Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3424
Gene name
LocationContig_19:23775..24219
Strand+
Gene length (bp)444
Transcript length (bp)444
Coding sequence length (bp)444
Protein length (aa) 148

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Extracellular Signal peptide 0.054 0.02 0.9865 0.0717 0.0645 0.027 0.0749 0.073 0.0728 0.0046

SignalP

SignalP signal predicted Location Score
Yes 1 - 20 0.999743

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup760
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|4871
Ophiocordyceps australis map64 (Brazil) OphauB2|4782
Ophiocordyceps camponoti-rufipedis Ophun1|1278
Ophiocordyceps kimflemingae Ophio5|1146
Ophiocordyceps kimflemingae Ophio5|2359
Ophiocordyceps subramaniannii Hirsu2|2474
Ophiocordyceps subramaniannii Hirsu2|3424 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3424
MLSSSILALAAAALAGFGAAEPAARGRPCGLKIAPCPGNQICIPDSLDCEDLNRCKGTCRKRYQSCGGFRVKPLE
CPKGFSCKDDPRLPPNCGLACDRPGICIPDKAPACSGLAGKRCPRGLDCYDRPNDGCDPRKGGADCIGVCLE*
Coding >Hirsu2|3424
ATGCTCTCGAGCTCTATCCTCGCCCTCGCAGCCGCTGCCCTAGCCGGCTTCGGCGCCGCAGAGCCCGCTGCCAGG
GGCCGACCTTGCGGGCTGAAGATCGCTCCCTGCCCGGGGAACCAGATCTGCATCCCCGACTCGTTGGACTGCGAA
GACCTCAACCGGTGCAAGGGCACCTGCCGGAAGAGGTACCAGTCGTGCGGCGGCTTCCGGGTCAAGCCGCTCGAG
TGCCCCAAGGGCTTCTCGTGCAAGGACGACCCCCGACTGCCGCCCAACTGCGGCCTGGCCTGCGACCGGCCCGGC
ATCTGCATCCCCGACAAGGCGCCCGCCTGCTCTGGCCTCGCGGGCAAGCGGTGCCCCAGGGGCCTCGACTGCTAC
GACCGACCGAATGACGGGTGCGACCCGAGGAAGGGCGGCGCGGACTGCATCGGCGTCTGTCTGGAGTAG
Transcript >Hirsu2|3424
ATGCTCTCGAGCTCTATCCTCGCCCTCGCAGCCGCTGCCCTAGCCGGCTTCGGCGCCGCAGAGCCCGCTGCCAGG
GGCCGACCTTGCGGGCTGAAGATCGCTCCCTGCCCGGGGAACCAGATCTGCATCCCCGACTCGTTGGACTGCGAA
GACCTCAACCGGTGCAAGGGCACCTGCCGGAAGAGGTACCAGTCGTGCGGCGGCTTCCGGGTCAAGCCGCTCGAG
TGCCCCAAGGGCTTCTCGTGCAAGGACGACCCCCGACTGCCGCCCAACTGCGGCCTGGCCTGCGACCGGCCCGGC
ATCTGCATCCCCGACAAGGCGCCCGCCTGCTCTGGCCTCGCGGGCAAGCGGTGCCCCAGGGGCCTCGACTGCTAC
GACCGACCGAATGACGGGTGCGACCCGAGGAAGGGCGGCGCGGACTGCATCGGCGTCTGTCTGGAGTAG
Gene >Hirsu2|3424
ATGCTCTCGAGCTCTATCCTCGCCCTCGCAGCCGCTGCCCTAGCCGGCTTCGGCGCCGCAGAGCCCGCTGCCAGG
GGCCGACCTTGCGGGCTGAAGATCGCTCCCTGCCCGGGGAACCAGATCTGCATCCCCGACTCGTTGGACTGCGAA
GACCTCAACCGGTGCAAGGGCACCTGCCGGAAGAGGTACCAGTCGTGCGGCGGCTTCCGGGTCAAGCCGCTCGAG
TGCCCCAAGGGCTTCTCGTGCAAGGACGACCCCCGACTGCCGCCCAACTGCGGCCTGGCCTGCGACCGGCCCGGC
ATCTGCATCCCCGACAAGGCGCCCGCCTGCTCTGGCCTCGCGGGCAAGCGGTGCCCCAGGGGCCTCGACTGCTAC
GACCGACCGAATGACGGGTGCGACCCGAGGAAGGGCGGCGCGGACTGCATCGGCGTCTGTCTGGAGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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