Protein ID | Hirsu2|344 |
Gene name | |
Location | Contig_1066:3188..5466 |
Strand | + |
Gene length (bp) | 2278 |
Transcript length (bp) | 1866 |
Coding sequence length (bp) | 1866 |
Protein length (aa) | 622 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12632 | Vezatin | Mysoin-binding motif of peroxisomes | 3.2E-69 | 163 | 441 |
GO Term | Description | Terminal node |
---|---|---|
GO:0017022 | myosin binding | Yes |
GO:0008092 | cytoskeletal protein binding | No |
GO:0005515 | protein binding | No |
GO:0005488 | binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 44 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 148 | 170 | 22 |
2 | 183 | 202 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|344 MEPVVFQETPLAEYLRDGGDESEAEWAAVDSPPSRPPSSLLASSPPSSPSPFAPTGRPLVKARFRRKTTSASCPA ESPSASAFRAIRRNCSAVLAAGIDRSDSTQFLEQFRYTIIASQLLSGHSILGPRPTGLETTATTTEHRDQLRLST QGITLSILGALAIAVFLHLVRGSAMLPQMTRKGKIFLLAVLAALALVAIAYLRRQRLRSAREQSLYELTAFASLS HDFDSATEATLSLVQEVELVSRGYRISAPLPPISRLEDRSQGRKCVRLRRTLKASFGDVLTKYSQASDTIKAFSE QTELEKYYDMYDISDFDMSDALQGYNEAELEDAESLRTLKILAARFHTRRKMLLCGLLALDVSDEAAELVRWQAA AGALQSLNMCTKASYEKVRAILSEEESFPIPPSPKGPLTPGRERWRSQLRKLNSLSTGIRGLQAKLHLLREESDR ALDDSNDISELGPSLLSQYESIGVDLKELMTAWEEGKTALALGIDRNEKRLSSMSTVLSPTSSLSGLTTVEEGNA ADALKALTGESPTRSEAPEADTAEVFEAVARPRPRSLLTREERLAKMRDDREQQAQARQQLDATRGMLRELETVI SQRPRSRTSAPASDVRIAAFD* |
Coding | >Hirsu2|344 ATGGAGCCTGTCGTCTTCCAGGAGACGCCGCTGGCTGAATATCTCAGAGATGGAGGAGACGAGTCCGAGGCAGAA TGGGCCGCCGTCGACAGCCCGCCGTCGCGGCCGCCCTCGTCGTTGTTGGCCTCGTCGCCGCCCAGCAGCCCTTCG CCATTCGCTCCCACCGGCCGTCCCTTGGTCAAGGCCCGCTTTCGCCGCAAGACGACGAGCGCCTCGTGCCCGGCC GAATCGCCTTCCGCCTCGGCCTTTCGAGCCATCCGGAGAAATTGCTCGGCTGTCCTGGCCGCCGGCATCGATCGC TCCGACAGCACCCAGTTCCTCGAACAGTTCCGCTATACCATCATTGCCTCGCAGCTCCTGAGCGGACACTCCATC CTGGGGCCCCGCCCGACAGGCCTGGAAACCACCGCGACGACGACCGAGCACAGGGACCAGCTTCGCCTCTCCACC CAAGGCATCACCCTGTCGATCCTGGGAGCGCTGGCAATCGCCGTCTTCCTCCACCTCGTCCGCGGCAGTGCAATG