© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Hirsu2|3458 |
| Gene name | |
| Location | Contig_1900:63..267 |
| Strand | + |
| Gene length (bp) | 204 |
| Transcript length (bp) | 204 |
| Coding sequence length (bp) | 204 |
| Protein length (aa) | 68 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Signal peptide|Mitochondrial transit peptide | 0.3683 | 0.3448 | 0.3386 | 0.1108 | 0.5641 | 0.1117 | 0.4482 | 0.454 | 0.4654 | 0.0661 |
| Orthofinder run ID | 4 |
| Orthogroup | 5129 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3458 LGRLLGALRLLFASWAGVLGREGLDRRAWGWYVAVRPDVEAGPAGWGAKGTLRLATILALRRKEGQE* |
| Coding | >Hirsu2|3458 CTGGGACGGCTCCTCGGGGCCCTGAGGCTGCTGTTCGCCAGCTGGGCCGGCGTGCTCGGCAGGGAGGGGCTGGAC CGGCGGGCCTGGGGCTGGTACGTCGCGGTGCGGCCGGACGTCGAGGCCGGGCCTGCGGGCTGGGGCGCCAAGGGG ACGCTGAGGCTGGCCACGATTCTCGCGCTGCGGCGCAAGGAGGGCCAGGAGTGA |
| Transcript | >Hirsu2|3458 CTGGGACGGCTCCTCGGGGCCCTGAGGCTGCTGTTCGCCAGCTGGGCCGGCGTGCTCGGCAGGGAGGGGCTGGAC CGGCGGGCCTGGGGCTGGTACGTCGCGGTGCGGCCGGACGTCGAGGCCGGGCCTGCGGGCTGGGGCGCCAAGGGG ACGCTGAGGCTGGCCACGATTCTCGCGCTGCGGCGCAAGGAGGGCCAGGAGTGA |
| Gene | >Hirsu2|3458 CTGGGACGGCTCCTCGGGGCCCTGAGGCTGCTGTTCGCCAGCTGGGCCGGCGTGCTCGGCAGGGAGGGGCTGGAC CGGCGGGCCTGGGGCTGGTACGTCGCGGTGCGGCCGGACGTCGAGGCCGGGCCTGCGGGCTGGGGCGCCAAGGGG ACGCTGAGGCTGGCCACGATTCTCGCGCTGCGGCGCAAGGAGGGCCAGGAGTGA |