© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Hirsu2|3391 |
| Gene name | |
| Location | Contig_1883:644..3458 |
| Strand | + |
| Gene length (bp) | 2814 |
| Transcript length (bp) | 2814 |
| Coding sequence length (bp) | 2814 |
| Protein length (aa) | 938 |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Nucleus | Nuclear localization signal | 0.375 | 0.899 | 0.128 | 0.0186 | 0.1449 | 0.0092 | 0.0326 | 0.0245 | 0.0119 | 0.017 |
| Orthofinder run ID | 4 |
| Orthogroup | 2399 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Hirsu2|3391 MAATPFEPTHAAASLFDIYNDASATPRNPPSLPCGGCNFADLTPGANGLKCGCRRFWARQPAAGPGLCPQAGWCM CGHHACYHDQAAPDDQAAPARPAGQENERPRTGREPLSPVLGIALPGMDLSSAAGCGPLSFLHDVPGDVDRCSPL KASQQPSGSMPDTLAWGDVPHSASPARALNVLPPIPSQCLISSQATSATTSSAHAKYLRPFAGKGLRTLSSVGEP RPADVRVETSTAPVADCYVRAVSDEPAAAAAAASPRPATVARVEPRATDPDALMDLTNTVSDHAHRLDRLETVSF HGECHDRLENMDVRMYELESRVDEVEKLAGDNTSVVTARGAREGDPAVRGDAAASASVASRVASPEVMDRIHSLQ AQVAALQSYLPSPQHAWVVDVVFLPFPLKRLWQEMHQFKSDSAVDSDDWTQLPMTCSTATRRSQSPFLNDWAVAD HDADWLLPRACSSTSVVGRRLRSRGLIRTVSVKAPDYRSVQAAVYAAFGGVFHEMRVLPRAHPSDPRSARFLGLH QSWVPLRKVHKDSRLRFLSPAEMTTPGLWDVPFLSSIMMRSSEPTLFVTHPDAYLQDPQAFSTGWTWQRVREMTR VYPDVTESRQVPEADALEDYWAWSEQLDEPRRASTVATGPEPRQAPSSPLLARNHSVHSWRRSVSPAVACGQPAP QLRRRDSVTPLIRTTSGPAAVVAAAADLFRPSPPAARRRVVSHGQSRRSSPSLLAMSSSQARVGKRRRTRSPSHP HFTPRWTASPSPMLPGPHERHATRGTTPFAYATPHSNAPLQEIRLPRGGSMARTSPTRAPEADLETGESESEASY GRGLGWAMMEEDDDDDDDDGDDDDDGSGSDGEAPARRQPTARSWQLPEDEPWPGIEDREQASDGENMDPRARHEP GSASDGEGSSQPSEYPSTDRAWRDSDGAGFRIHEDGA* |
| Coding | >Hirsu2|3391 ATGGCTGCGACCCCCTTCGAACCGACCCATGCCGCCGCCAGCCTCTTCGATATCTACAATGACGCGTCGGCCACG CCGCGCAATCCACCCTCCCTGCCCTGCGGCGGCTGCAACTTTGCTGACCTGACGCCCGGCGCCAACGGCCTCAAG TGCGGGTGCCGTCGCTTCTGGGCGCGCCAGCCTGCCGCCGGCCCGGGACTCTGCCCCCAGGCCGGCTGGTGCATG TGCGGCCACCACGCCTGCTACCACGATCAGGCCGCCCCCGACGACCAGGCCGCCCCCGCCCGCCCGGCCGGACAG GAGAATGAGCGGCCCCGGACCGGCCGCGAGCCGCTGAGCCCCGTGCTCGGCATCGCCCTGCCCGGCATGGACCTC TCCAGCGCCGCCGGCTGCGGCCCGCTGTCCTTCCTCCACGACGTCCCCGGCGACGTCGACCGTTGCTCCCCGCTC AAGGCCAGCCAGCAGCCGTCCGGGTCCATGCCCGACACCCTGGCCTGGGGAGACGTGCCCCATTCTGCCTCGCCG