© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3434 |
| Gene name | |
| Location | Contig_19:39806..40442 |
| Strand | - |
| Gene length (bp) | 636 |
| Transcript length (bp) | 636 |
| Coding sequence length (bp) | 636 |
| Protein length (aa) | 212 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14085|SEC72_SCHPO | Translocation protein sec72 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sec72 PE=3 SV=1 | 73 | 185 | 3.0E-22 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Peroxisomal targeting signal | 0.7341 | 0.5086 | 0.0306 | 0.0397 | 0.2366 | 0.0158 | 0.4011 | 0.2572 | 0.4521 | 0.1657 |
| Orthofinder run ID | 4 |
| Orthogroup | 2419 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3434 MSDLTHFDLLPLQMDPQSKAIGVAAAGATAAARRPRALEAELEQLNSLHRALLSLDGAGGVPPAPIPVNPKRTSN VTKLRDNGNGEYRRQRYGEAVRLYTLGLQMALTRPLWEPAALVREEVSGLLANRAQAHMAMRAWPEGAVDAEASV EARRVGNAKGWWRRGRCLVEMGRLDEARDWVKSGLEVEGEEAELVGLLREIDALIDKRKAP* |
| Coding | >Hirsu2|3434 ATGTCGGACCTCACGCACTTCGACCTCCTGCCGCTGCAGATGGACCCGCAGTCGAAGGCGATCGGGGTGGCGGCA GCGGGCGCGACGGCAGCAGCGCGGCGGCCGCGGGCGCTGGAGGCGGAGCTGGAGCAGCTCAACAGCCTGCACCGG GCGCTGCTGTCGCTCGACGGCGCGGGGGGCGTGCCGCCGGCGCCGATCCCCGTCAACCCGAAGCGGACGAGCAAC GTGACGAAGCTGCGCGACAACGGCAACGGCGAGTACCGGCGGCAGCGGTACGGCGAGGCCGTGCGGCTGTACACG CTGGGCCTGCAGATGGCGCTGACGCGGCCGCTGTGGGAGCCGGCCGCGCTGGTGCGCGAGGAGGTCAGCGGCCTG CTGGCGAACCGGGCCCAGGCGCACATGGCGATGCGGGCCTGGCCCGAGGGCGCCGTCGACGCCGAGGCCAGCGTC GAGGCCCGCCGCGTCGGCAACGCAAAGGGCTGGTGGCGCCGCGGCCGCTGCCTCGTTGAGATGGGCCGCCTCGAC GAGGCTCGCGACTGGGTCAAGAGCGGCCTCGAGGTCGAGGGCGAGGAGGCCGAGCTCGTCGGCCTGCTGCGCGAG ATTGACGCCCTCATCGACAAGCGCAAGGCTCCCTAG |
| Transcript | >Hirsu2|3434 ATGTCGGACCTCACGCACTTCGACCTCCTGCCGCTGCAGATGGACCCGCAGTCGAAGGCGATCGGGGTGGCGGCA GCGGGCGCGACGGCAGCAGCGCGGCGGCCGCGGGCGCTGGAGGCGGAGCTGGAGCAGCTCAACAGCCTGCACCGG GCGCTGCTGTCGCTCGACGGCGCGGGGGGCGTGCCGCCGGCGCCGATCCCCGTCAACCCGAAGCGGACGAGCAAC GTGACGAAGCTGCGCGACAACGGCAACGGCGAGTACCGGCGGCAGCGGTACGGCGAGGCCGTGCGGCTGTACACG CTGGGCCTGCAGATGGCGCTGACGCGGCCGCTGTGGGAGCCGGCCGCGCTGGTGCGCGAGGAGGTCAGCGGCCTG CTGGCGAACCGGGCCCAGGCGCACATGGCGATGCGGGCCTGGCCCGAGGGCGCCGTCGACGCCGAGGCCAGCGTC GAGGCCCGCCGCGTCGGCAACGCAAAGGGCTGGTGGCGCCGCGGCCGCTGCCTCGTTGAGATGGGCCGCCTCGAC GAGGCTCGCGACTGGGTCAAGAGCGGCCTCGAGGTCGAGGGCGAGGAGGCCGAGCTCGTCGGCCTGCTGCGCGAG ATTGACGCCCTCATCGACAAGCGCAAGGCTCCCTAG |
| Gene | >Hirsu2|3434 ATGTCGGACCTCACGCACTTCGACCTCCTGCCGCTGCAGATGGACCCGCAGTCGAAGGCGATCGGGGTGGCGGCA GCGGGCGCGACGGCAGCAGCGCGGCGGCCGCGGGCGCTGGAGGCGGAGCTGGAGCAGCTCAACAGCCTGCACCGG GCGCTGCTGTCGCTCGACGGCGCGGGGGGCGTGCCGCCGGCGCCGATCCCCGTCAACCCGAAGCGGACGAGCAAC GTGACGAAGCTGCGCGACAACGGCAACGGCGAGTACCGGCGGCAGCGGTACGGCGAGGCCGTGCGGCTGTACACG CTGGGCCTGCAGATGGCGCTGACGCGGCCGCTGTGGGAGCCGGCCGCGCTGGTGCGCGAGGAGGTCAGCGGCCTG CTGGCGAACCGGGCCCAGGCGCACATGGCGATGCGGGCCTGGCCCGAGGGCGCCGTCGACGCCGAGGCCAGCGTC GAGGCCCGCCGCGTCGGCAACGCAAAGGGCTGGTGGCGCCGCGGCCGCTGCCTCGTTGAGATGGGCCGCCTCGAC GAGGCTCGCGACTGGGTCAAGAGCGGCCTCGAGGTCGAGGGCGAGGAGGCCGAGCTCGTCGGCCTGCTGCGCGAG ATTGACGCCCTCATCGACAAGCGCAAGGCTCCCTAG |