© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3417 |
| Gene name | |
| Location | Contig_19:7..692 |
| Strand | - |
| Gene length (bp) | 685 |
| Transcript length (bp) | 372 |
| Coding sequence length (bp) | 372 |
| Protein length (aa) | 124 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF04828 | GFA | Glutathione-dependent formaldehyde-activating enzyme | 4.6E-17 | 26 | 114 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016846 | carbon-sulfur lyase activity | Yes |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016829 | lyase activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Nuclear localization signal | 0.8037 | 0.2673 | 0.0733 | 0.0314 | 0.1112 | 0.0131 | 0.0804 | 0.141 | 0.1155 | 0.0102 |
| Orthofinder run ID | 4 |
| Orthogroup | 9344 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3417 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3417 MASQKGRCNCGSVTVSLRSSPAEAAACHCLNCRRTGGACSVNYLVDESEADVDDKQGQLKEYRDSDTKSGNTVTR SFCQTCGSAVVTKSLKFPGKLFLKASLFDKVAPVKREVYTEDRIDWEI* |
| Coding | >Hirsu2|3417 ATGGCGTCCCAGAAGGGCCGCTGCAACTGCGGCTCCGTCACCGTCTCGCTCCGCTCCAGCCCGGCCGAGGCCGCG GCCTGCCACTGCCTGAACTGTCGTCGTACTGGGGGAGCCTGCTCGGTGAATTACCTGGTGGACGAGAGCGAGGCG GACGTGGACGACAAGCAAGGCCAGCTCAAAGAGTACCGGGACAGCGACACCAAGTCGGGCAACACGGTGACCCGA TCGTTCTGTCAAACCTGCGGGAGCGCCGTCGTCACCAAGTCGCTCAAGTTCCCGGGGAAGCTGTTCCTTAAGGCC TCGCTCTTCGACAAGGTGGCGCCGGTGAAGCGGGAGGTTTATACGGAGGACAGGATCGACTGGGAGATCTGA |
| Transcript | >Hirsu2|3417 ATGGCGTCCCAGAAGGGCCGCTGCAACTGCGGCTCCGTCACCGTCTCGCTCCGCTCCAGCCCGGCCGAGGCCGCG GCCTGCCACTGCCTGAACTGTCGTCGTACTGGGGGAGCCTGCTCGGTGAATTACCTGGTGGACGAGAGCGAGGCG GACGTGGACGACAAGCAAGGCCAGCTCAAAGAGTACCGGGACAGCGACACCAAGTCGGGCAACACGGTGACCCGA TCGTTCTGTCAAACCTGCGGGAGCGCCGTCGTCACCAAGTCGCTCAAGTTCCCGGGGAAGCTGTTCCTTAAGGCC TCGCTCTTCGACAAGGTGGCGCCGGTGAAGCGGGAGGTTTATACGGAGGACAGGATCGACTGGGAGATCTGA |
| Gene | >Hirsu2|3417 ATGGCGTCCCAGAAGGGCCGCTGCAACTGCGGCTCCGTCACCGTCTCGCTCCGCTCCAGCCCGGCCGAGGCCGCG GCCTGCCACTGGTAAGCCGAGCGGCGCTGCAAGCTCAATGGCAAGGGGGGACGATGTTTGCTGAAGCGTCGTGTG ACCAGCCTGAACTGTCGTCGTACTGGGGGAGGTACGCAAAGCCGCTTCCCGTCCGGGGAAGTTCCAAATCCATGG AACGGAAAAGTACGCCGGTGCTGATCGTTTGCCGTGCTGGCGGCCGGCCCAGCCTGCTCGGTGAATTACCTGGTG GACGAGAGCGAGGCGGACGTGGACGACAAGCAAGGCCAGCTCAAAGAGTACCGGGACAGCGACACCAAGTCGGGC AACACGGTGACCGTACGCCCAAGGGCCCCCTCCCGGTTCGCGCCGAGCTGGCTGACAGAGGGATGCGATGCGGCG CAGCGATCGTTCTGTCAAACCTGCGGGAGGTACGCAGTCCCGTGCCCCCAGCTCTGGAGGGAGACAGGTGAAAAA AATAAGGGGGAGGGGGGCTGCTGACGAGGACAAAAGCGCCGTCGTCACCAAGTCGCTCAAGTTCCCGGGGAAGCT GTTCCTTAAGGCCTCGCTCTTCGACAAGGTGGCGCCGGTGAAGCGGGAGGTTTATACGGAGGACAGGATCGACTG GGAGATCTGA |