GCTCGCGCCCTCAATGTCCTGCCTCCCATCCCCTCCCAGTGCCTCATCTCCTCCCAGGCCACCTCCGCCACCACC TCGTCCGCCCACGCCAAATACCTGAGACCCTTTGCTGGCAAGGGGCTGCGGACACTGAGTAGTGTCGGCGAGCCC AGGCCCGCCGACGTGCGCGTCGAGACTTCGACCGCTCCGGTCGCCGATTGTTACGTCCGCGCCGTGTCGGACGAG CCCGCCGCCGCCGCCGCCGCCGCTTCCCCACGGCCCGCCACCGTCGCCCGGGTGGAGCCTCGCGCCACCGATCCC GACGCTCTGATGGACTTGACCAACACCGTCAGCGACCACGCGCATCGCCTGGACCGGCTGGAGACCGTTTCCTTC CACGGGGAATGCCACGACCGATTGGAAAACATGGACGTCCGCATGTACGAGCTGGAGAGCCGCGTCGACGAGGTC GAGAAGCTTGCCGGCGACAACACCAGCGTCGTCACGGCCCGCGGCGCACGGGAGGGAGATCCCGCCGTCCGGGGC GACGCAGCGGCCTCGGCCAGCGTCGCCAGCCGAGTGGCCTCGCCCGAAGTCATGGACCGCATCCACTCCCTCCAG GCCCAGGTTGCCGCGCTCCAGTCATATCTCCCGTCCCCCCAGCACGCCTGGGTGGTCGACGTCGTCTTTCTCCCC TTCCCCCTCAAGAGGCTTTGGCAGGAGATGCACCAGTTCAAGTCGGATTCGGCCGTCGACAGCGACGACTGGACC CAGCTCCCCATGACCTGCAGCACCGCGACGAGACGCTCGCAGTCGCCCTTCCTCAACGACTGGGCCGTCGCCGAC CACGACGCCGACTGGCTGCTCCCCAGGGCGTGCAGCAGCACGAGCGTCGTGGGCAGACGACTGCGGAGCCGGGGC CTGATCCGGACAGTGTCCGTCAAGGCGCCCGACTACCGCAGCGTCCAGGCGGCCGTGTACGCGGCCTTCGGCGGC GTCTTCCACGAGATGCGGGTTCTGCCGCGCGCGCACCCCTCGGACCCCCGATCGGCCCGCTTCCTCGGCCTGCAC CAGAGCTGGGTCCCGCTGCGCAAGGTCCACAAGGACTCCCGGCTCCGGTTCCTGAGCCCGGCCGAGATGACGACG CCGGGGCTGTGGGACGTGCCCTTCCTCAGCTCCATCATGATGCGCTCGTCCGAGCCGACGCTCTTCGTCACCCAC CCCGACGCCTACCTGCAGGACCCCCAGGCCTTCTCGACCGGATGGACGTGGCAGCGGGTGCGCGAGATGACCAGG GTCTATCCGGACGTGACGGAGTCGCGCCAGGTGCCCGAGGCGGACGCCCTCGAGGACTACTGGGCCTGGAGCGAG CAGCTGGACGAGCCGCGCCGCGCGTCGACGGTGGCCACGGGTCCCGAGCCGCGGCAGGCGCCCTCGTCGCCGCTG CTGGCCCGCAACCACAGCGTCCACTCGTGGAGGAGGTCCGTGAGCCCCGCCGTGGCGTGCGGTCAGCCCGCGCCG CAGCTCCGGCGCAGAGACTCGGTCACGCCCCTGATCCGCACCACGTCAGGCCCCGCCGCCGTCGTCGCCGCTGCC GCCGATTTGTTCCGGCCTTCGCCCCCGGCCGCCCGCCGTCGGGTCGTGTCGCACGGCCAGAGCCGACGGTCGTCG CCGAGCCTGCTGGCCATGTCGTCGTCGCAGGCGCGCGTCGGCAAGAGACGGCGGACGCGGTCGCCCAGCCACCCG CACTTCACGCCCAGGTGGACGGCGTCGCCCAGCCCGATGCTGCCGGGCCCGCACGAGCGCCACGCGACGCGGGGC ACGACGCCGTTCGCGTACGCGACGCCGCACAGCAACGCGCCGCTGCAGGAGATCCGCCTCCCGCGCGGCGGCAGC ATGGCGCGCACCAGCCCGACGCGCGCGCCCGAGGCCGACTTGGAGACGGGCGAGAGCGAGTCGGAGGCGTCGTAC