© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3412 |
| Gene name | |
| Location | Contig_1897:539..1424 |
| Strand | + |
| Gene length (bp) | 885 |
| Transcript length (bp) | 885 |
| Coding sequence length (bp) | 885 |
| Protein length (aa) | 295 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | 0.4452 | 0.5375 | 0.2646 | 0.1216 | 0.2488 | 0.1522 | 0.1554 | 0.1535 | 0.3402 | 0.0299 |
| Orthofinder run ID | 4 |
| Orthogroup | 9341 |
| Change Orthofinder run |
| Species | Protein ID |
|---|---|
| Ophiocordyceps subramaniannii | Hirsu2|3412 (this protein) |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3412 MEEAALCDDGNRNHNNHAMSITTMTASSSLDSRLLSAATQDKAPSPAARDVASPSALAASETAAAAAAAKAAAGV GSPSLTVQRELKQLPSQPQQSPQPPPPQRDPEDLDKSAVKTAAAATTTTTTTTTTTRGQHEAAAQQQQPQAPTPP AEHELSPSQMPTKSSPARQQQPQQQQQQQQQPKNAISSVYVSSSFPLLPSLFRRAVCSVLFPFLLSASPEANWQP FAVLPTLLPCPQFPSQPQPSLVRGNHTTQAQCASSSFLFPCSLGSPAALSRVPACGAHQVERCLWRWKR* |
| Coding | >Hirsu2|3412 ATGGAAGAGGCTGCCCTCTGCGACGACGGCAACAGGAACCACAACAACCACGCCATGTCCATCACCACCATGACC GCCTCGTCCTCGCTCGACTCGAGGTTGCTGTCGGCTGCGACTCAAGACAAGGCGCCGTCGCCAGCCGCTCGCGAC GTAGCATCGCCGTCCGCCCTCGCCGCCTCGGAGACAGCCGCCGCGGCAGCGGCAGCGAAGGCCGCCGCAGGAGTG GGCTCGCCCTCCTTGACCGTCCAGAGAGAGCTGAAGCAGCTGCCATCGCAACCGCAGCAGTCGCCGCAGCCGCCG CCGCCGCAGCGCGACCCGGAGGATCTCGACAAGTCGGCCGTCAAGACGGCGGCGGCCGCCACGACAACGACGACG ACGACGACGACGACGACGAGAGGCCAGCACGAGGCGGCCGCTCAGCAGCAGCAACCGCAGGCTCCCACGCCACCG GCCGAGCACGAGCTGAGCCCGTCGCAGATGCCGACAAAGAGCTCGCCAGCCCGCCAGCAGCAGCCGCAGCAGCAA CAGCAACAGCAACAGCAACCCAAAAACGCCATCTCCTCTGTGTACGTTTCCTCTTCTTTCCCTCTCCTCCCCTCT CTTTTTCGCCGCGCTGTCTGCTCTGTTCTCTTCCCGTTTCTCTTGTCTGCCTCGCCCGAGGCCAATTGGCAACCA TTTGCCGTCCTCCCAACCCTTTTGCCCTGTCCCCAGTTTCCCTCGCAACCTCAACCGTCCTTGGTACGGGGAAAT CACACGACACAAGCGCAATGCGCCTCATCCTCCTTTCTTTTCCCTTGTTCCCTTGGCTCCCCCGCCGCCTTGAGT CGAGTGCCTGCATGTGGCGCGCACCAAGTCGAGCGCTGTCTCTGGCGCTGGAAGCGCTAG |
| Transcript | >Hirsu2|3412 ATGGAAGAGGCTGCCCTCTGCGACGACGGCAACAGGAACCACAACAACCACGCCATGTCCATCACCACCATGACC GCCTCGTCCTCGCTCGACTCGAGGTTGCTGTCGGCTGCGACTCAAGACAAGGCGCCGTCGCCAGCCGCTCGCGAC GTAGCATCGCCGTCCGCCCTCGCCGCCTCGGAGACAGCCGCCGCGGCAGCGGCAGCGAAGGCCGCCGCAGGAGTG GGCTCGCCCTCCTTGACCGTCCAGAGAGAGCTGAAGCAGCTGCCATCGCAACCGCAGCAGTCGCCGCAGCCGCCG CCGCCGCAGCGCGACCCGGAGGATCTCGACAAGTCGGCCGTCAAGACGGCGGCGGCCGCCACGACAACGACGACG ACGACGACGACGACGACGAGAGGCCAGCACGAGGCGGCCGCTCAGCAGCAGCAACCGCAGGCTCCCACGCCACCG GCCGAGCACGAGCTGAGCCCGTCGCAGATGCCGACAAAGAGCTCGCCAGCCCGCCAGCAGCAGCCGCAGCAGCAA CAGCAACAGCAACAGCAACCCAAAAACGCCATCTCCTCTGTGTACGTTTCCTCTTCTTTCCCTCTCCTCCCCTCT CTTTTTCGCCGCGCTGTCTGCTCTGTTCTCTTCCCGTTTCTCTTGTCTGCCTCGCCCGAGGCCAATTGGCAACCA TTTGCCGTCCTCCCAACCCTTTTGCCCTGTCCCCAGTTTCCCTCGCAACCTCAACCGTCCTTGGTACGGGGAAAT CACACGACACAAGCGCAATGCGCCTCATCCTCCTTTCTTTTCCCTTGTTCCCTTGGCTCCCCCGCCGCCTTGAGT CGAGTGCCTGCATGTGGCGCGCACCAAGTCGAGCGCTGTCTCTGGCGCTGGAAGCGCTAG |
| Gene | >Hirsu2|3412 ATGGAAGAGGCTGCCCTCTGCGACGACGGCAACAGGAACCACAACAACCACGCCATGTCCATCACCACCATGACC GCCTCGTCCTCGCTCGACTCGAGGTTGCTGTCGGCTGCGACTCAAGACAAGGCGCCGTCGCCAGCCGCTCGCGAC GTAGCATCGCCGTCCGCCCTCGCCGCCTCGGAGACAGCCGCCGCGGCAGCGGCAGCGAAGGCCGCCGCAGGAGTG GGCTCGCCCTCCTTGACCGTCCAGAGAGAGCTGAAGCAGCTGCCATCGCAACCGCAGCAGTCGCCGCAGCCGCCG CCGCCGCAGCGCGACCCGGAGGATCTCGACAAGTCGGCCGTCAAGACGGCGGCGGCCGCCACGACAACGACGACG ACGACGACGACGACGACGAGAGGCCAGCACGAGGCGGCCGCTCAGCAGCAGCAACCGCAGGCTCCCACGCCACCG GCCGAGCACGAGCTGAGCCCGTCGCAGATGCCGACAAAGAGCTCGCCAGCCCGCCAGCAGCAGCCGCAGCAGCAA CAGCAACAGCAACAGCAACCCAAAAACGCCATCTCCTCTGTGTACGTTTCCTCTTCTTTCCCTCTCCTCCCCTCT CTTTTTCGCCGCGCTGTCTGCTCTGTTCTCTTCCCGTTTCTCTTGTCTGCCTCGCCCGAGGCCAATTGGCAACCA TTTGCCGTCCTCCCAACCCTTTTGCCCTGTCCCCAGTTTCCCTCGCAACCTCAACCGTCCTTGGTACGGGGAAAT CACACGACACAAGCGCAATGCGCCTCATCCTCCTTTCTTTTCCCTTGTTCCCTTGGCTCCCCCGCCGCCTTGAGT CGAGTGCCTGCATGTGGCGCGCACCAAGTCGAGCGCTGTCTCTGGCGCTGGAAGCGCTAG |