© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3413 |
| Gene name | |
| Location | Contig_1897:2983..4443 |
| Strand | + |
| Gene length (bp) | 1460 |
| Transcript length (bp) | 1413 |
| Coding sequence length (bp) | 1413 |
| Protein length (aa) | 471 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.2936 | 0.9495 | 0.1058 | 0.0166 | 0.0373 | 0.0013 | 0.0242 | 0.0134 | 0.0061 | 0.0025 |
| Orthofinder run ID | 4 |
| Orthogroup | 2411 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3413 MADGDECADAASASASASDRSCTPKTVAYLDFRHLNVNKNSPSDEAEVESELSDPDSNLHSPPAAGVPEFDEIVV GADRGGSGSSPPRPASTDQDQEMDDVRDESSTASHYPKRKRTSLYNDLSETKMEISQSQPAADERTPLVARDVKS RPSRQSLGGVKGVMLGHWRDSNVPDGSRKHAVIGFIDVRDRLRTRIQPQTKDGESLLEDYPLPPGPGGSWVTFEK VVFSEHLVGLDHFQIKEYTRIRSLAAPEETDEERKAAELEAVKEAVRRVKENPASDNPIASPAIAYGTDAPEHLS TPGRPDIKRRKVSGGYAPGTATPSEGSAPDQARSQTPPQPMAAHQTRFSIDPLPGTRPTRILLGFWKPSSEPDPK DRHAVYGILGQNDMFRVKVVRETRDGRFVDGNFPAGAGALWIPYEEVEFNDHLKALNRQEIKEYCRIRQYQMDHG ELKDERIENETKAQRQRADV* |
| Coding | >Hirsu2|3413 ATGGCCGATGGCGACGAGTGCGCCGACGCGGCCTCGGCCTCGGCCTCGGCTTCGGACCGCTCGTGTACCCCGAAA ACAGTTGCTTACCTGGACTTCAGGCATTTAAACGTCAACAAGAACAGCCCCTCTGACGAGGCCGAGGTGGAGAGC GAACTCAGCGATCCCGACAGCAATCTGCACTCGCCCCCGGCTGCCGGCGTCCCCGAGTTCGACGAGATCGTCGTC GGCGCAGATCGTGGCGGCTCGGGCTCCTCGCCGCCCCGTCCCGCCTCCACGGACCAGGACCAGGAGATGGACGAT GTCCGGGATGAGTCGTCGACCGCCTCTCACTACCCCAAGCGCAAGCGGACATCGCTCTACAATGACTTGAGCGAA ACCAAGATGGAGATATCTCAGTCTCAGCCTGCCGCCGACGAACGGACGCCCCTCGTGGCCAGGGACGTCAAGTCC AGGCCCAGCCGCCAGAGCCTCGGCGGCGTCAAGGGCGTCATGCTCGGCCACTGGAGAGATTCCAATGTGCCGGAC GGGAGCAGGAAGCACGCCGTCATCGGCTTCATCGACGTCCGCGACCGTCTGCGCACCCGCATCCAGCCACAGACC AAGGACGGCGAATCCCTGCTCGAGGACTACCCTCTGCCCCCGGGGCCCGGCGGCAGCTGGGTCACGTTTGAAAAG GTTGTCTTCTCGGAACACCTGGTCGGCCTGGACCACTTCCAGATCAAGGAGTACACCCGGATCCGCTCCCTCGCC GCGCCCGAGGAGACGGACGAGGAGCGCAAGGCGGCCGAGCTCGAGGCCGTCAAGGAGGCCGTGCGCCGCGTCAAG GAGAACCCCGCCTCGGACAACCCCATCGCCTCGCCCGCCATCGCCTACGGCACCGACGCGCCCGAGCACCTCTCG ACGCCCGGCCGCCCCGACATCAAGCGACGCAAGGTCAGCGGCGGCTACGCGCCGGGCACTGCCACGCCGAGCGAA GGATCTGCCCCGGACCAGGCCCGCTCGCAAACGCCTCCGCAGCCGATGGCGGCCCATCAAACCCGCTTTTCCATC GATCCTCTGCCCGGCACCCGCCCCACACGCATCCTGCTGGGTTTTTGGAAGCCGTCGAGCGAGCCCGACCCCAAG GACCGCCACGCCGTCTACGGCATCCTCGGCCAGAACGACATGTTCCGCGTCAAGGTCGTGCGGGAGACGAGGGAC GGCCGCTTCGTGGACGGCAACTTCCCCGCGGGGGCCGGGGCCCTCTGGATCCCGTACGAGGAGGTCGAGTTCAAC GACCACCTCAAGGCCCTCAACCGCCAGGAGATTAAGGAGTACTGTCGCATCCGTCAATATCAGATGGACCACGGC GAGCTCAAGGACGAGCGCATCGAGAACGAGACCAAGGCCCAACGTCAACGTGCCGACGTTTAG |
