© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3414 |
| Gene name | |
| Location | Contig_1898:1810..3807 |
| Strand | - |
| Gene length (bp) | 1997 |
| Transcript length (bp) | 1263 |
| Coding sequence length (bp) | 1263 |
| Protein length (aa) | 421 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | 0.4615 | 0.5563 | 0.3919 | 0.0857 | 0.317 | 0.0561 | 0.1551 | 0.142 | 0.3004 | 0.0254 |
| Orthofinder run ID | 4 |
| Orthogroup | 9342 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3414 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3414 MADLPQQLHHGDSHPHRRPASCPGRRSASALERGPTVAERAAGPIAWLGQQAAGPACPRDPLRSVLGLETKKKGA GSRRGKGGGGRQARCRPGPVKPKLGLHGDTSLRFHLHAVVPMYDALAKGVESRARRVPQGGACRRLYLATTTAAA MRPRTHTYVCTYMSVPERRIGRHAHPRLGHEVGVGRAGPRRPTRSRNRLSHSPTPTQRGRSRHRMGLRAGKDGQM TSGQPRAAFAAAAWGAGGTAPRCPELRAGTADAARRSPRGVVQGGPVRRQSVRGTWPGDGLLVSATLLEREREAG VGLEAVALLRGASLFSLPRRDPAAWGGWSGHPPPSHAVAGDAAPFLVFGRTYMRMLLLEAPVMYALPAPCPEATG AFVRSINGSPLALPDPFLLPSALLEAGAERARAGKEAGRQAADGR* |
| Coding | >Hirsu2|3414 ATGGCAGATCTGCCACAGCAGCTGCACCATGGCGATTCGCACCCACACCGCCGTCCCGCTAGCTGCCCGGGTAGA CGTTCTGCATCGGCCCTCGAGCGCGGGCCGACGGTTGCGGAACGCGCCGCCGGCCCCATCGCTTGGCTCGGTCAG CAGGCGGCCGGCCCTGCCTGTCCTCGTGACCCCCTCCGGTCCGTCTTGGGCCTCGAGACGAAGAAGAAAGGCGCA GGCTCCCGCCGGGGCAAGGGGGGGGGGGGACGACAGGCCCGATGTCGTCCCGGCCCGGTCAAGCCAAAGCTCGGG CTGCATGGAGACACATCCCTACGTTTCCATCTACATGCTGTCGTGCCCATGTACGATGCGCTCGCCAAGGGAGTC GAGTCCCGCGCCCGGCGTGTTCCCCAGGGCGGCGCGTGCCGGCGCCTCTACCTCGCGACGACGACGGCGGCGGCG ATGCGTCCACGAACACATACATACGTATGCACATACATGAGTGTTCCAGAGCGGAGAATCGGCAGGCATGCGCAC CCCCGTCTCGGCCACGAGGTCGGCGTTGGACGCGCCGGGCCGCGGCGGCCGACACGAAGCAGAAACCGCCTCTCA CACTCTCCCACCCCCACACAAAGGGGCCGCTCCCGCCATCGGATGGGACTCAGGGCAGGCAAAGACGGCCAGATG ACAAGCGGGCAGCCCCGGGCGGCATTTGCTGCTGCGGCGTGGGGCGCGGGCGGTACCGCTCCGCGCTGCCCAGAG CTCCGGGCCGGTACAGCGGACGCGGCACGGCGGTCCCCCCGCGGTGTCGTGCAGGGCGGCCCGGTACGCCGCCAG