CTGCCGCAGATGACGCGGAAAGGCAAGATATTTCTGCTGGCCGTGCTCGCCGCCTTGGCCCTCGTGGCCATCGCG TATCTGAGGCGGCAACGACTGCGCAGTGCGAGAGAGCAATCCTTGTATGAGCTGACGGCCTTTGCGTCCCTTTCG CACGATTTCGACAGCGCGACCGAGGCTACCTTGTCCCTGGTCCAGGAGGTAGAGCTCGTCTCGCGAGGATATCGC ATCAGCGCACCTCTGCCCCCCATCAGCCGGCTGGAGGACCGCAGCCAGGGCCGGAAATGCGTCCGCTTGCGCAGG ACGCTCAAGGCCTCCTTCGGCGACGTCCTGACCAAGTACAGCCAAGCGTCCGACACGATCAAGGCCTTTTCCGAG CAGACGGAGCTCGAAAAATACTACGACATGTACGACATCAGCGACTTTGACATGTCCGACGCCCTCCAGGGCTAC AACGAGGCCGAGCTCGAGGATGCAGAGTCGCTGCGGACGCTGAAAATCCTCGCCGCCCGCTTCCACACGAGGCGT AAGATGCTGCTGTGCGGACTGCTGGCCCTGGACGTCAGCGACGAGGCGGCCGAGCTGGTCCGCTGGCAGGCTGCG GCAGGCGCGCTGCAAAGCCTGAATATGTGTACCAAGGCGTCGTATGAGAAGGTGCGGGCCATCTTGAGCGAAGAA GAGTCCTTTCCAATACCTCCCTCACCCAAGGGGCCGTTGACGCCGGGCAGAGAGCGGTGGCGATCTCAACTGCGA AAGCTCAATTCACTGTCTACCGGGATACGAGGCCTACAGGCCAAACTTCACCTGCTGCGAGAGGAATCAGACCGG GCGCTGGACGATTCAAACGACATCTCGGAGCTGGGTCCCAGCCTGTTGTCTCAATACGAGTCGATCGGGGTCGAT CTCAAGGAGCTGATGACGGCGTGGGAAGAGGGCAAGACCGCACTGGCCCTGGGAATCGACAGGAACGAAAAGAGG CTGTCGTCGATGAGCACGGTGCTCTCGCCGACGAGCTCCCTCAGCGGCCTGACGACGGTGGAGGAGGGCAACGCG GCCGACGCGCTCAAGGCGTTGACGGGCGAGTCCCCGACGCGGTCGGAGGCGCCGGAAGCGGACACGGCCGAAGTC TTCGAGGCAGTGGCGCGGCCGCGGCCGCGGAGTCTACTCACGAGAGAGGAGCGGTTGGCCAAGATGAGGGACGAC AGGGAGCAGCAGGCCCAGGCGCGACAGCAGCTGGACGCGACCCGGGGCATGCTGCGCGAGCTGGAAACCGTCATC AGCCAGCGGCCAAGGAGTCGCACCAGCGCCCCTGCCTCTGACGTACGAATCGCCGCGTTTGACTAG |
Transcript | >Hirsu2|344 ATGGAGCCTGTCGTCTTCCAGGAGACGCCGCTGGCTGAATATCTCAGAGATGGAGGAGACGAGTCCGAGGCAGAA TGGGCCGCCGTCGACAGCCCGCCGTCGCGGCCGCCCTCGTCGTTGTTGGCCTCGTCGCCGCCCAGCAGCCCTTCG CCATTCGCTCCCACCGGCCGTCCCTTGGTCAAGGCCCGCTTTCGCCGCAAGACGACGAGCGCCTCGTGCCCGGCC GAATCGCCTTCCGCCTCGGCCTTTCGAGCCATCCGGAGAAATTGCTCGGCTGTCCTGGCCGCCGGCATCGATCGC TCCGACAGCACCCAGTTCCTCGAACAGTTCCGCTATACCATCATTGCCTCGCAGCTCCTGAGCGGACACTCCATC CTGGGGCCCCGCCCGACAGGCCTGGAAACCACCGCGACGACGACCGAGCACAGGGACCAGCTTCGCCTCTCCACC