GGCCGAGGGCTCGGGTGGGCGATGATGGAGGAAGACGACGACGACGACGACGACGACGGCGACGACGACGACGAC GGGAGCGGCAGCGACGGCGAGGCCCCGGCGCGGCGGCAGCCGACAGCGCGGTCGTGGCAGCTGCCGGAGGACGAG CCGTGGCCGGGCATCGAAGACCGCGAGCAGGCGTCGGACGGGGAGAACATGGACCCGCGGGCGCGGCACGAGCCC GGCTCGGCGTCGGATGGCGAGGGCAGCAGCCAGCCGTCCGAGTACCCGAGCACGGACCGGGCGTGGCGCGACAGC GACGGGGCCGGCTTCCGCATCCACGAGGACGGCGCGTGA |
| Transcript | >Hirsu2|3391 ATGGCTGCGACCCCCTTCGAACCGACCCATGCCGCCGCCAGCCTCTTCGATATCTACAATGACGCGTCGGCCACG CCGCGCAATCCACCCTCCCTGCCCTGCGGCGGCTGCAACTTTGCTGACCTGACGCCCGGCGCCAACGGCCTCAAG TGCGGGTGCCGTCGCTTCTGGGCGCGCCAGCCTGCCGCCGGCCCGGGACTCTGCCCCCAGGCCGGCTGGTGCATG TGCGGCCACCACGCCTGCTACCACGATCAGGCCGCCCCCGACGACCAGGCCGCCCCCGCCCGCCCGGCCGGACAG GAGAATGAGCGGCCCCGGACCGGCCGCGAGCCGCTGAGCCCCGTGCTCGGCATCGCCCTGCCCGGCATGGACCTC TCCAGCGCCGCCGGCTGCGGCCCGCTGTCCTTCCTCCACGACGTCCCCGGCGACGTCGACCGTTGCTCCCCGCTC AAGGCCAGCCAGCAGCCGTCCGGGTCCATGCCCGACACCCTGGCCTGGGGAGACGTGCCCCATTCTGCCTCGCCG GCTCGCGCCCTCAATGTCCTGCCTCCCATCCCCTCCCAGTGCCTCATCTCCTCCCAGGCCACCTCCGCCACCACC TCGTCCGCCCACGCCAAATACCTGAGACCCTTTGCTGGCAAGGGGCTGCGGACACTGAGTAGTGTCGGCGAGCCC AGGCCCGCCGACGTGCGCGTCGAGACTTCGACCGCTCCGGTCGCCGATTGTTACGTCCGCGCCGTGTCGGACGAG CCCGCCGCCGCCGCCGCCGCCGCTTCCCCACGGCCCGCCACCGTCGCCCGGGTGGAGCCTCGCGCCACCGATCCC GACGCTCTGATGGACTTGACCAACACCGTCAGCGACCACGCGCATCGCCTGGACCGGCTGGAGACCGTTTCCTTC CACGGGGAATGCCACGACCGATTGGAAAACATGGACGTCCGCATGTACGAGCTGGAGAGCCGCGTCGACGAGGTC GAGAAGCTTGCCGGCGACAACACCAGCGTCGTCACGGCCCGCGGCGCACGGGAGGGAGATCCCGCCGTCCGGGGC GACGCAGCGGCCTCGGCCAGCGTCGCCAGCCGAGTGGCCTCGCCCGAAGTCATGGACCGCATCCACTCCCTCCAG GCCCAGGTTGCCGCGCTCCAGTCATATCTCCCGTCCCCCCAGCACGCCTGGGTGGTCGACGTCGTCTTTCTCCCC TTCCCCCTCAAGAGGCTTTGGCAGGAGATGCACCAGTTCAAGTCGGATTCGGCCGTCGACAGCGACGACTGGACC CAGCTCCCCATGACCTGCAGCACCGCGACGAGACGCTCGCAGTCGCCCTTCCTCAACGACTGGGCCGTCGCCGAC CACGACGCCGACTGGCTGCTCCCCAGGGCGTGCAGCAGCACGAGCGTCGTGGGCAGACGACTGCGGAGCCGGGGC CTGATCCGGACAGTGTCCGTCAAGGCGCCCGACTACCGCAGCGTCCAGGCGGCCGTGTACGCGGCCTTCGGCGGC GTCTTCCACGAGATGCGGGTTCTGCCGCGCGCGCACCCCTCGGACCCCCGATCGGCCCGCTTCCTCGGCCTGCAC CAGAGCTGGGTCCCGCTGCGCAAGGTCCACAAGGACTCCCGGCTCCGGTTCCTGAGCCCGGCCGAGATGACGACG