TCGGTACGCGGTACCTGGCCCGGCGACGGCCTCCTCGTCAGCGCTACCTTGCTCGAGAGAGAGAGAGAGGCCGGA GTGGGCTTGGAGGCTGTAGCCCTCCTCCGTGGCGCCTCTCTTTTCTCCCTCCCTCGCCGGGACCCTGCGGCCTGG GGAGGCTGGAGCGGGCACCCCCCCCCCTCTCATGCGGTGGCGGGAGATGCCGCACCCTTCCTGGTGTTCGGTCGT ACCTACATGCGAATGCTACTGCTCGAGGCACCGGTCATGTACGCACTTCCGGCTCCCTGCCCGGAGGCCACGGGA GCGTTCGTGCGATCGATCAATGGCTCGCCCCTCGCCCTGCCGGACCCTTTCCTCCTTCCCTCGGCCCTGCTCGAG GCCGGAGCAGAGCGAGCCCGGGCAGGCAAGGAGGCGGGCAGGCAAGCCGCCGACGGTAGATGA |
| Transcript | >Hirsu2|3414 ATGGCAGATCTGCCACAGCAGCTGCACCATGGCGATTCGCACCCACACCGCCGTCCCGCTAGCTGCCCGGGTAGA CGTTCTGCATCGGCCCTCGAGCGCGGGCCGACGGTTGCGGAACGCGCCGCCGGCCCCATCGCTTGGCTCGGTCAG CAGGCGGCCGGCCCTGCCTGTCCTCGTGACCCCCTCCGGTCCGTCTTGGGCCTCGAGACGAAGAAGAAAGGCGCA GGCTCCCGCCGGGGCAAGGGGGGGGGGGGACGACAGGCCCGATGTCGTCCCGGCCCGGTCAAGCCAAAGCTCGGG CTGCATGGAGACACATCCCTACGTTTCCATCTACATGCTGTCGTGCCCATGTACGATGCGCTCGCCAAGGGAGTC GAGTCCCGCGCCCGGCGTGTTCCCCAGGGCGGCGCGTGCCGGCGCCTCTACCTCGCGACGACGACGGCGGCGGCG ATGCGTCCACGAACACATACATACGTATGCACATACATGAGTGTTCCAGAGCGGAGAATCGGCAGGCATGCGCAC CCCCGTCTCGGCCACGAGGTCGGCGTTGGACGCGCCGGGCCGCGGCGGCCGACACGAAGCAGAAACCGCCTCTCA CACTCTCCCACCCCCACACAAAGGGGCCGCTCCCGCCATCGGATGGGACTCAGGGCAGGCAAAGACGGCCAGATG ACAAGCGGGCAGCCCCGGGCGGCATTTGCTGCTGCGGCGTGGGGCGCGGGCGGTACCGCTCCGCGCTGCCCAGAG CTCCGGGCCGGTACAGCGGACGCGGCACGGCGGTCCCCCCGCGGTGTCGTGCAGGGCGGCCCGGTACGCCGCCAG TCGGTACGCGGTACCTGGCCCGGCGACGGCCTCCTCGTCAGCGCTACCTTGCTCGAGAGAGAGAGAGAGGCCGGA GTGGGCTTGGAGGCTGTAGCCCTCCTCCGTGGCGCCTCTCTTTTCTCCCTCCCTCGCCGGGACCCTGCGGCCTGG GGAGGCTGGAGCGGGCACCCCCCCCCCTCTCATGCGGTGGCGGGAGATGCCGCACCCTTCCTGGTGTTCGGTCGT ACCTACATGCGAATGCTACTGCTCGAGGCACCGGTCATGTACGCACTTCCGGCTCCCTGCCCGGAGGCCACGGGA GCGTTCGTGCGATCGATCAATGGCTCGCCCCTCGCCCTGCCGGACCCTTTCCTCCTTCCCTCGGCCCTGCTCGAG GCCGGAGCAGAGCGAGCCCGGGCAGGCAAGGAGGCGGGCAGGCAAGCCGCCGACGGTAGATGA |
