© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3401 |
| Gene name | |
| Location | Contig_189:2916..3698 |
| Strand | - |
| Gene length (bp) | 782 |
| Transcript length (bp) | 732 |
| Coding sequence length (bp) | 732 |
| Protein length (aa) | 244 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.2038 | 0.2691 | 0.0609 | 0.0269 | 0.9208 | 0.0619 | 0.0268 | 0.0173 | 0.038 | 0.0211 |
| Orthofinder run ID | 4 |
| Orthogroup | 2406 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3401 MASILKRPRPMAERTLRVLVSPTPLTFAERRSVLQVLELHGPIEFFKMAPGFHSNFVSVPETLSAAKKLVAASPL TYSVPVVRDDASMTTADLEEPISFDTHRPRLTQNGTASDPGSSQEEATKDFRLDIFPQTDYNHKDSVSKSRLCQP WTPVWETDRSLMATVLKQSLPQTMAAKGLAYWFFDVELHPRTDLKARRLQLQRALPSKMMKNNGQAEPQLNRPAT EPSASCEGEPITPAAKPV* |
| Coding | >Hirsu2|3401 ATGGCGAGCATACTCAAACGACCGAGGCCCATGGCCGAGCGGACACTCCGAGTCCTCGTCTCGCCGACGCCTCTT ACATTTGCCGAGCGGCGGTCCGTCCTGCAGGTGCTGGAGCTGCACGGACCCATTGAGTTCTTCAAGATGGCGCCG GGCTTCCATAGCAACTTCGTATCCGTCCCCGAGACGTTGAGTGCGGCGAAGAAGCTCGTGGCCGCCAGTCCACTG ACCTATAGCGTCCCGGTTGTCCGAGACGATGCCAGCATGACAACGGCGGACCTGGAGGAGCCCATCAGCTTCGAT ACACACCGGCCCCGCCTGACACAGAACGGCACGGCGTCGGACCCCGGCAGCAGCCAGGAAGAAGCGACCAAGGAC TTTCGGCTGGACATCTTCCCCCAGACGGACTACAATCACAAGGACAGCGTGTCAAAGTCTCGGCTCTGCCAGCCG TGGACGCCGGTCTGGGAGACAGACCGGTCACTGATGGCCACGGTCCTGAAGCAGTCCCTGCCTCAGACCATGGCG GCTAAGGGTCTGGCGTACTGGTTTTTCGACGTCGAGCTTCATCCCAGGACAGACTTGAAAGCAAGGCGCTTGCAA CTGCAAAGGGCGCTCCCAAGTAAGATGATGAAGAACAATGGCCAGGCGGAGCCGCAATTAAATCGGCCGGCCACA GAGCCGAGTGCGTCATGCGAAGGCGAGCCAATCACGCCAGCTGCAAAACCCGTGTGA |
| Transcript | >Hirsu2|3401 ATGGCGAGCATACTCAAACGACCGAGGCCCATGGCCGAGCGGACACTCCGAGTCCTCGTCTCGCCGACGCCTCTT ACATTTGCCGAGCGGCGGTCCGTCCTGCAGGTGCTGGAGCTGCACGGACCCATTGAGTTCTTCAAGATGGCGCCG GGCTTCCATAGCAACTTCGTATCCGTCCCCGAGACGTTGAGTGCGGCGAAGAAGCTCGTGGCCGCCAGTCCACTG ACCTATAGCGTCCCGGTTGTCCGAGACGATGCCAGCATGACAACGGCGGACCTGGAGGAGCCCATCAGCTTCGAT ACACACCGGCCCCGCCTGACACAGAACGGCACGGCGTCGGACCCCGGCAGCAGCCAGGAAGAAGCGACCAAGGAC TTTCGGCTGGACATCTTCCCCCAGACGGACTACAATCACAAGGACAGCGTGTCAAAGTCTCGGCTCTGCCAGCCG TGGACGCCGGTCTGGGAGACAGACCGGTCACTGATGGCCACGGTCCTGAAGCAGTCCCTGCCTCAGACCATGGCG GCTAAGGGTCTGGCGTACTGGTTTTTCGACGTCGAGCTTCATCCCAGGACAGACTTGAAAGCAAGGCGCTTGCAA CTGCAAAGGGCGCTCCCAAGTAAGATGATGAAGAACAATGGCCAGGCGGAGCCGCAATTAAATCGGCCGGCCACA GAGCCGAGTGCGTCATGCGAAGGCGAGCCAATCACGCCAGCTGCAAAACCCGTGTGA |
| Gene | >Hirsu2|3401 ATGGCGAGCATACTCAAACGACCGAGGCCCATGGCCGAGCGGACACTCCGAGTCCTCGTCTCGCCGACGCCTCTT ACATTTGCCGAGCGGCGGTCCGTCCTGCAGGTGCTGGAGCTGCACGGACCCATTGAGTTCTTCAAGATGGCGCCG GTACGAGCCATCAGCCAGCCCGGAATGCCTCGACTGCTAACGGCCCGCAGGGCTTCCATAGCAACTTCGTATCCG TCCCCGAGACGTTGAGTGCGGCGAAGAAGCTCGTGGCCGCCAGTCCACTGACCTATAGCGTCCCGGTTGTCCGAG ACGATGCCAGCATGACAACGGCGGACCTGGAGGAGCCCATCAGCTTCGATACACACCGGCCCCGCCTGACACAGA ACGGCACGGCGTCGGACCCCGGCAGCAGCCAGGAAGAAGCGACCAAGGACTTTCGGCTGGACATCTTCCCCCAGA CGGACTACAATCACAAGGACAGCGTGTCAAAGTCTCGGCTCTGCCAGCCGTGGACGCCGGTCTGGGAGACAGACC GGTCACTGATGGCCACGGTCCTGAAGCAGTCCCTGCCTCAGACCATGGCGGCTAAGGGTCTGGCGTACTGGTTTT TCGACGTCGAGCTTCATCCCAGGACAGACTTGAAAGCAAGGCGCTTGCAACTGCAAAGGGCGCTCCCAAGTAAGA TGATGAAGAACAATGGCCAGGCGGAGCCGCAATTAAATCGGCCGGCCACAGAGCCGAGTGCGTCATGCGAAGGCG AGCCAATCACGCCAGCTGCAAAACCCGTGTGA |