Fungal Genomics

at Utrecht University

General Properties

Protein ID	Hirsu2\|3393
Gene name
Location	Contig_1884:213..1803
Strand	+
Gene length (bp)	1590
Transcript length (bp)	1266
Coding sequence length (bp)	1266
Protein length (aa)	422

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF11951	Fungal_trans_2	Fungal specific transcription factor domain	1.5E-20	7	403

Swissprot hits

(None)

GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]

Localizations	Signals	Cytoplasm	Nucleus	Extracellular	Cell membrane	Mitochondrion	Plastid	Endoplasmic reticulum	Lysosome vacuole	Golgi apparatus	Peroxisome
Cytoplasm\|Nucleus		0.6636	0.6979	0.2817	0.0589	0.2701	0.0188	0.0648	0.0782	0.0751	0.0054

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class (based on PFAM domains)
Fungal Specific TF

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	4
Orthogroup	9336
Change Orthofinder run

Species	Protein ID
Ophiocordyceps subramaniannii	Hirsu2\|3393 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Hirsu2\|3393 MLEAAYYFNAEIYPFLAAHQLAPTPFVAPIVRVEHHPPSMRHAIVSLVLGHRVLHLAALDAAAAAAPTASSLAGS LRWRVHCHVGHAIRALNGEIERESTRCATTTIVCVFILLIGELFQSASPQWRFHNDGLATLVALRGGVAKLVEDE GEIIKPGMLSLLVMSVMANATSPSHQQVAPIGHSCSLATIADLYACGIYPRLPCPQELFVEIVRTNQLRRRLAHH HHGGPAARDAARAVRRQHQRLPDFSPPDWAAAREASSPPATWLLLGRLFHSAAVLFAHATLAGFVDDGRPAAAAA GDEEADPGAEEGEAGPDPGAEEGEAGADPVASHRAQLFRLLEQGLASEVTRYGILWPLVVAGFEAAHGTPAQRVL VERGLIDMSRESGAAVVVARNALKAFWLSGKRCWDDCFHEPFALVF*
Coding	>Hirsu2\|3393 ATGCTCGAGGCAGCGTACTACTTCAACGCAGAGATATACCCCTTTCTAGCCGCCCACCAGCTCGCGCCAACGCCC TTCGTCGCGCCCATCGTCCGAGTCGAGCACCACCCGCCCTCGATGCGGCACGCCATCGTCTCGCTCGTCCTCGGC CACCGCGTGCTGCACCTGGCGGCCCTCGACGCCGCCGCCGCGGCGGCGCCCACGGCGTCCAGCCTGGCCGGCTCG CTGCGCTGGCGCGTCCACTGCCACGTCGGGCACGCCATCCGGGCTCTCAACGGCGAGATCGAACGCGAGTCGACG AGGTGCGCGACGACGACGATCGTCTGCGTCTTCATCCTGCTCATTGGCGAGCTCTTCCAGTCCGCCTCGCCGCAA TGGCGCTTCCACAACGACGGCCTGGCCACCCTCGTCGCCCTCCGCGGCGGCGTCGCGAAGCTTGTGGAGGACGAG