Fungal Genomics

at Utrecht University

General Properties

Protein IDHirsu2|3400
Gene name
LocationContig_189:1110..1885
Strand-
Gene length (bp)775
Transcript length (bp)693
Coding sequence length (bp)693
Protein length (aa) 231

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06687 SUR7 SUR7/PalI family 2.1E-13 11 188

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q7SFN5|PALI_NEUCR pH-response regulator protein palI/prr-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=prr-5 PE=3 SV=2 13 211 3.0E-14
sp|Q51MB1|PALI_MAGO7 pH-response regulator protein palI/RIM9 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=RIM9 PE=3 SV=1 47 211 6.0E-10

GO

GO Term Description Terminal node
GO:0005886 plasma membrane Yes
GO:0005575 cellular_component No
GO:0016020 membrane No
GO:0110165 cellular anatomical entity No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cell membrane|Lysosome/Vacuole Signal peptide|Transmembrane domain 0.1466 0.1007 0.2909 0.7201 0.1439 0.0149 0.2717 0.641 0.5467 0.0058

SignalP

(None)

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 109 131 22
3 136 158 22
4 173 195 22

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID4
Orthogroup5123
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|5263
Ophiocordyceps australis map64 (Brazil) OphauB2|7212
Ophiocordyceps camponoti-floridani Ophcf2|05495
Ophiocordyceps camponoti-rufipedis Ophun1|566
Ophiocordyceps kimflemingae Ophio5|4040
Ophiocordyceps subramaniannii Hirsu2|3400 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Hirsu2|3400
MGFGTFVHHIGTLLLLVATALLIVVDVTSPVVNRLAIMRVELGNAVEGTDVTFGSFGFCHRGVRDSDRCSHTQIG
YDPAGLMRSIDGTDFGDAAQSTSRGLTRVMILHPVATALCFIAFLLCIGTGIVGSIGAAFFSLLSFIVTVVAMIC
DFVAFSIIKNNVNDNNRSRAYWSSGIWCMLAAALCTLLAAAVVLLTCCAGRSKKRREAEAKGSFSEGTTPAPRRP
FWKRG*
Coding >Hirsu2|3400
ATGGGCTTCGGCACCTTCGTCCACCACATCGGCACGCTGCTGCTCCTGGTCGCTACGGCGCTCCTCATCGTCGTC
GATGTCACCTCGCCGGTGGTGAACAGGCTGGCCATCATGCGGGTCGAGCTGGGCAATGCGGTCGAGGGAACGGAC
GTGACATTTGGATCATTTGGCTTTTGCCATCGCGGAGTCAGGGACTCGGACCGGTGCTCCCACACGCAAATCGGA
TACGACCCGGCCGGCCTGATGCGAAGCATCGACGGCACAGACTTTGGCGACGCGGCGCAGAGCACGTCGAGAGGG
CTCACGCGCGTCATGATCCTACACCCGGTGGCGACGGCGCTGTGCTTCATCGCCTTTCTGCTGTGCATCGGCACC
GGCATCGTCGGCTCGATCGGGGCGGCCTTCTTCTCGCTCCTGTCCTTCATCGTGACGGTGGTGGCCATGATCTGC
GACTTTGTCGCGTTCAGCATCATCAAGAACAACGTCAACGACAACAACCGCAGCAGGGCGTACTGGTCGTCGGGC
ATCTGGTGCATGCTGGCAGCGGCCCTCTGCACGCTGCTCGCCGCCGCCGTCGTCCTGCTGACCTGCTGCGCCGGC
CGATCCAAGAAGCGGCGCGAGGCCGAGGCCAAGGGGTCGTTCAGCGAGGGCACCACCCCCGCCCCCCGACGCCCC
TTCTGGAAACGAGGCTAG
Transcript >Hirsu2|3400
ATGGGCTTCGGCACCTTCGTCCACCACATCGGCACGCTGCTGCTCCTGGTCGCTACGGCGCTCCTCATCGTCGTC
GATGTCACCTCGCCGGTGGTGAACAGGCTGGCCATCATGCGGGTCGAGCTGGGCAATGCGGTCGAGGGAACGGAC
GTGACATTTGGATCATTTGGCTTTTGCCATCGCGGAGTCAGGGACTCGGACCGGTGCTCCCACACGCAAATCGGA
TACGACCCGGCCGGCCTGATGCGAAGCATCGACGGCACAGACTTTGGCGACGCGGCGCAGAGCACGTCGAGAGGG
CTCACGCGCGTCATGATCCTACACCCGGTGGCGACGGCGCTGTGCTTCATCGCCTTTCTGCTGTGCATCGGCACC
GGCATCGTCGGCTCGATCGGGGCGGCCTTCTTCTCGCTCCTGTCCTTCATCGTGACGGTGGTGGCCATGATCTGC
GACTTTGTCGCGTTCAGCATCATCAAGAACAACGTCAACGACAACAACCGCAGCAGGGCGTACTGGTCGTCGGGC
ATCTGGTGCATGCTGGCAGCGGCCCTCTGCACGCTGCTCGCCGCCGCCGTCGTCCTGCTGACCTGCTGCGCCGGC
CGATCCAAGAAGCGGCGCGAGGCCGAGGCCAAGGGGTCGTTCAGCGAGGGCACCACCCCCGCCCCCCGACGCCCC
TTCTGGAAACGAGGCTAG
Gene >Hirsu2|3400
ATGGGCTTCGGCACCTTCGTCCACCACATCGGCACGCTGCTGCTCCTGGTCGCTACGGCGCTCCTCATCGTCGTC
GATGTCACCTCGCCGGTGGTGAACAGGCTGGCCATCATGCGGGTCGAGCTGGGCAATGCGGTCGAGGGAACGGAC
GTGACATTTGGATCATTTGGCTTTTGCCATCGCGGAGTCAGGTAAGCAGCATCATGTGCGCCCTGTTGTCACCGT
TTTGCAGCGTGGGATCCAGTCGAAATGTTGACGCGGGTCCTACCGCAGGGACTCGGACCGGTGCTCCCACACGCA
AATCGGATACGACCCGGCCGGCCTGATGCGAAGCATCGACGGCACAGACTTTGGCGACGCGGCGCAGAGCACGTC
GAGAGGGCTCACGCGCGTCATGATCCTACACCCGGTGGCGACGGCGCTGTGCTTCATCGCCTTTCTGCTGTGCAT
CGGCACCGGCATCGTCGGCTCGATCGGGGCGGCCTTCTTCTCGCTCCTGTCCTTCATCGTGACGGTGGTGGCCAT
GATCTGCGACTTTGTCGCGTTCAGCATCATCAAGAACAACGTCAACGACAACAACCGCAGCAGGGCGTACTGGTC
GTCGGGCATCTGGTGCATGCTGGCAGCGGCCCTCTGCACGCTGCTCGCCGCCGCCGTCGTCCTGCTGACCTGCTG
CGCCGGCCGATCCAAGAAGCGGCGCGAGGCCGAGGCCAAGGGGTCGTTCAGCGAGGGCACCACCCCCGCCCCCCG
ACGCCCCTTCTGGAAACGAGGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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