTCGACACCTCCTCGACGGGAACAAGGAGAGAATGAAAAGGGGGAAGACGGTTCCT
GACAACGCACAAATAAAAAGGTCCGCGGCCGACATCGCGCAGCAGCAGTTTAAGGACTGGTTCGCGCACATGATG
CTGGGCCTCGGCTTCGCCGAGCTCGACGACGTGCGCCAGAAGCGCCGCAACCGCATGTCGCTCAGCTCCGACATC
ATCGACGAGTACATCCGCCGCCAGGACGACGGCTGCCGCTCCGCCAGCCTCGCCAGCATCGAGTCCGACTTCTCC
GACAAGCTGCACCGCCCCTGGGACCTGTACGAGGGCCCGGCCGCCGCCGCCGACGACCGCCCGCTGCCGGCCGTG
CCCGAGGCCGAGGCCAGATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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