GGCGAAATCATCAAGCCCGGCATGCTCTCCCTGCTCGTGATGAGCGTCATGGCGAATGCGACCAGCCCGTCGCAC CAGCAAGTCGCACCCATCGGCCACAGCTGCTCCCTGGCGACCATCGCGGACCTGTACGCCTGCGGCATCTACCCG CGCCTGCCCTGCCCGCAAGAACTCTTCGTTGAGATCGTCCGCACCAACCAGCTGCGGCGGCGGCTCGCCCACCAC CACCACGGCGGCCCGGCCGCCCGCGATGCCGCCCGGGCCGTTCGGCGCCAGCACCAGCGCCTCCCCGACTTCTCG CCACCCGACTGGGCCGCCGCGCGGGAGGCCAGCTCGCCGCCCGCGACCTGGCTGCTTCTCGGGCGCCTCTTCCAC TCCGCCGCCGTTCTGTTCGCCCACGCCACCCTGGCCGGCTTCGTGGACGACGGGCGGCCGGCGGCGGCGGCGGCA GGGGATGAGGAGGCCGATCCGGGGGCAGAGGAAGGGGAGGCGGGGCCCGATCCGGGGGCAGAGGAAGGGGAAGCG GGAGCCGACCCGGTGGCCAGCCATCGCGCCCAGCTCTTCCGCCTCCTCGAGCAGGGCCTCGCGTCCGAGGTGACC AGGTACGGCATCCTGTGGCCGCTCGTCGTAGCCGGGTTCGAGGCCGCCCACGGCACGCCCGCGCAGAGGGTGTTG GTAGAAAGGGGCCTGATTGACATGAGCCGCGAGTCGGGCGCCGCTGTCGTCGTCGCTCGGAACGCCCTGAAGGCG TTCTGGCTGTCTGGGAAGCGGTGCTGGGACGACTGCTTTCACGAACCTTTTGCCCTCGTCTTTTGA
Transcript	>Hirsu2\|3393 ATGCTCGAGGCAGCGTACTACTTCAACGCAGAGATATACCCCTTTCTAGCCGCCCACCAGCTCGCGCCAACGCCC TTCGTCGCGCCCATCGTCCGAGTCGAGCACCACCCGCCCTCGATGCGGCACGCCATCGTCTCGCTCGTCCTCGGC CACCGCGTGCTGCACCTGGCGGCCCTCGACGCCGCCGCCGCGGCGGCGCCCACGGCGTCCAGCCTGGCCGGCTCG CTGCGCTGGCGCGTCCACTGCCACGTCGGGCACGCCATCCGGGCTCTCAACGGCGAGATCGAACGCGAGTCGACG AGGTGCGCGACGACGACGATCGTCTGCGTCTTCATCCTGCTCATTGGCGAGCTCTTCCAGTCCGCCTCGCCGCAA TGGCGCTTCCACAACGACGGCCTGGCCACCCTCGTCGCCCTCCGCGGCGGCGTCGCGAAGCTTGTGGAGGACGAG GGCGAAATCATCAAGCCCGGCATGCTCTCCCTGCTCGTGATGAGCGTCATGGCGAATGCGACCAGCCCGTCGCAC CAGCAAGTCGCACCCATCGGCCACAGCTGCTCCCTGGCGACCATCGCGGACCTGTACGCCTGCGGCATCTACCCG CGCCTGCCCTGCCCGCAAGAACTCTTCGTTGAGATCGTCCGCACCAACCAGCTGCGGCGGCGGCTCGCCCACCAC CACCACGGCGGCCCGGCCGCCCGCGATGCCGCCCGGGCCGTTCGGCGCCAGCACCAGCGCCTCCCCGACTTCTCG CCACCCGACTGGGCCGCCGCGCGGGAGGCCAGCTCGCCGCCCGCGACCTGGCTGCTTCTCGGGCGCCTCTTCCAC TCCGCCGCCGTTCTGTTCGCCCACGCCACCCTGGCCGGCTTCGTGGACGACGGGCGGCCGGCGGCGGCGGCGGCA GGGGATGAGGAGGCCGATCCGGGGGCAGAGGAAGGGGAGGCGGGGCCCGATCCGGGGGCAGAGGAAGGGGAAGCG GGAGCCGACCCGGTGGCCAGCCATCGCGCCCAGCTCTTCCGCCTCCTCGAGCAGGGCCTCGCGTCCGAGGTGACC AGGTACGGCATCCTGTGGCCGCTCGTCGTAGCCGGGTTCGAGGCCGCCCACGGCACGCCCGCGCAGAGGGTGTTG GTAGAAAGGGGCCTGATTGACATGAGCCGCGAGTCGGGCGCCGCTGTCGTCGTCGCTCGGAACGCCCTGAAGGCG TTCTGGCTGTCTGGGAAGCGGTGCTGGGACGACTGCTTTCACGAACCTTTTGCCCTCGTCTTTTGA
