© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3403 |
| Gene name | |
| Location | Contig_189:7225..8884 |
| Strand | - |
| Gene length (bp) | 1659 |
| Transcript length (bp) | 1659 |
| Coding sequence length (bp) | 1659 |
| Protein length (aa) | 553 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Extracellular | 0.1611 | 0.13 | 0.9113 | 0.4195 | 0.0456 | 0.0061 | 0.2569 | 0.1168 | 0.1699 | 0.0032 |
| Orthofinder run ID | 4 |
| Orthogroup | 6600 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3403 MPPVFDQPAAGAPGSGRKTITSTLTRTYTIASCAPTVTNCPLGKTTTEIITTSTVIRDDTGAVPRVTQAPVARLG EVVTATITRTFTITACASTVTNCPLGKVTTEVITTRTTVGSGPAAVPAVSQVSVEPLSTDRVATVTMTRTFTITG CAPTISSCPLGKVTTEVITTLTTVGAAVPTMSRASDQPLSSSKADRVATVTMTRTLTITGCALTVKNCPLGKVMT EVITTLTTIGDGAVATPTISPTSVEPLPPHNSQNADRVATITITRTLTIESCPPGVEKCPLGKVTTEVVTTQTTI RDGPVAVPTTSQASIEPLPSHNPDRAAAVTITRVYTVENCAPSVEDCPRGKVTTSVVTVMPTRAHELPEPTTAPG SGRETMTTTVTRTHTVTSCAPTVTDCPLGKVTTEVVTMTYCPGDGTRAPDPPTADPGSVSGHVPPAPVADRLPFR PGHAAFVNGSQSAPPAGNPDPNHHHQDASGTARRPSTMTAKLSAAPSVGTTGLPTADKPQPSAACLGSGCARPPP VASGAARTPSMAVWLFLLSPAAVFLLL* |
| Coding | >Hirsu2|3403 ATGCCTCCGGTGTTCGACCAGCCAGCCGCAGGAGCTCCCGGCTCCGGCAGGAAGACCATCACCTCAACCCTCACC CGGACATACACCATCGCCAGCTGCGCACCCACGGTGACAAACTGCCCCTTGGGCAAGACTACCACTGAGATCATC ACCACCTCCACTGTCATCCGTGACGACACCGGGGCCGTGCCGCGCGTCACTCAGGCTCCCGTTGCACGTCTGGGA GAGGTGGTCACGGCCACCATCACCCGGACGTTCACGATCACGGCGTGCGCGTCCACCGTCACAAACTGCCCCCTG GGCAAGGTTACCACTGAGGTTATCACGACCCGTACCACCGTTGGTAGCGGCCCTGCGGCGGTGCCAGCCGTCTCA CAGGTCTCGGTCGAGCCGCTTTCCACCGACCGAGTGGCTACCGTGACCATGACCAGGACCTTCACGATCACGGGG TGCGCGCCTACCATCTCAAGCTGCCCCCTCGGCAAGGTCACGACAGAGGTCATCACAACCCTCACCACCGTGGGT GCCGCGGTTCCAACCATGTCACGGGCCTCGGACCAGCCGCTTTCCTCCTCCAAGGCCGACCGAGTAGCTACAGTG ACCATGACCAGGACCTTGACGATCACGGGATGCGCGCTTACCGTCAAAAACTGCCCACTGGGCAAGGTCATGACC GAGGTCATCACGACCCTTACCACCATAGGTGATGGCGCCGTGGCGACTCCCACCATCTCACCGACCTCGGTCGAG CCGCTTCCGCCCCACAACTCCCAGAACGCCGACCGGGTAGCCACAATCACAATCACGAGGACCCTGACCATCGAG AGCTGTCCGCCTGGTGTTGAAAAGTGCCCCCTGGGCAAGGTCACCACCGAGGTCGTCACCACTCAGACTACCATA CGTGACGGCCCCGTGGCGGTCCCAACTACCTCACAGGCCTCGATCGAGCCGCTTCCCTCCCACAACCCCGATCGA