CCGGGGCTGTGGGACGTGCCCTTCCTCAGCTCCATCATGATGCGCTCGTCCGAGCCGACGCTCTTCGTCACCCAC CCCGACGCCTACCTGCAGGACCCCCAGGCCTTCTCGACCGGATGGACGTGGCAGCGGGTGCGCGAGATGACCAGG GTCTATCCGGACGTGACGGAGTCGCGCCAGGTGCCCGAGGCGGACGCCCTCGAGGACTACTGGGCCTGGAGCGAG CAGCTGGACGAGCCGCGCCGCGCGTCGACGGTGGCCACGGGTCCCGAGCCGCGGCAGGCGCCCTCGTCGCCGCTG CTGGCCCGCAACCACAGCGTCCACTCGTGGAGGAGGTCCGTGAGCCCCGCCGTGGCGTGCGGTCAGCCCGCGCCG CAGCTCCGGCGCAGAGACTCGGTCACGCCCCTGATCCGCACCACGTCAGGCCCCGCCGCCGTCGTCGCCGCTGCC GCCGATTTGTTCCGGCCTTCGCCCCCGGCCGCCCGCCGTCGGGTCGTGTCGCACGGCCAGAGCCGACGGTCGTCG CCGAGCCTGCTGGCCATGTCGTCGTCGCAGGCGCGCGTCGGCAAGAGACGGCGGACGCGGTCGCCCAGCCACCCG CACTTCACGCCCAGGTGGACGGCGTCGCCCAGCCCGATGCTGCCGGGCCCGCACGAGCGCCACGCGACGCGGGGC ACGACGCCGTTCGCGTACGCGACGCCGCACAGCAACGCGCCGCTGCAGGAGATCCGCCTCCCGCGCGGCGGCAGC ATGGCGCGCACCAGCCCGACGCGCGCGCCCGAGGCCGACTTGGAGACGGGCGAGAGCGAGTCGGAGGCGTCGTAC GGCCGAGGGCTCGGGTGGGCGATGATGGAGGAAGACGACGACGACGACGACGACGACGGCGACGACGACGACGAC GGGAGCGGCAGCGACGGCGAGGCCCCGGCGCGGCGGCAGCCGACAGCGCGGTCGTGGCAGCTGCCGGAGGACGAG CCGTGGCCGGGCATCGAAGACCGCGAGCAGGCGTCGGACGGGGAGAACATGGACCCGCGGGCGCGGCACGAGCCC GGCTCGGCGTCGGATGGCGAGGGCAGCAGCCAGCCGTCCGAGTACCCGAGCACGGACCGGGCGTGGCGCGACAGC GACGGGGCCGGCTTCCGCATCCACGAGGACGGCGCGTGA |
| Gene | >Hirsu2|3391 ATGGCTGCGACCCCCTTCGAACCGACCCATGCCGCCGCCAGCCTCTTCGATATCTACAATGACGCGTCGGCCACG CCGCGCAATCCACCCTCCCTGCCCTGCGGCGGCTGCAACTTTGCTGACCTGACGCCCGGCGCCAACGGCCTCAAG TGCGGGTGCCGTCGCTTCTGGGCGCGCCAGCCTGCCGCCGGCCCGGGACTCTGCCCCCAGGCCGGCTGGTGCATG TGCGGCCACCACGCCTGCTACCACGATCAGGCCGCCCCCGACGACCAGGCCGCCCCCGCCCGCCCGGCCGGACAG GAGAATGAGCGGCCCCGGACCGGCCGCGAGCCGCTGAGCCCCGTGCTCGGCATCGCCCTGCCCGGCATGGACCTC TCCAGCGCCGCCGGCTGCGGCCCGCTGTCCTTCCTCCACGACGTCCCCGGCGACGTCGACCGTTGCTCCCCGCTC AAGGCCAGCCAGCAGCCGTCCGGGTCCATGCCCGACACCCTGGCCTGGGGAGACGTGCCCCATTCTGCCTCGCCG GCTCGCGCCCTCAATGTCCTGCCTCCCATCCCCTCCCAGTGCCTCATCTCCTCCCAGGCCACCTCCGCCACCACC TCGTCCGCCCACGCCAAATACCTGAGACCCTTTGCTGGCAAGGGGCTGCGGACACTGAGTAGTGTCGGCGAGCCC AGGCCCGCCGACGTGCGCGTCGAGACTTCGACCGCTCCGGTCGCCGATTGTTACGTCCGCGCCGTGTCGGACGAG CCCGCCGCCGCCGCCGCCGCCGCTTCCCCACGGCCCGCCACCGTCGCCCGGGTGGAGCCTCGCGCCACCGATCCC