Gene	>Hirsu2\|3393 ATGCTCGAGGCAGCGTACTACTGTGCGTCCACGGTCCTCCTGAGTGCCCCTTGCCCTGAGAAGCAGGCTGCCGCG AAGCCGGCACAAAGAGAGAGAGAACGAGAGAGAGGGAGGAGGCTGACGAGGCGGCCGTCCGCAGTCAACGCAGAG ATATACCCCTTTCTAGCCGCCCACCAGCTCGCGCCAACGCCCTTCGTCGCGCCCATCGTCCGAGTCGAGCACCAC CCGCCCTCGATGCGGCACGCCATCGTCTCGCTCGTCCTCGGCCACCGCGTGCTGCACCTGGCGGCCCTCGACGCC GCCGCCGCGGCGGCGCCCACGGCGTCCAGCCTGGCCGGCTCGCTGCGCTGGCGCGTCCACTGCCACGTCGGGCAC GCCATCCGGGCTCTCAACGGCGAGATCGAACGCGAGTCGACGAGGTGCGCGACGACGACGATCGTCTGCGTCTTC ATCCTGCTCATTGGCGAGGTGCGTTTCCCCCTTCTCCTGTTTCTCGCCCGCGCTCACGGGGCACTCGCCAGCTCT TCCAGTCCGCCTCGCCGCAATGGCGCTTCCACAACGACGGCCTGGCCACCCTCGTCGCCCTCCGCGGCGGCGTCG CGAAGCTTGTGGAGGACGAGGGCGAAATCATCAAGCCCGGCATGCTCTCCCTGCTCGTGTGAGTCCCCCCCCCAC TGTTCGCCTCATGCTCGGTTCTCGACGCTCCGCTTGGTTCCCCCCTGAAGGAAGGGTGAGAGGAGGCACATGAGG GGTTGGGGGATCATCTTCTCGTTCGAGGGTAGCTGACGTGGAAGAGCACGCCGCTCTGGCAGGATGAGCGTCATG GCGAATGCGACCAGCCCGTCGCACCAGCAAGTCGCACCCATCGGCCACAGCTGCTCCCTGGCGACCATCGCGGAC CTGTACGCCTGCGGCATCTACCCGCGCCTGCCCTGCCCGCAAGAACTCTTCGTTGAGATCGTCCGCACCAACCAG CTGCGGCGGCGGCTCGCCCACCACCACCACGGCGGCCCGGCCGCCCGCGATGCCGCCCGGGCCGTTCGGCGCCAG CACCAGCGCCTCCCCGACTTCTCGCCACCCGACTGGGCCGCCGCGCGGGAGGCCAGCTCGCCGCCCGCGACCTGG CTGCTTCTCGGGCGCCTCTTCCACTCCGCCGCCGTTCTGTTCGCCCACGCCACCCTGGCCGGCTTCGTGGACGAC GGGCGGCCGGCGGCGGCGGCGGCAGGGGATGAGGAGGCCGATCCGGGGGCAGAGGAAGGGGAGGCGGGGCCCGAT CCGGGGGCAGAGGAAGGGGAAGCGGGAGCCGACCCGGTGGCCAGCCATCGCGCCCAGCTCTTCCGCCTCCTCGAG CAGGGCCTCGCGTCCGAGGTGACCAGGTACGGCATCCTGTGGCCGCTCGTCGTAGCCGGGTTCGAGGCCGCCCAC GGCACGCCCGCGCAGAGGGTGTTGGTAGAAAGGGGCCTGATTGACATGAGCCGCGAGTCGGGCGCCGCTGTCGTC GTCGCTCGGAACGCCCTGAAGGCGTTCTGGCTGTCTGGGAAGCGGTGCTGGGACGACTGCTTTCACGAACCTTTT GCCCTCGTCTTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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