© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3427 |
| Gene name | |
| Location | Contig_19:27472..28165 |
| Strand | + |
| Gene length (bp) | 693 |
| Transcript length (bp) | 693 |
| Coding sequence length (bp) | 693 |
| Protein length (aa) | 231 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01323 | DSBA | DSBA-like thioredoxin domain | 1.8E-29 | 6 | 214 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Mitochondrion | Peroxisomal targeting signal | 0.5887 | 0.3472 | 0.0251 | 0.0313 | 0.7856 | 0.0186 | 0.4253 | 0.0716 | 0.1436 | 0.3415 |
| Orthofinder run ID | 4 |
| Orthogroup | 6603 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps australis 1348a (Ghana) | OphauG2|4869 |
| Ophiocordyceps australis map64 (Brazil) | OphauB2|4784 |
| Ophiocordyceps subramaniannii | Hirsu2|3427 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3427 MTNFRIAVTSDTVCPWCYIGRRQLQRAQQLWLQRHPDSGDTFSITYMPYQLEPGLPRGPSSSMDKQRFFDEKFGR KRTDWMYQAVDRVGREVGIDFKHGGRTGSTRDSHRLVQLAKRYGPEVELRTVDGLFAAYFEREMDITAYDTLRTV AINAGIPEDDFREAIVDGDYGGSQVDEATKKARLEGVSGVPDFTIQGMFSLGGANDPETFVDAFERVKALEEKGE QESKD* |
| Coding | >Hirsu2|3427 ATGACCAACTTCCGCATCGCCGTAACGTCGGACACGGTATGTCCGTGGTGCTACATCGGCCGGCGGCAGCTGCAA AGGGCCCAACAGCTCTGGCTCCAGCGGCATCCCGACAGCGGCGACACATTCTCCATCACGTACATGCCCTACCAG CTCGAGCCGGGGCTGCCCAGGGGCCCGTCGTCCAGCATGGACAAGCAGCGCTTCTTCGACGAGAAGTTTGGGCGC AAGCGTACCGACTGGATGTACCAGGCCGTCGACAGGGTCGGCCGCGAGGTCGGCATCGACTTTAAGCACGGCGGG AGGACGGGCAGCACCCGGGACTCGCATCGCCTCGTGCAACTGGCCAAGCGGTACGGCCCCGAGGTCGAGCTCAGG ACCGTCGACGGGCTCTTCGCCGCCTACTTTGAGCGCGAGATGGACATCACGGCCTACGACACGCTGCGGACGGTT GCGATCAATGCGGGCATCCCCGAAGACGACTTCAGGGAGGCCATCGTCGACGGCGACTACGGAGGTTCTCAGGTC GACGAGGCGACCAAGAAGGCCAGGCTCGAGGGCGTCTCCGGCGTGCCAGACTTTACTATCCAAGGCATGTTCAGT TTGGGCGGTGCGAATGACCCGGAGACCTTTGTCGACGCATTCGAAAGGGTCAAAGCCTTGGAAGAGAAGGGGGAG CAGGAGTCCAAGGATTAA |
| Transcript | >Hirsu2|3427 ATGACCAACTTCCGCATCGCCGTAACGTCGGACACGGTATGTCCGTGGTGCTACATCGGCCGGCGGCAGCTGCAA AGGGCCCAACAGCTCTGGCTCCAGCGGCATCCCGACAGCGGCGACACATTCTCCATCACGTACATGCCCTACCAG CTCGAGCCGGGGCTGCCCAGGGGCCCGTCGTCCAGCATGGACAAGCAGCGCTTCTTCGACGAGAAGTTTGGGCGC AAGCGTACCGACTGGATGTACCAGGCCGTCGACAGGGTCGGCCGCGAGGTCGGCATCGACTTTAAGCACGGCGGG AGGACGGGCAGCACCCGGGACTCGCATCGCCTCGTGCAACTGGCCAAGCGGTACGGCCCCGAGGTCGAGCTCAGG ACCGTCGACGGGCTCTTCGCCGCCTACTTTGAGCGCGAGATGGACATCACGGCCTACGACACGCTGCGGACGGTT GCGATCAATGCGGGCATCCCCGAAGACGACTTCAGGGAGGCCATCGTCGACGGCGACTACGGAGGTTCTCAGGTC GACGAGGCGACCAAGAAGGCCAGGCTCGAGGGCGTCTCCGGCGTGCCAGACTTTACTATCCAAGGCATGTTCAGT TTGGGCGGTGCGAATGACCCGGAGACCTTTGTCGACGCATTCGAAAGGGTCAAAGCCTTGGAAGAGAAGGGGGAG CAGGAGTCCAAGGATTAA |
| Gene | >Hirsu2|3427 ATGACCAACTTCCGCATCGCCGTAACGTCGGACACGGTATGTCCGTGGTGCTACATCGGCCGGCGGCAGCTGCAA AGGGCCCAACAGCTCTGGCTCCAGCGGCATCCCGACAGCGGCGACACATTCTCCATCACGTACATGCCCTACCAG CTCGAGCCGGGGCTGCCCAGGGGCCCGTCGTCCAGCATGGACAAGCAGCGCTTCTTCGACGAGAAGTTTGGGCGC AAGCGTACCGACTGGATGTACCAGGCCGTCGACAGGGTCGGCCGCGAGGTCGGCATCGACTTTAAGCACGGCGGG AGGACGGGCAGCACCCGGGACTCGCATCGCCTCGTGCAACTGGCCAAGCGGTACGGCCCCGAGGTCGAGCTCAGG ACCGTCGACGGGCTCTTCGCCGCCTACTTTGAGCGCGAGATGGACATCACGGCCTACGACACGCTGCGGACGGTT GCGATCAATGCGGGCATCCCCGAAGACGACTTCAGGGAGGCCATCGTCGACGGCGACTACGGAGGTTCTCAGGTC GACGAGGCGACCAAGAAGGCCAGGCTCGAGGGCGTCTCCGGCGTGCCAGACTTTACTATCCAAGGCATGTTCAGT TTGGGCGGTGCGAATGACCCGGAGACCTTTGTCGACGCATTCGAAAGGGTCAAAGCCTTGGAAGAGAAGGGGGAG CAGGAGTCCAAGGATTAA |