GACGCTCTGATGGACTTGACCAACACCGTCAGCGACCACGCGCATCGCCTGGACCGGCTGGAGACCGTTTCCTTC CACGGGGAATGCCACGACCGATTGGAAAACATGGACGTCCGCATGTACGAGCTGGAGAGCCGCGTCGACGAGGTC GAGAAGCTTGCCGGCGACAACACCAGCGTCGTCACGGCCCGCGGCGCACGGGAGGGAGATCCCGCCGTCCGGGGC GACGCAGCGGCCTCGGCCAGCGTCGCCAGCCGAGTGGCCTCGCCCGAAGTCATGGACCGCATCCACTCCCTCCAG GCCCAGGTTGCCGCGCTCCAGTCATATCTCCCGTCCCCCCAGCACGCCTGGGTGGTCGACGTCGTCTTTCTCCCC TTCCCCCTCAAGAGGCTTTGGCAGGAGATGCACCAGTTCAAGTCGGATTCGGCCGTCGACAGCGACGACTGGACC CAGCTCCCCATGACCTGCAGCACCGCGACGAGACGCTCGCAGTCGCCCTTCCTCAACGACTGGGCCGTCGCCGAC CACGACGCCGACTGGCTGCTCCCCAGGGCGTGCAGCAGCACGAGCGTCGTGGGCAGACGACTGCGGAGCCGGGGC CTGATCCGGACAGTGTCCGTCAAGGCGCCCGACTACCGCAGCGTCCAGGCGGCCGTGTACGCGGCCTTCGGCGGC GTCTTCCACGAGATGCGGGTTCTGCCGCGCGCGCACCCCTCGGACCCCCGATCGGCCCGCTTCCTCGGCCTGCAC CAGAGCTGGGTCCCGCTGCGCAAGGTCCACAAGGACTCCCGGCTCCGGTTCCTGAGCCCGGCCGAGATGACGACG CCGGGGCTGTGGGACGTGCCCTTCCTCAGCTCCATCATGATGCGCTCGTCCGAGCCGACGCTCTTCGTCACCCAC CCCGACGCCTACCTGCAGGACCCCCAGGCCTTCTCGACCGGATGGACGTGGCAGCGGGTGCGCGAGATGACCAGG GTCTATCCGGACGTGACGGAGTCGCGCCAGGTGCCCGAGGCGGACGCCCTCGAGGACTACTGGGCCTGGAGCGAG CAGCTGGACGAGCCGCGCCGCGCGTCGACGGTGGCCACGGGTCCCGAGCCGCGGCAGGCGCCCTCGTCGCCGCTG CTGGCCCGCAACCACAGCGTCCACTCGTGGAGGAGGTCCGTGAGCCCCGCCGTGGCGTGCGGTCAGCCCGCGCCG CAGCTCCGGCGCAGAGACTCGGTCACGCCCCTGATCCGCACCACGTCAGGCCCCGCCGCCGTCGTCGCCGCTGCC GCCGATTTGTTCCGGCCTTCGCCCCCGGCCGCCCGCCGTCGGGTCGTGTCGCACGGCCAGAGCCGACGGTCGTCG CCGAGCCTGCTGGCCATGTCGTCGTCGCAGGCGCGCGTCGGCAAGAGACGGCGGACGCGGTCGCCCAGCCACCCG CACTTCACGCCCAGGTGGACGGCGTCGCCCAGCCCGATGCTGCCGGGCCCGCACGAGCGCCACGCGACGCGGGGC ACGACGCCGTTCGCGTACGCGACGCCGCACAGCAACGCGCCGCTGCAGGAGATCCGCCTCCCGCGCGGCGGCAGC ATGGCGCGCACCAGCCCGACGCGCGCGCCCGAGGCCGACTTGGAGACGGGCGAGAGCGAGTCGGAGGCGTCGTAC GGCCGAGGGCTCGGGTGGGCGATGATGGAGGAAGACGACGACGACGACGACGACGACGGCGACGACGACGACGAC GGGAGCGGCAGCGACGGCGAGGCCCCGGCGCGGCGGCAGCCGACAGCGCGGTCGTGGCAGCTGCCGGAGGACGAG CCGTGGCCGGGCATCGAAGACCGCGAGCAGGCGTCGGACGGGGAGAACATGGACCCGCGGGCGCGGCACGAGCCC GGCTCGGCGTCGGATGGCGAGGGCAGCAGCCAGCCGTCCGAGTACCCGAGCACGGACCGGGCGTGGCGCGACAGC GACGGGGCCGGCTTCCGCATCCACGAGGACGGCGCGTGA |