GCCGCTGCAGTGACCATCACCCGGGTCTACACCGTCGAAAACTGCGCGCCCAGCGTCGAAGACTGTCCCCGGGGC AAAGTAACAACCTCGGTCGTCACCGTCATGCCGACTCGGGCGCACGAGCTCCCGGAGCCCACAACCGCTCCCGGC TCCGGCCGGGAGACGATGACGACGACGGTGACCAGGACGCACACCGTCACCAGCTGCGCTCCCACGGTGACGGAC TGCCCCCTCGGCAAGGTAACCACCGAGGTCGTCACCATGACCTACTGCCCCGGCGACGGGACTCGGGCCCCGGAC CCCCCCACGGCCGACCCCGGATCCGTCTCCGGACACGTGCCGCCCGCGCCCGTCGCCGACCGGCTGCCCTTCCGC CCGGGCCACGCGGCCTTTGTCAACGGAAGCCAAAGCGCGCCCCCCGCCGGCAACCCCGACCCCAACCACCACCAC CAGGACGCGAGCGGCACCGCCCGCCGCCCGTCCACCATGACGGCCAAGCTCTCCGCCGCCCCCAGCGTCGGCACC ACCGGCCTCCCGACCGCGGACAAGCCCCAGCCCAGCGCCGCCTGCCTCGGCTCCGGCTGTGCGCGCCCGCCTCCC GTCGCGAGCGGAGCGGCCCGCACGCCGAGCATGGCCGTCTGGCTTTTCCTCCTAAGCCCCGCGGCCGTTTTCCTA CTGTTATGA |
| Transcript | >Hirsu2|3403 ATGCCTCCGGTGTTCGACCAGCCAGCCGCAGGAGCTCCCGGCTCCGGCAGGAAGACCATCACCTCAACCCTCACC CGGACATACACCATCGCCAGCTGCGCACCCACGGTGACAAACTGCCCCTTGGGCAAGACTACCACTGAGATCATC ACCACCTCCACTGTCATCCGTGACGACACCGGGGCCGTGCCGCGCGTCACTCAGGCTCCCGTTGCACGTCTGGGA GAGGTGGTCACGGCCACCATCACCCGGACGTTCACGATCACGGCGTGCGCGTCCACCGTCACAAACTGCCCCCTG GGCAAGGTTACCACTGAGGTTATCACGACCCGTACCACCGTTGGTAGCGGCCCTGCGGCGGTGCCAGCCGTCTCA CAGGTCTCGGTCGAGCCGCTTTCCACCGACCGAGTGGCTACCGTGACCATGACCAGGACCTTCACGATCACGGGG TGCGCGCCTACCATCTCAAGCTGCCCCCTCGGCAAGGTCACGACAGAGGTCATCACAACCCTCACCACCGTGGGT GCCGCGGTTCCAACCATGTCACGGGCCTCGGACCAGCCGCTTTCCTCCTCCAAGGCCGACCGAGTAGCTACAGTG ACCATGACCAGGACCTTGACGATCACGGGATGCGCGCTTACCGTCAAAAACTGCCCACTGGGCAAGGTCATGACC GAGGTCATCACGACCCTTACCACCATAGGTGATGGCGCCGTGGCGACTCCCACCATCTCACCGACCTCGGTCGAG CCGCTTCCGCCCCACAACTCCCAGAACGCCGACCGGGTAGCCACAATCACAATCACGAGGACCCTGACCATCGAG AGCTGTCCGCCTGGTGTTGAAAAGTGCCCCCTGGGCAAGGTCACCACCGAGGTCGTCACCACTCAGACTACCATA CGTGACGGCCCCGTGGCGGTCCCAACTACCTCACAGGCCTCGATCGAGCCGCTTCCCTCCCACAACCCCGATCGA GCCGCTGCAGTGACCATCACCCGGGTCTACACCGTCGAAAACTGCGCGCCCAGCGTCGAAGACTGTCCCCGGGGC AAAGTAACAACCTCGGTCGTCACCGTCATGCCGACTCGGGCGCACGAGCTCCCGGAGCCCACAACCGCTCCCGGC TCCGGCCGGGAGACGATGACGACGACGGTGACCAGGACGCACACCGTCACCAGCTGCGCTCCCACGGTGACGGAC TGCCCCCTCGGCAAGGTAACCACCGAGGTCGTCACCATGACCTACTGCCCCGGCGACGGGACTCGGGCCCCGGAC