CAAGGCATCACCCTGTCGATCCTGGGAGCGCTGGCAATCGCCGTCTTCCTCCACCTCGTCCGCGGCAGTGCAATG CTGCCGCAGATGACGCGGAAAGGCAAGATATTTCTGCTGGCCGTGCTCGCCGCCTTGGCCCTCGTGGCCATCGCG TATCTGAGGCGGCAACGACTGCGCAGTGCGAGAGAGCAATCCTTGTATGAGCTGACGGCCTTTGCGTCCCTTTCG CACGATTTCGACAGCGCGACCGAGGCTACCTTGTCCCTGGTCCAGGAGGTAGAGCTCGTCTCGCGAGGATATCGC ATCAGCGCACCTCTGCCCCCCATCAGCCGGCTGGAGGACCGCAGCCAGGGCCGGAAATGCGTCCGCTTGCGCAGG ACGCTCAAGGCCTCCTTCGGCGACGTCCTGACCAAGTACAGCCAAGCGTCCGACACGATCAAGGCCTTTTCCGAG CAGACGGAGCTCGAAAAATACTACGACATGTACGACATCAGCGACTTTGACATGTCCGACGCCCTCCAGGGCTAC AACGAGGCCGAGCTCGAGGATGCAGAGTCGCTGCGGACGCTGAAAATCCTCGCCGCCCGCTTCCACACGAGGCGT AAGATGCTGCTGTGCGGACTGCTGGCCCTGGACGTCAGCGACGAGGCGGCCGAGCTGGTCCGCTGGCAGGCTGCG GCAGGCGCGCTGCAAAGCCTGAATATGTGTACCAAGGCGTCGTATGAGAAGGTGCGGGCCATCTTGAGCGAAGAA GAGTCCTTTCCAATACCTCCCTCACCCAAGGGGCCGTTGACGCCGGGCAGAGAGCGGTGGCGATCTCAACTGCGA AAGCTCAATTCACTGTCTACCGGGATACGAGGCCTACAGGCCAAACTTCACCTGCTGCGAGAGGAATCAGACCGG GCGCTGGACGATTCAAACGACATCTCGGAGCTGGGTCCCAGCCTGTTGTCTCAATACGAGTCGATCGGGGTCGAT CTCAAGGAGCTGATGACGGCGTGGGAAGAGGGCAAGACCGCACTGGCCCTGGGAATCGACAGGAACGAAAAGAGG CTGTCGTCGATGAGCACGGTGCTCTCGCCGACGAGCTCCCTCAGCGGCCTGACGACGGTGGAGGAGGGCAACGCG GCCGACGCGCTCAAGGCGTTGACGGGCGAGTCCCCGACGCGGTCGGAGGCGCCGGAAGCGGACACGGCCGAAGTC TTCGAGGCAGTGGCGCGGCCGCGGCCGCGGAGTCTACTCACGAGAGAGGAGCGGTTGGCCAAGATGAGGGACGAC AGGGAGCAGCAGGCCCAGGCGCGACAGCAGCTGGACGCGACCCGGGGCATGCTGCGCGAGCTGGAAACCGTCATC AGCCAGCGGCCAAGGAGTCGCACCAGCGCCCCTGCCTCTGACGTACGAATCGCCGCGTTTGACTAG |
Gene | >Hirsu2|344 ATGGAGCCTGTCGTCTTCCAGGAGACGCCGCTGGCTGAATATCTCAGAGGTGAGTCGGCTGGTCTTCAGTCGGCT GGTCTTCCGCTGGCCTCGACCACCGCCCCTCCAGTCCTGACGTTGGAACCGCAGATGGAGGAGACGAGTCCGAGG CAGAATGGGCCGCCGTCGACAGCCCGCCGTCGCGGCCGCCCTCGTCGTTGTTGGCCTCGTCGCCGCCCAGCAGCC CTTCGCCATTCGCTCCCACCGGCCGTCCCTTGGTCAAGGCCCGCTTTCGCCGCAAGACGACGAGCGCCTCGTGCC CGGCCGAATCGCCTTCCGCCTCGGCCTTTCGAGCCATCCGGAGAAATTGCTCGGTGCGCTTGACCTCGTGCCTCC CCCCTCCGCTCATGGTGGCCCTGGCCTGCCTCGTCTGGTTCGCAGCTGACAGCGTGCTCGTTGTCCTGACAGGCT