| Transcript | >Hirsu2|3413 ATGGCCGATGGCGACGAGTGCGCCGACGCGGCCTCGGCCTCGGCCTCGGCTTCGGACCGCTCGTGTACCCCGAAA ACAGTTGCTTACCTGGACTTCAGGCATTTAAACGTCAACAAGAACAGCCCCTCTGACGAGGCCGAGGTGGAGAGC GAACTCAGCGATCCCGACAGCAATCTGCACTCGCCCCCGGCTGCCGGCGTCCCCGAGTTCGACGAGATCGTCGTC GGCGCAGATCGTGGCGGCTCGGGCTCCTCGCCGCCCCGTCCCGCCTCCACGGACCAGGACCAGGAGATGGACGAT GTCCGGGATGAGTCGTCGACCGCCTCTCACTACCCCAAGCGCAAGCGGACATCGCTCTACAATGACTTGAGCGAA ACCAAGATGGAGATATCTCAGTCTCAGCCTGCCGCCGACGAACGGACGCCCCTCGTGGCCAGGGACGTCAAGTCC AGGCCCAGCCGCCAGAGCCTCGGCGGCGTCAAGGGCGTCATGCTCGGCCACTGGAGAGATTCCAATGTGCCGGAC GGGAGCAGGAAGCACGCCGTCATCGGCTTCATCGACGTCCGCGACCGTCTGCGCACCCGCATCCAGCCACAGACC AAGGACGGCGAATCCCTGCTCGAGGACTACCCTCTGCCCCCGGGGCCCGGCGGCAGCTGGGTCACGTTTGAAAAG GTTGTCTTCTCGGAACACCTGGTCGGCCTGGACCACTTCCAGATCAAGGAGTACACCCGGATCCGCTCCCTCGCC GCGCCCGAGGAGACGGACGAGGAGCGCAAGGCGGCCGAGCTCGAGGCCGTCAAGGAGGCCGTGCGCCGCGTCAAG GAGAACCCCGCCTCGGACAACCCCATCGCCTCGCCCGCCATCGCCTACGGCACCGACGCGCCCGAGCACCTCTCG ACGCCCGGCCGCCCCGACATCAAGCGACGCAAGGTCAGCGGCGGCTACGCGCCGGGCACTGCCACGCCGAGCGAA GGATCTGCCCCGGACCAGGCCCGCTCGCAAACGCCTCCGCAGCCGATGGCGGCCCATCAAACCCGCTTTTCCATC GATCCTCTGCCCGGCACCCGCCCCACACGCATCCTGCTGGGTTTTTGGAAGCCGTCGAGCGAGCCCGACCCCAAG GACCGCCACGCCGTCTACGGCATCCTCGGCCAGAACGACATGTTCCGCGTCAAGGTCGTGCGGGAGACGAGGGAC GGCCGCTTCGTGGACGGCAACTTCCCCGCGGGGGCCGGGGCCCTCTGGATCCCGTACGAGGAGGTCGAGTTCAAC GACCACCTCAAGGCCCTCAACCGCCAGGAGATTAAGGAGTACTGTCGCATCCGTCAATATCAGATGGACCACGGC GAGCTCAAGGACGAGCGCATCGAGAACGAGACCAAGGCCCAACGTCAACGTGCCGACGTTTAG |
| Gene | >Hirsu2|3413 ATGGCCGATGGCGACGAGTGCGCCGACGCGGCCTCGGCCTCGGCCTCGGCTTCGGACCGCTCGTGTACCCCGAAA ACAGTTGCTTACCTGGACTTCAGGCATTTAAACGTCAACAAGAACAGCCCCTCTGACGAGGCCGAGGTGGAGAGC GAACTCAGCGATCCCGACAGCAATCTGCACTCGCCCCCGGCTGCCGGCGTCCCCGAGTTCGACGAGATCGTCGTC GGCGCAGATCGTGGCGGCTCGGGCTCCTCGCCGCCCCGTCCCGCCTCCACGGACCAGGACCAGGAGATGGACGAT GTCCGGGATGAGTCGTCGACCGCCTCTCACTACCCCAAGCGCAAGCGGACATCGCTCTACAATGACTTGAGCGAA ACCAAGATGGAGATATCTCAGTCTCAGCCTGCCGCCGACGAACGGACGCCCCTCGTGGCCAGGGACGTCAAGTCC AGGCCCAGCCGCCAGAGCCTCGGCGGCGTCAAGGGCGTCATGCTCGGCCACTGGAGAGATTCCAATGTGCCGGAC GGGAGCAGGAAGCACGCCGTCATCGGCTTCATCGACGTCCGCGACCGTCTGCGCACCCGCATCCAGCCACAGACC AAGGACGGCGAATCCCTGCTCGAGGACTACCCTCTGCCCCCGGGGCCCGGCGGCAGCTGGGTCACGTTTGAAAAG GTTGTCTTCTCGGAACACCTGGTCGGCCTGGACCACTTCCAGATCAAGGAGTACACCCGGATCCGCTCCCTCGCC GCGCCCGAGGAGACGGACGAGGAGCGCAAGGCGGCCGAGCTCGAGGCCGTCAAGGAGGCCGTGCGCCGCGTCAAG GAGAACCCCGCCTCGGACAACCCCATCGCCTCGCCCGCCATCGCCTACGGCACCGACGCGCCCGAGCACCTCTCG ACGCCCGGCCGCCCCGACATCAAGCGACGCAAGGTCAGCGGCGGCTACGCGCCGGGCACTGCCACGCCGAGCGAA GGATCTGCCCCGGACCAGGCCCGCTCGCAAACGCCTCCGCAGCCGATGGCGGCCCATCAAACCCGCTTTTCCATC GATCCTCTGCCCGGCACCCGCCCCACACGCATCCTGCTGGGTTTTTGGAAGCCGTCGAGCGAGCCCGACCCCAAG GACCGCCACGCCGTCTACGGCATCCTCGGCCAGAACGACATGTTCCGCGTCAAGGTCGTGCGGGAGACGAGGGAC GGCCGCTTCGTGGACGGCAACTTCCCCGCGGGGGCCGGGGCCCTCTGGATCCCGTACGAGGAGGTCGAGTTCAAC GACCACCTCAAGGCCCTCAACCGCCAGGAGATTAAGGAGTACTGTCGCATCCGTCAATATCAGATGGACCACGGC GAGCTCAAGGACGAGCGCATCGAGAACGAGACCAAGGCCGTCTTCGAGGCGCAGACGCGCGCCGGCTCGCTCTTC AAGCAGCCCAGCAACGTCAACGTGCCGACGTTTAG |