Protein ID | Hirsu2|3419 |
Gene name | |
Location | Contig_19:2951..4182 |
Strand | - |
Gene length (bp) | 1231 |
Transcript length (bp) | 1152 |
Coding sequence length (bp) | 1152 |
Protein length (aa) | 384 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.1347 | 0.0496 | 0.9356 | 0.1481 | 0.1376 | 0.0222 | 0.1832 | 0.269 | 0.1464 | 0.0183 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 21 | 0.991358 |
Orthofinder run ID | 4 |
Orthogroup | 98 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Hirsu2|3419 MLSHLILTSLLTASLGGASEAQSLAASGECAVSASGCTVSPGDKVVSSFQMYPENGEPDDKRCRICFSAVYNSTV VCWGPADNKTEVLNVSGLSGRPELHASGVRIDSSGDNLYIMINAGDAFVTQGKNIKGENNLVKWNLNEPDQEKAK ECVVNLSEFTDGAFGGFQDMAFSKDGKVFIISTFPAGIFIADADCGNVRKWWSGPNTDPTIAGLAGLARYGDNAM VVLDATVPGGQLLRFDDTTAETGTDHKIEIRAAEPGGNTSFGAILEAMSLPAKYGGKVALLSSNQDGTHVCRTSD DWRSADFLGTIPNPLTASEGASTVAAVEAGGRIFRVNEYFNDVNETVPNTLAGPRSDFPLQDITDSIDKLLERPP TPSSCQGS* |
Coding | >Hirsu2|3419 ATGCTTTCCCATCTTATACTCACCTCACTTCTGACGGCCTCGCTCGGAGGAGCCAGCGAGGCTCAGAGCTTGGCG GCCTCGGGCGAGTGTGCCGTCAGCGCCAGCGGGTGTACCGTCAGCCCCGGCGACAAGGTCGTCTCGTCTTTCCAG ATGTATCCGGAGAATGGGGAACCCGACGACAAGAGGTGCCGCATCTGCTTCAGCGCCGTGTACAACTCGACCGTC GTCTGCTGGGGCCCCGCGGATAACAAGACGGAAGTCCTCAACGTTTCCGGGCTCAGCGGCAGGCCCGAGCTGCAC GCCAGCGGCGTCCGAATCGACTCGAGCGGGGACAACCTCTACATCATGATCAACGCCGGAGACGCCTTCGTGACT CAGGGGAAAAACATAAAGGGCGAAAACAACCTCGTCAAGTGGAACCTGAACGAGCCGGACCAAGAGAAGGCGAAG GAGTGCGTGGTCAACCTCAGCGAGTTCACGGACGGCGCCTTCGGAGGCTTCCAGGACATGGCGTTCAGCAAGGAC GGCAAGGTCTTCATCATCAGCACCTTTCCGGCGGGCATCTTCATAGCCGACGCCGACTGCGGCAACGTTCGGAAG TGGTGGTCGGGCCCGAACACGGATCCGACCATCGCCGGGCTGGCCGGGCTGGCCAGGTACGGCGACAACGCCATG GTCGTCCTGGACGCGACCGTGCCGGGCGGGCAGTTGCTCCGCTTCGACGACACGACGGCCGAGACGGGCACCGAC CACAAGATCGAGATCCGCGCGGCCGAGCCCGGCGGCAACACCAGCTTCGGCGCCATCCTGGAGGCCATGTCGCTG CCGGCCAAGTACGGGGGCAAGGTGGCGCTGTTGTCCAGCAACCAGGACGGCACCCACGTGTGCCGCACGTCGGAC GACTGGCGCAGCGCCGACTTTCTCGGGACCATCCCCAACCCGCTGACGGCGTCGGAAGGGGCGTCGACCGTGGCC GCGGTCGAGGCCGGGGGCCGCATCTTTCGCGTCAACGAGTACTTCAACGACGTCAACGAGACGGTGCCCAACACG CTTGCCGGGCCGAGGAGCGACTTTCCGCTGCAGGACATCACAGACAGCATCGACAAGCTGCTCGAGCGCCCCCCG ACTCCAAGTTCGTGTCAGGGGAGTTGA |
