© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3461 |
| Gene name | |
| Location | Contig_1901:20..963 |
| Strand | + |
| Gene length (bp) | 943 |
| Transcript length (bp) | 825 |
| Coding sequence length (bp) | 825 |
| Protein length (aa) | 275 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.7099 | 0.4086 | 0.1568 | 0.1349 | 0.4523 | 0.0176 | 0.2238 | 0.2419 | 0.2043 | 0.04 |
| Orthofinder run ID | 4 |
| Orthogroup | 7006 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps kimflemingae | Ophio5|3582 |
| Ophiocordyceps subramaniannii | Hirsu2|3461 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3461 LWASVRDRPPTGAERARVERALYLFQLLVCFCQHMAFRREEAVDRAYIAACHDKVAALQRCLVTRLMAPWEMYQV IAIQAYFRRAIHGFEHPPWYSERVMPGILSAGLDLMHATLCQADGGAAALTAAQERAAQERPFRPLCIIASRGFH QTWTRTRPGPATAYRPFGTEADAAAYASWRTLEETQLRLVGTHQAWADLLEDRLAEMEGRLDLWSAALWDPGRWA DMFGTVRLPNPDVWRDLRLHWNPMSAGFHVLAHPEDVVVPAASPAAAEA* |
| Coding | >Hirsu2|3461 CTGTGGGCCTCGGTCCGGGACCGGCCGCCGACCGGCGCCGAGCGTGCCCGCGTCGAGCGCGCCCTCTACCTCTTC CAGCTGCTCGTCTGCTTCTGCCAGCACATGGCCTTCCGCCGCGAGGAGGCCGTCGACCGCGCCTACATCGCCGCT TGCCACGACAAGGTGGCCGCCCTGCAGCGCTGTCTGGTGACGCGCCTGATGGCGCCGTGGGAGATGTACCAGGTC ATCGCCATTCAGGCCTATTTTCGGCGTGCCATTCACGGCTTCGAGCATCCGCCGTGGTACAGCGAGCGCGTCATG CCCGGCATCCTCAGCGCCGGCCTGGACCTGATGCACGCGACGCTGTGCCAGGCCGACGGCGGCGCAGCGGCGCTG ACGGCGGCGCAGGAGCGAGCGGCGCAGGAGCGGCCCTTCCGGCCGCTGTGCATCATCGCCTCGCGCGGCTTCCAC CAGACGTGGACGCGGACGCGGCCCGGGCCGGCGACGGCCTACCGCCCCTTCGGCACCGAGGCCGACGCGGCGGCG TACGCGTCGTGGCGCACGCTCGAGGAGACGCAGCTGCGCCTCGTCGGCACCCACCAGGCCTGGGCCGACCTGCTC GAGGACCGCCTCGCCGAGATGGAAGGCCGCCTCGACCTCTGGAGCGCCGCCCTCTGGGACCCGGGCCGCTGGGCC GACATGTTCGGAACCGTCCGCCTGCCCAACCCGGACGTCTGGCGTGACCTGCGCCTGCACTGGAACCCCATGTCG GCCGGCTTTCACGTCCTCGCCCACCCGGAGGACGTCGTCGTGCCGGCGGCGTCGCCCGCTGCTGCCGAAGCCTGA |
| Transcript | >Hirsu2|3461 CTGTGGGCCTCGGTCCGGGACCGGCCGCCGACCGGCGCCGAGCGTGCCCGCGTCGAGCGCGCCCTCTACCTCTTC CAGCTGCTCGTCTGCTTCTGCCAGCACATGGCCTTCCGCCGCGAGGAGGCCGTCGACCGCGCCTACATCGCCGCT TGCCACGACAAGGTGGCCGCCCTGCAGCGCTGTCTGGTGACGCGCCTGATGGCGCCGTGGGAGATGTACCAGGTC ATCGCCATTCAGGCCTATTTTCGGCGTGCCATTCACGGCTTCGAGCATCCGCCGTGGTACAGCGAGCGCGTCATG CCCGGCATCCTCAGCGCCGGCCTGGACCTGATGCACGCGACGCTGTGCCAGGCCGACGGCGGCGCAGCGGCGCTG ACGGCGGCGCAGGAGCGAGCGGCGCAGGAGCGGCCCTTCCGGCCGCTGTGCATCATCGCCTCGCGCGGCTTCCAC CAGACGTGGACGCGGACGCGGCCCGGGCCGGCGACGGCCTACCGCCCCTTCGGCACCGAGGCCGACGCGGCGGCG TACGCGTCGTGGCGCACGCTCGAGGAGACGCAGCTGCGCCTCGTCGGCACCCACCAGGCCTGGGCCGACCTGCTC GAGGACCGCCTCGCCGAGATGGAAGGCCGCCTCGACCTCTGGAGCGCCGCCCTCTGGGACCCGGGCCGCTGGGCC GACATGTTCGGAACCGTCCGCCTGCCCAACCCGGACGTCTGGCGTGACCTGCGCCTGCACTGGAACCCCATGTCG GCCGGCTTTCACGTCCTCGCCCACCCGGAGGACGTCGTCGTGCCGGCGGCGTCGCCCGCTGCTGCCGAAGCCTGA |
| Gene | >Hirsu2|3461 CTGTGGGCCTCGGTCCGGGACCGGCCGCCGACCGGCGCCGAGCGTGCCCGCGTCGAGCGCGCCCTCTACCTCTTC CAGCTGCTCGTCTGCTTCTGCCAGCACATGGCCTTCCGCCGCGAGGAGGCCGTCGACCGCGCCTACATCGCCGCT TGCCACGACAAGGTGGCCGCCCTGCAGCGCTGTCTGGTGACGCGCCTGATGGCGCCGTGGGAGATGTACCAGGTC ATCGCCATTCAGGCCTATTTTCGGCGTGCCATTCACGGCTTCGGTCCGTCCCCCCCCTTATTTGGCTTTGATTGG CTTTGGTTTTTGTCTCCCCCCCTTTTCTCGCAAGATGACGACGAGTGACGAGTGAGATTTGCTGACCGTCGCACT CGTGCCTCCAGAGCATCCGCCGTGGTACAGCGAGCGCGTCATGCCCGGCATCCTCAGCGCCGGCCTGGACCTGAT GCACGCGACGCTGTGCCAGGCCGACGGCGGCGCAGCGGCGCTGACGGCGGCGCAGGAGCGAGCGGCGCAGGAGCG GCCCTTCCGGCCGCTGTGCATCATCGCCTCGCGCGGCTTCCACCAGACGTGGACGCGGACGCGGCCCGGGCCGGC GACGGCCTACCGCCCCTTCGGCACCGAGGCCGACGCGGCGGCGTACGCGTCGTGGCGCACGCTCGAGGAGACGCA GCTGCGCCTCGTCGGCACCCACCAGGCCTGGGCCGACCTGCTCGAGGACCGCCTCGCCGAGATGGAAGGCCGCCT CGACCTCTGGAGCGCCGCCCTCTGGGACCCGGGCCGCTGGGCCGACATGTTCGGAACCGTCCGCCTGCCCAACCC GGACGTCTGGCGTGACCTGCGCCTGCACTGGAACCCCATGTCGGCCGGCTTTCACGTCCTCGCCCACCCGGAGGA CGTCGTCGTGCCGGCGGCGTCGCCCGCTGCTGCCGAAGCCTGA |