GTCCTGGCCGCCGGCATCGATCGCTCCGACAGCACCCAGTTCCTCGAACAGTTCCGCTATACCATCATTGCCTCG CAGCTCCTGAGCGGACACTCCATCCTGGGGCCCCGCCCGACAGGCCTGGAAACCACCGCGACGACGACCGAGCAC AGGGACCAGCTTCGCCTCTCCACCCAAGGCATCACCCTGTCGATCCTGGGAGCGCTGGCAATCGCCGTCTTCCTC CACCTCGTCCGCGGCAGTGCAATGCTGCCGCAGATGACGCGGAAAGGCAAGATATTTCTGCTGGCCGTGCTCGCC GCCTTGGCCCTCGTGGCCATCGCGTATCTGAGGCGGCAACGACTGCGCAGTGCGAGAGAGCAATCCTTGTATGAG CTGACGGCCTTTGCGTCCCTTTCGCACGATTTCGACAGCGCGACCGAGGCTACCTTGTCCCTGGTCCAGGAGGTA GAGCTCGTCTCGCGAGGATATCGCATGTGGGACTCGCCCTGGCCCGCCGTCGACCTTGTCCGACGAGGCTGACTT GCTTGCAGCAGCGCACCTCTGCCCCCCATCAGCCGGCTGGAGGACCGCAGCCAGGGCCGGAAATGCGTCCGCTTG CGCAGGACGCTCAAGGCCTCCTTCGGCGACGTCCTGACCAAGTACAGCCAAGCGTCCGACACGATCAAGGCCTTT TCCGAGCAGACGGAGCTCGAAAAATACTACGACATGTACGACATCAGCGACTTTGACATGTCCGACGCCCTCCAG GGCTACAACGAGGCCGAGCTCGAGGATGCAGAGTCGCTGCGGACGCTGAAAATCCTCGCCGCCCGCTTCCACACG AGGCGTAAGATGCTGCTGTGCGGACTGCTGGCCCTGGACGTCAGCGACGAGGCGGCCGAGCTGGTCCGCTGGCAG GCTGCGGCAGGCGCGCTGCAAAGCCTGAATATGTGTACCAAGGCGTCGTATGAGAAGGTGCGGGCCATCTTGAGC GAAGAAGAGTGTGAGTGTCCTTTCCTTTTCCCTCCCCGTCTCTTCTTCTCCTCGCCTCCCCGTCGTCCCCTTCGA TCTGTACCGTCCATCCACGCTCGACGTTGAACTGTGCCGCCTGTCCGTCATCTTCCGTCTGGAGCTGTGGCGTCT ATTCAGTTGCGCTGACGCCGGCCGTCCGTCTATCCATCTAGCCTTTCCAATACCTCCCTCACCCAAGGGGCCGTT GACGCCGGGCAGAGAGCGGTGGCGATCTCAACTGCGAAAGCTCAATTCACTGTCTACCGGGATACGAGGCCTACA GGCCAAACTTCACCTGCTGCGAGAGGAATCAGACCGGGCGCTGGACGATTCAAACGACATCTCGGAGCTGGGTCC CAGCCTGTTGTCTCAATACGAGTCGATCGGGGTCGATCTCAAGGAGCTGATGACGGCGTGGGAAGAGGGCAAGAC CGCACTGGCCCTGGGAATCGACAGGAACGAAAAGAGGCTGTCGTCGATGAGCACGGTGCTCTCGCCGACGAGCTC CCTCAGCGGCCTGACGACGGTGGAGGAGGGCAACGCGGCCGACGCGCTCAAGGCGTTGACGGGCGAGTCCCCGAC GCGGTCGGAGGCGCCGGAAGCGGACACGGCCGAAGTCTTCGAGGCAGTGGCGCGGCCGCGGCCGCGGAGTCTACT CACGAGAGAGGAGCGGTTGGCCAAGATGAGGGACGACAGGGAGCAGCAGGCCCAGGCGCGACAGCAGCTGGACGC GACCCGGGGCATGCTGCGCGAGCTGGAAACCGTCATCAGCCAGCGGCCAAGGAGTCGCACCAGCGCCCCTGCCTC TGACGTACGAATCGCCGCGTTTGACTAG |