Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|346
Gene name
LocationContig_1066:8746..9145
Strand+
Gene length (bp)399
Transcript length (bp)252
Coding sequence length (bp)252
Protein length (aa) 84

Overview

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Peroxisome 0.3608 0.1825 0.2379 0.0717 0.5289 0.4775 0.3116 0.2989 0.3558 0.6218

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup328
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|1774
Ophiocordyceps australis 1348a (Ghana) OphauG2|2226
Ophiocordyceps australis map64 (Brazil) OphauB2|5589
Ophiocordyceps australis map64 (Brazil) OphauB2|5590
Ophiocordyceps camponoti-floridani Ophcf2|07285
Ophiocordyceps camponoti-floridani Ophcf2|07286
Ophiocordyceps camponoti-rufipedis Ophun1|278
Ophiocordyceps kimflemingae Ophio5|1931
Ophiocordyceps subramaniannii Hirsu2|345
Ophiocordyceps subramaniannii Hirsu2|346 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|346
MSARSTVLAPRVLAVASHVVSGALGSVVDVFSSSSSSSSSSSSNVGNKVAVFVLQSLGCDVAALNTVQFSEWSDG
RSGALRPR*
Coding >Hirsu2|346
ATGTCGGCCAGAAGCACGGTGCTCGCGCCGCGAGTCCTGGCCGTGGCCAGCCATGTCGTATCGGGTGCCTTGGGC
TCCGTCGTTGACGTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGCAACGTCGGCAACAAGGTTGCC
GTCTTCGTGCTGCAGTCGCTGGGCTGCGACGTCGCGGCCCTGAACACGGTGCAGTTCAGTGAGTGGTCCGACGGC
CGGTCCGGGGCTTTGCGGCCACGCTGA
Transcript >Hirsu2|346
ATGTCGGCCAGAAGCACGGTGCTCGCGCCGCGAGTCCTGGCCGTGGCCAGCCATGTCGTATCGGGTGCCTTGGGC
TCCGTCGTTGACGTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGCAACGTCGGCAACAAGGTTGCC
GTCTTCGTGCTGCAGTCGCTGGGCTGCGACGTCGCGGCCCTGAACACGGTGCAGTTCAGTGAGTGGTCCGACGGC
CGGTCCGGGGCTTTGCGGCCACGCTGA
Gene >Hirsu2|346
ATGTCGGCCAGAAGCACGGTGCTCGCGCCGCGAGTCCTGGCCGTGGCCAGCCATGTGCGTGCGCGCTTCTCATCT
CCCCCCTCTCCCCTCCTTCTCCCGCCCGTTGCCGCTCTCGCGGGAGACTGACGACGAGGTTGCATCTGCAGGTCG
TATCGGGGTAAGGGGACCGACCGCCCGACTGGGCCGCCCGTGTGTGTGCCTGTCGCGTCCAGTGCCTTGGGCTCC
GTCGTTGACGTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGCAACGTCGGCAACAAGGTTGCCGTC
TTCGTGCTGCAGTCGCTGGGCTGCGACGTCGCGGCCCTGAACACGGTGCAGTTCAGTGAGTGGTCCGACGGCCGG
TCCGGGGCTTTGCGGCCACGCTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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