Protein ID | Hirsu2|3424 |
Gene name | |
Location | Contig_19:23775..24219 |
Strand | + |
Gene length (bp) | 444 |
Transcript length (bp) | 444 |
Coding sequence length (bp) | 444 |
Protein length (aa) | 148 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.054 | 0.02 | 0.9865 | 0.0717 | 0.0645 | 0.027 | 0.0749 | 0.073 | 0.0728 | 0.0046 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 20 | 0.999743 |
Orthofinder run ID | 4 |
Orthogroup | 760 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3424 MLSSSILALAAAALAGFGAAEPAARGRPCGLKIAPCPGNQICIPDSLDCEDLNRCKGTCRKRYQSCGGFRVKPLE CPKGFSCKDDPRLPPNCGLACDRPGICIPDKAPACSGLAGKRCPRGLDCYDRPNDGCDPRKGGADCIGVCLE* |
Coding | >Hirsu2|3424 ATGCTCTCGAGCTCTATCCTCGCCCTCGCAGCCGCTGCCCTAGCCGGCTTCGGCGCCGCAGAGCCCGCTGCCAGG GGCCGACCTTGCGGGCTGAAGATCGCTCCCTGCCCGGGGAACCAGATCTGCATCCCCGACTCGTTGGACTGCGAA GACCTCAACCGGTGCAAGGGCACCTGCCGGAAGAGGTACCAGTCGTGCGGCGGCTTCCGGGTCAAGCCGCTCGAG TGCCCCAAGGGCTTCTCGTGCAAGGACGACCCCCGACTGCCGCCCAACTGCGGCCTGGCCTGCGACCGGCCCGGC ATCTGCATCCCCGACAAGGCGCCCGCCTGCTCTGGCCTCGCGGGCAAGCGGTGCCCCAGGGGCCTCGACTGCTAC GACCGACCGAATGACGGGTGCGACCCGAGGAAGGGCGGCGCGGACTGCATCGGCGTCTGTCTGGAGTAG |
Transcript | >Hirsu2|3424 ATGCTCTCGAGCTCTATCCTCGCCCTCGCAGCCGCTGCCCTAGCCGGCTTCGGCGCCGCAGAGCCCGCTGCCAGG GGCCGACCTTGCGGGCTGAAGATCGCTCCCTGCCCGGGGAACCAGATCTGCATCCCCGACTCGTTGGACTGCGAA GACCTCAACCGGTGCAAGGGCACCTGCCGGAAGAGGTACCAGTCGTGCGGCGGCTTCCGGGTCAAGCCGCTCGAG TGCCCCAAGGGCTTCTCGTGCAAGGACGACCCCCGACTGCCGCCCAACTGCGGCCTGGCCTGCGACCGGCCCGGC ATCTGCATCCCCGACAAGGCGCCCGCCTGCTCTGGCCTCGCGGGCAAGCGGTGCCCCAGGGGCCTCGACTGCTAC GACCGACCGAATGACGGGTGCGACCCGAGGAAGGGCGGCGCGGACTGCATCGGCGTCTGTCTGGAGTAG |
Gene | >Hirsu2|3424 ATGCTCTCGAGCTCTATCCTCGCCCTCGCAGCCGCTGCCCTAGCCGGCTTCGGCGCCGCAGAGCCCGCTGCCAGG GGCCGACCTTGCGGGCTGAAGATCGCTCCCTGCCCGGGGAACCAGATCTGCATCCCCGACTCGTTGGACTGCGAA GACCTCAACCGGTGCAAGGGCACCTGCCGGAAGAGGTACCAGTCGTGCGGCGGCTTCCGGGTCAAGCCGCTCGAG TGCCCCAAGGGCTTCTCGTGCAAGGACGACCCCCGACTGCCGCCCAACTGCGGCCTGGCCTGCGACCGGCCCGGC ATCTGCATCCCCGACAAGGCGCCCGCCTGCTCTGGCCTCGCGGGCAAGCGGTGCCCCAGGGGCCTCGACTGCTAC GACCGACCGAATGACGGGTGCGACCCGAGGAAGGGCGGCGCGGACTGCATCGGCGTCTGTCTGGAGTAG |