Transcript | >Hirsu2|3419 ATGCTTTCCCATCTTATACTCACCTCACTTCTGACGGCCTCGCTCGGAGGAGCCAGCGAGGCTCAGAGCTTGGCG GCCTCGGGCGAGTGTGCCGTCAGCGCCAGCGGGTGTACCGTCAGCCCCGGCGACAAGGTCGTCTCGTCTTTCCAG ATGTATCCGGAGAATGGGGAACCCGACGACAAGAGGTGCCGCATCTGCTTCAGCGCCGTGTACAACTCGACCGTC GTCTGCTGGGGCCCCGCGGATAACAAGACGGAAGTCCTCAACGTTTCCGGGCTCAGCGGCAGGCCCGAGCTGCAC GCCAGCGGCGTCCGAATCGACTCGAGCGGGGACAACCTCTACATCATGATCAACGCCGGAGACGCCTTCGTGACT CAGGGGAAAAACATAAAGGGCGAAAACAACCTCGTCAAGTGGAACCTGAACGAGCCGGACCAAGAGAAGGCGAAG GAGTGCGTGGTCAACCTCAGCGAGTTCACGGACGGCGCCTTCGGAGGCTTCCAGGACATGGCGTTCAGCAAGGAC GGCAAGGTCTTCATCATCAGCACCTTTCCGGCGGGCATCTTCATAGCCGACGCCGACTGCGGCAACGTTCGGAAG TGGTGGTCGGGCCCGAACACGGATCCGACCATCGCCGGGCTGGCCGGGCTGGCCAGGTACGGCGACAACGCCATG GTCGTCCTGGACGCGACCGTGCCGGGCGGGCAGTTGCTCCGCTTCGACGACACGACGGCCGAGACGGGCACCGAC CACAAGATCGAGATCCGCGCGGCCGAGCCCGGCGGCAACACCAGCTTCGGCGCCATCCTGGAGGCCATGTCGCTG CCGGCCAAGTACGGGGGCAAGGTGGCGCTGTTGTCCAGCAACCAGGACGGCACCCACGTGTGCCGCACGTCGGAC GACTGGCGCAGCGCCGACTTTCTCGGGACCATCCCCAACCCGCTGACGGCGTCGGAAGGGGCGTCGACCGTGGCC GCGGTCGAGGCCGGGGGCCGCATCTTTCGCGTCAACGAGTACTTCAACGACGTCAACGAGACGGTGCCCAACACG CTTGCCGGGCCGAGGAGCGACTTTCCGCTGCAGGACATCACAGACAGCATCGACAAGCTGCTCGAGCGCCCCCCG ACTCCAAGTTCGTGTCAGGGGAGTTGA |
Gene | >Hirsu2|3419 ATGCTTTCCCATCTTATACTCACCTCACTTCTGACGGCCTCGCTCGGAGGAGCCAGCGAGGCTCAGAGCTTGGCG GCCTCGGGCGAGTGTGCCGTCAGCGCCAGCGGGTGTACCGTCAGCCCCGGCGACAAGGTCGTCTCGTCTTTCCAG ATGTATCCGGAGAATGGGGAACCCGACGACAAGAGGTGCCGCATCTGCTTCAGGTGAGAGAACGCGCCCTTCTCG CTCATACTCGGCGGCGAAGGCTTGATGGGGTTCGGGCCCGGCTTACACGCGGGACAGCGCCGTGTACAACTCGAC CGTCGTCTGCTGGGGCCCCGCGGATAACAAGACGGAAGTCCTCAACGTTTCCGGGCTCAGCGGCAGGCCCGAGCT GCACGCCAGCGGCGTCCGAATCGACTCGAGCGGGGACAACCTCTACATCATGATCAACGCCGGAGACGCCTTCGT GACTCAGGGGAAAAACATAAAGGGCGAAAACAACCTCGTCAAGTGGAACCTGAACGAGCCGGACCAAGAGAAGGC GAAGGAGTGCGTGGTCAACCTCAGCGAGTTCACGGACGGCGCCTTCGGAGGCTTCCAGGACATGGCGTTCAGCAA GGACGGCAAGGTCTTCATCATCAGCACCTTTCCGGCGGGCATCTTCATAGCCGACGCCGACTGCGGCAACGTTCG GAAGTGGTGGTCGGGCCCGAACACGGATCCGACCATCGCCGGGCTGGCCGGGCTGGCCAGGTACGGCGACAACGC CATGGTCGTCCTGGACGCGACCGTGCCGGGCGGGCAGTTGCTCCGCTTCGACGACACGACGGCCGAGACGGGCAC CGACCACAAGATCGAGATCCGCGCGGCCGAGCCCGGCGGCAACACCAGCTTCGGCGCCATCCTGGAGGCCATGTC GCTGCCGGCCAAGTACGGGGGCAAGGTGGCGCTGTTGTCCAGCAACCAGGACGGCACCCACGTGTGCCGCACGTC GGACGACTGGCGCAGCGCCGACTTTCTCGGGACCATCCCCAACCCGCTGACGGCGTCGGAAGGGGCGTCGACCGT GGCCGCGGTCGAGGCCGGGGGCCGCATCTTTCGCGTCAACGAGTACTTCAACGACGTCAACGAGACGGTGCCCAA CACGCTTGCCGGGCCGAGGAGCGACTTTCCGCTGCAGGACATCACAGACAGCATCGACAAGCTGCTCGAGCGCCC CCCGACTCCAAGTTCGTGTCAGGGGAGTTGA |