| Gene | >Hirsu2|3414 ATGGCAGATCTGCCACAGCAGCTGCACCATGGCGATTCGCACCCACACCGCCGTCCCGCTAGCTGCCCGGGTAGG TAGGTAGTAGGGAGAGAGGCAGACGGGGAGGAGTAAAGCAGTAGGTGCCAGCAGCAGGAGGAAGCCATCCAGGGT AGACGGCCGACTTGCACCGCCGACGACCGGTCGGCCCCCCCTCCGTTGTTTGCTGCCCTCTGCGTTGCATCTAGC CATGTATCGACACATGTCCCTACAGTGCATACATACATACATACGTGCGTACGTACGTAACGTACTGCAGACGTT CTGCATCGGCCCTCGAGCGCGGGCCGACGGTTGCGGAACGCGCCGCCGGCCCCATCGCTTGGCTCGGTCAGCAGG CGGCCGGCCCTGCCTGTCCTCGTGACCCCCTCCGGTCCGTCTTGGGCCTCGAGACGAAGAAGAAAGGCGCAGGCT CCCGCCGGGGCAAGGGGGGGGGGGGACGACAGGCCCGATGTCGTCCCGGCCCGGTCAAGCCAAAGCTCGGGCTGC ATGGAGACACATCCCTACGTTTCCATCTACATGCTGTCGGTGCGTACAAGCAGGGGGCATGGATATGTCCACATC TACCTACCTAGCTCGCTCCCACGTACAGTGCCCATGTACGATGCGCTCGCCAAGGGAGTCGAGTCCCGCGCCCGG CGTGTTCCCCAGGGCGGCGCGTGCCGGCGCCTCTACCTCGCGACGACGACGGCGGCGGCGATGCGTCCACGAACA CATACATACGTATGCACATACATGAGTGTTCCAGAGCGGAGAATCGGCAGGCATGCGCACCCCCGTCTCGGCCAC GAGGTCGGCGTTGGACGCGCCGGGCCGCGGCGGCCGACACGAAGCAGAAACCGCCTCTCACACTCTCCCACCCCC ACACAAAGGGGCCGCTCCCGCCATCGGATGGGACTCAGGGCAGGCAAAGACGGCCAGATGACAAGCGGGCGTGCG TCGCCGCCGCGCCCAATCCGAAATCCCCGCCAACGCCACCAGCACTAGCATCGTTCCCCGGGGGGCCGGTCCGCG CCTCCCGCCCGCGCCGTGGGGCGGACGAATCATCCTCGCCGCCTGCCCATCTCGGCCCCTTTTTCATCTTCAAGC GATGAAAATATCAATGACAATACCAAGAGTAACGATGATGCTGTCTTCTTTTTCTGTCTTTCATCTGTCATCTGC TTCAAGCCCTCTCCTTGCTCCCGTCCTCCTCGTGTCTTCTTCCCCCCCTCCCCCCCCTGGCCGCCCACGCGAGCA TGTGGCCCGTAGGCTGGCGGTAACGTGCTGGTCGCCGCTCGGCCTTTTCCGCTGGAAACAGGCCGCGCGGGAAAG GTGATCCCTGCTGGCCCTCGCTCCATCACGTTTTCTTGTTTGTCGGATGCAGCCTCCGTCGGGCGACAGAGCCCC GGGCGGCATTTGCTGCTGCGGCGTGGGGCGCGGGCGGTACCGCTCCGCGCTGCCCAGAGCTCCGGGCCGGTACAG CGGACGCGGCACGGCGGTCCCCCCGCGGTGTCGTGCAGGGCGGCCCGGTACGCCGCCAGTCGGTACGCGGTACCT GGCCCGGCGACGGCCTCCTCGTCAGCGCTACCTTGCTCGAGAGAGAGAGAGAGGCCGGAGTGGGCTTGGAGGCTG TAGCCCTCCTCCGTGGCGCCTCTCTTTTCTCCCTCCCTCGCCGGGACCCTGCGGCCTGGGGAGGCTGGAGCGGGC ACCCCCCCCCCTCTCATGCGGTGGCGGGAGATGCCGCACCCTTCCTGGTGTTCGGTCGTACCTACATGCGAATGC TACTGCTCGAGGCACCGGTCATGTACGCACTTCCGGCTCCCTGCCCGGAGGCCACGGGAGCGTTCGTGCGATCGA TCAATGGCTCGCCCCTCGCCCTGCCGGACCCTTTCCTCCTTCCCTCGGCCCTGCTCGAGGCCGGAGCAGAGCGAG CCCGGGCAGGCAAGGAGGCGGGCAGGCAAGCCGCCGACGGTAGATGA |