CCCCCCACGGCCGACCCCGGATCCGTCTCCGGACACGTGCCGCCCGCGCCCGTCGCCGACCGGCTGCCCTTCCGC CCGGGCCACGCGGCCTTTGTCAACGGAAGCCAAAGCGCGCCCCCCGCCGGCAACCCCGACCCCAACCACCACCAC CAGGACGCGAGCGGCACCGCCCGCCGCCCGTCCACCATGACGGCCAAGCTCTCCGCCGCCCCCAGCGTCGGCACC ACCGGCCTCCCGACCGCGGACAAGCCCCAGCCCAGCGCCGCCTGCCTCGGCTCCGGCTGTGCGCGCCCGCCTCCC GTCGCGAGCGGAGCGGCCCGCACGCCGAGCATGGCCGTCTGGCTTTTCCTCCTAAGCCCCGCGGCCGTTTTCCTA CTGTTATGA |
| Gene | >Hirsu2|3403 ATGCCTCCGGTGTTCGACCAGCCAGCCGCAGGAGCTCCCGGCTCCGGCAGGAAGACCATCACCTCAACCCTCACC CGGACATACACCATCGCCAGCTGCGCACCCACGGTGACAAACTGCCCCTTGGGCAAGACTACCACTGAGATCATC ACCACCTCCACTGTCATCCGTGACGACACCGGGGCCGTGCCGCGCGTCACTCAGGCTCCCGTTGCACGTCTGGGA GAGGTGGTCACGGCCACCATCACCCGGACGTTCACGATCACGGCGTGCGCGTCCACCGTCACAAACTGCCCCCTG GGCAAGGTTACCACTGAGGTTATCACGACCCGTACCACCGTTGGTAGCGGCCCTGCGGCGGTGCCAGCCGTCTCA CAGGTCTCGGTCGAGCCGCTTTCCACCGACCGAGTGGCTACCGTGACCATGACCAGGACCTTCACGATCACGGGG TGCGCGCCTACCATCTCAAGCTGCCCCCTCGGCAAGGTCACGACAGAGGTCATCACAACCCTCACCACCGTGGGT GCCGCGGTTCCAACCATGTCACGGGCCTCGGACCAGCCGCTTTCCTCCTCCAAGGCCGACCGAGTAGCTACAGTG ACCATGACCAGGACCTTGACGATCACGGGATGCGCGCTTACCGTCAAAAACTGCCCACTGGGCAAGGTCATGACC GAGGTCATCACGACCCTTACCACCATAGGTGATGGCGCCGTGGCGACTCCCACCATCTCACCGACCTCGGTCGAG CCGCTTCCGCCCCACAACTCCCAGAACGCCGACCGGGTAGCCACAATCACAATCACGAGGACCCTGACCATCGAG AGCTGTCCGCCTGGTGTTGAAAAGTGCCCCCTGGGCAAGGTCACCACCGAGGTCGTCACCACTCAGACTACCATA CGTGACGGCCCCGTGGCGGTCCCAACTACCTCACAGGCCTCGATCGAGCCGCTTCCCTCCCACAACCCCGATCGA GCCGCTGCAGTGACCATCACCCGGGTCTACACCGTCGAAAACTGCGCGCCCAGCGTCGAAGACTGTCCCCGGGGC AAAGTAACAACCTCGGTCGTCACCGTCATGCCGACTCGGGCGCACGAGCTCCCGGAGCCCACAACCGCTCCCGGC TCCGGCCGGGAGACGATGACGACGACGGTGACCAGGACGCACACCGTCACCAGCTGCGCTCCCACGGTGACGGAC TGCCCCCTCGGCAAGGTAACCACCGAGGTCGTCACCATGACCTACTGCCCCGGCGACGGGACTCGGGCCCCGGAC CCCCCCACGGCCGACCCCGGATCCGTCTCCGGACACGTGCCGCCCGCGCCCGTCGCCGACCGGCTGCCCTTCCGC CCGGGCCACGCGGCCTTTGTCAACGGAAGCCAAAGCGCGCCCCCCGCCGGCAACCCCGACCCCAACCACCACCAC CAGGACGCGAGCGGCACCGCCCGCCGCCCGTCCACCATGACGGCCAAGCTCTCCGCCGCCCCCAGCGTCGGCACC ACCGGCCTCCCGACCGCGGACAAGCCCCAGCCCAGCGCCGCCTGCCTCGGCTCCGGCTGTGCGCGCCCGCCTCCC GTCGCGAGCGGAGCGGCCCGCACGCCGAGCATGGCCGTCTGGCTTTTCCTCCTAAGCCCCGCGGCCGTTTTCCTA CTGTTATGA |